prot_M-pyrifera_M_contig107014.1497.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107014.1497.1
Unique Nameprot_M-pyrifera_M_contig107014.1497.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length113
Homology
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: A0A7S4IAN6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IAN6_9EUKA)

HSP 1 Score: 155 bits (393), Expect = 6.030e-46
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIP 112
            MPKNKGKG            EG KR+LI+KE GQ EYA+V ++LGNCRV   CFDG ER CHVRGKFR++VWIN+DD+IL+GLRDYQDEKAD+IH+YS+DEAR L+++G +P
Sbjct:   21 MPKNKGKGGKSKRKGKNGGHEGSKRQLIIKEPGQ-EYAQVSRILGNCRVSAYCFDGVERMCHVRGKFRRRVWINRDDIILVGLRDYQDEKADIIHRYSLDEARTLKSLGELP 131          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: A0A7S4KQJ8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KQJ8_9EUKA)

HSP 1 Score: 150 bits (378), Expect = 3.420e-44
Identity = 76/112 (67.86%), Postives = 94/112 (83.93%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIP 112
            MPKNKGKG     XXXXX  EG+KREL++KEEGQ EYA+V+K+LGNCR +  CFDG+ R  HVRGKFRKKVWIN+DD+IL+GLRD+QD+K DVIH+Y+ DEAR+L+N G +P
Sbjct:    1 MPKNKGKGGKSKRXXXXXNDEGDKRELLMKEEGQ-EYAQVVKMLGNCRFEAFCFDGQTRIGHVRGKFRKKVWINRDDIILVGLRDFQDDKCDVIHRYTADEARRLKNKGELP 111          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: E4X515_OIKDI (Eukaryotic translation initiation factor 4C n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4X515_OIKDI)

HSP 1 Score: 140 bits (352), Expect = 3.140e-40
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKNKGKG            EG KRELILKE+GQ EYA+VLK+LGN R++  CFDG +R  H+RGK RK+ WIN  D+IL+GLRDYQD KADVI KY+ DEAR+L+NMGH+P+
Sbjct:    1 MPKNKGKGGKNRRRGKNEN-EGAKRELILKEDGQ-EYAQVLKMLGNGRLEAMCFDGTKRLAHIRGKLRKRQWINTQDIILVGLRDYQDAKADVIMKYNSDEARRLKNMGHLPE 111          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: A0A6A7GAV5_9CRUS (Eukaryotic translation initiation factor 4C n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GAV5_9CRUS)

HSP 1 Score: 139 bits (349), Expect = 4.090e-40
Identity = 70/113 (61.95%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKNKGKG            E  KREL LKEEGQ EYA+VL++LGN R++  CFDGK+R CH+RGK RKKVW+N+ D+IL+GLRD+QD KADVI KY+ DE+RQL+ MG +PD
Sbjct:    1 MPKNKGKGGKNRRRGKNENEE--KRELTLKEEGQ-EYAQVLRMLGNGRLESFCFDGKKRLCHIRGKMRKKVWVNQGDIILLGLRDFQDSKADVILKYNADESRQLKQMGELPD 110          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: A0A7S0L5F8_9EUKA (Eukaryotic translation initiation factor 4C n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5F8_9EUKA)

HSP 1 Score: 138 bits (347), Expect = 1.860e-39
Identity = 68/113 (60.18%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPK+KGKG            E  KRELILKE+GQ EYA+V+++LGN R+  +CFDGKER CH+RGK RKKVW+N+ D++LIGLRD+QD KADVI KYS +EAR+L+ +G +PD
Sbjct:   30 MPKSKGKGGKNRRRGKNDSEE--KRELILKEDGQ-EYAQVVRMLGNGRLTAQCFDGKERLCHIRGKMRKKVWVNQSDIVLIGLRDFQDNKADVILKYSAEEARRLKKLGELPD 139          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: M2XFN2_GALSU (Eukaryotic translation initiation factor 4C n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XFN2_GALSU)

HSP 1 Score: 136 bits (343), Expect = 3.450e-39
Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKNKGKG            E EKREL++KEEGQ EYA+V ++LGN R +  CFDG  R CH+RGK RKKVWIN  D++LIGLRDYQDEKAD+I KY+ DEAR L+  G IPD
Sbjct:    1 MPKNKGKGGKNRRRGKNDNEE-EKRELVMKEEGQ-EYAQVTRMLGNGRCEALCFDGTRRLCHIRGKMRKKVWINSGDIVLIGLRDYQDEKADIILKYNPDEARALKAQGEIPD 111          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: Q4SZY2_TETNG (Eukaryotic translation initiation factor 4C n=7 Tax=Tetraodontidae TaxID=31031 RepID=Q4SZY2_TETNG)

HSP 1 Score: 136 bits (343), Expect = 4.260e-39
Identity = 80/113 (70.80%), Postives = 94/113 (83.19%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKNKGKG XXXXXXXXXXX  EKREL+ KE+GQ EYA+VLK+LGN R++  CFDG +R CH+RGK RKKVWIN  D+IL+GLRDYQD KADVI KY++DEAR L+  G +PD
Sbjct:    1 MPKNKGKGGXXXXXXXXXXX-XEKRELVFKEDGQ-EYAQVLKMLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNLDEARSLKAYGELPD 111          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: A0A061H7W9_9BASI (Eukaryotic translation initiation factor 4C n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A061H7W9_9BASI)

HSP 1 Score: 136 bits (342), Expect = 6.420e-39
Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKN GKG            EGEKREL+ KEEGQ EYA+VLK+LGN R++ +CFDG++R  H+RGK RKKVWIN+ D+ILI LRD+QD+KADVI KY+ DEAR L+  G +P+
Sbjct:    1 MPKNSGKGGKNRRRGKNDT-EGEKRELVFKEEGQ-EYAQVLKMLGNGRLEAQCFDGEKRLAHIRGKLRKKVWINQGDIILISLRDFQDDKADVIQKYTADEARSLKQYGELPE 111          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: UPI0014557C2A (eukaryotic translation initiation factor 1A, X-chromosomal-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014557C2A)

HSP 1 Score: 135 bits (341), Expect = 7.380e-39
Identity = 80/113 (70.80%), Postives = 94/113 (83.19%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKNKGKG XXXXXXXXXXX  EKREL+ KE+GQ EYA+VLK+LGN R++  C DG ER CH+RGK RKKVWIN  D+IL+GLRDYQD+KADVI KYS DEAR L++ G +P+
Sbjct:    1 MPKNKGKGGXXXXXXXXXXX-XEKRELVFKEDGQ-EYAQVLKMLGNGRLKAHCLDGPERLCHIRGKLRKKVWINTGDIILVGLRDYQDDKADVILKYSTDEARYLKDYGELPE 111          
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Match: E9H4Z9_DAPPU (Eukaryotic translation initiation factor 4C n=2 Tax=Daphnia TaxID=6668 RepID=E9H4Z9_DAPPU)

HSP 1 Score: 135 bits (341), Expect = 9.670e-39
Identity = 70/113 (61.95%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    1 MPKNKGKGXXXXXXXXXXXXEGEKRELILKEEGQAEYAKVLKVLGNCRVQCECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMDEARQLRNMGHIPD 113
            MPKNKGKG            E EKRELI KE+GQ EYA+V K+LGN R++  CFDG +R CH+RGK RKKVWIN+ D+IL+GLRDYQD KADVI KY+ DEAR L+  G IP+
Sbjct:    1 MPKNKGKGGKNRRRGKNEN-EAEKRELIFKEDGQ-EYAQVTKMLGNGRLEALCFDGTKRLCHIRGKLRKKVWINQGDIILVGLRDYQDAKADVILKYNADEARNLKTYGEIPE 111          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107014.1497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IAN6_9EUKA6.030e-4664.29Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4KQJ8_9EUKA3.420e-4467.86Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
E4X515_OIKDI3.140e-4062.83Eukaryotic translation initiation factor 4C n=2 Ta... [more]
A0A6A7GAV5_9CRUS4.090e-4061.95Eukaryotic translation initiation factor 4C n=1 Ta... [more]
A0A7S0L5F8_9EUKA1.860e-3960.18Eukaryotic translation initiation factor 4C n=1 Ta... [more]
M2XFN2_GALSU3.450e-3961.95Eukaryotic translation initiation factor 4C n=1 Ta... [more]
Q4SZY2_TETNG4.260e-3970.80Eukaryotic translation initiation factor 4C n=7 Ta... [more]
A0A061H7W9_9BASI6.420e-3960.18Eukaryotic translation initiation factor 4C n=2 Ta... [more]
UPI0014557C2A7.380e-3970.80eukaryotic translation initiation factor 1A, X-chr... [more]
E9H4Z9_DAPPU9.670e-3961.95Eukaryotic translation initiation factor 4C n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 29..112
e-value: 6.3E-39
score: 145.3
IPR001253Translation initiation factor 1A (eIF-1A)PANTHERPTHR21668EIF-1Acoord: 1..113
IPR001253Translation initiation factor 1A (eIF-1A)HAMAPMF_00216aIF_1Acoord: 18..112
score: 18.434
NoneNo IPR availableGENE3D2.40.50.140coord: 2..113
e-value: 2.1E-43
score: 149.2
NoneNo IPR availablePRODOMPD005579coord: 55..111
e-value: 3.0E-17
score: 211.0
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 36..96
e-value: 1.4E-21
score: 76.1
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 23..98
score: 25.595
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107014contigM-pyrifera_M_contig107014:9..539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107014.1497.1mRNA_M-pyrifera_M_contig107014.1497.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107014 9..539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107014.1497.1 ID=prot_M-pyrifera_M_contig107014.1497.1|Name=mRNA_M-pyrifera_M_contig107014.1497.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
MPKNKGKGGKSKRKGKNKNREGEKRELILKEEGQAEYAKVLKVLGNCRVQ
CECFDGKERQCHVRGKFRKKVWINKDDVILIGLRDYQDEKADVIHKYSMD
EARQLRNMGHIPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001253TIF_eIF-1A
IPR006196RNA-binding_domain_S1_IF1
IPR012340NA-bd_OB-fold