prot_M-pyrifera_M_contig107033.1501.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107033.1501.1
Unique Nameprot_M-pyrifera_M_contig107033.1501.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107033.1501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 19..46
e-value: 3.8E-4
score: 29.8
coord: 75..102
e-value: 5.5E-4
score: 29.3
coord: 47..74
e-value: 6.8E-7
score: 38.9
coord: 1..18
e-value: 24.0
score: 7.5
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 2..55
coord: 32..114
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..114
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 1..13
e-value: 0.077
score: 13.1
coord: 74..97
e-value: 1.3E-5
score: 24.8
coord: 46..69
e-value: 4.4E-5
score: 23.2
coord: 22..41
e-value: 3.3E-5
score: 23.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..115
e-value: 5.5E-36
score: 125.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107033contigM-pyrifera_M_contig107033:60..587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107033.1501.1mRNA_M-pyrifera_M_contig107033.1501.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107033 60..587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107033.1501.1 ID=prot_M-pyrifera_M_contig107033.1501.1|Name=mRNA_M-pyrifera_M_contig107033.1501.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
DNDIGDDGVRALAAALEQDGVLTALNLRDNDIGADGARALAVTLEHNDSL
RSIRLRYNGIGDDGARALAAALEQNRSLTTLDITHNGISAEGTRALAAAL
EQNRTLMTLYLSVCQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf