prot_M-pyrifera_M_contig107042.1506.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107042.1506.1
Unique Nameprot_M-pyrifera_M_contig107042.1506.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
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BLAST of mRNA_M-pyrifera_M_contig107042.1506.1 vs. uniprot
Match: UPI00138F234C (hypothetical protein n=1 Tax=Sphingomonas sp. Leaf28 TaxID=1735695 RepID=UPI00138F234C)

HSP 1 Score: 50.8 bits (120), Expect = 6.420e-7
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    1 MTIETGFDALMTFICVRLGYCGCVKREQAFDVTLLIPDRGVVTADQF 47
            MT    F AL+T +CV  G+CG V  ++   VT  +PDRG+VT DQF
Sbjct:    1 MTDREPFHALITEVCVERGWCGSVVDDRPMHVTDFLPDRGMVTVDQF 47
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107042.1506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00138F234C6.420e-748.94hypothetical protein n=1 Tax=Sphingomonas sp. Leaf... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107042contigM-pyrifera_M_contig107042:475..621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107042.1506.1mRNA_M-pyrifera_M_contig107042.1506.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107042 475..621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107042.1506.1 ID=prot_M-pyrifera_M_contig107042.1506.1|Name=mRNA_M-pyrifera_M_contig107042.1506.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
MTIETGFDALMTFICVRLGYCGCVKREQAFDVTLLIPDRGVVTADQFAE
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