prot_M-pyrifera_M_contig106458.1398.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106458.1398.1
Unique Nameprot_M-pyrifera_M_contig106458.1398.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length117
Homology
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A5A8CFX7_CAFRO (Rieske domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CFX7_CAFRO)

HSP 1 Score: 99.4 bits (246), Expect = 1.310e-22
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   10 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAG 105
            +ER I  + L   G R+C RL SGRGI+LL           +D ACYHHG PL+  DIE+ G  + IVCPWH+YKID+ TGEG+Y+ LD  ALAAG
Sbjct:   13 WERVIPDAALV-EGARKCARLASGRGIMLLRVEGKVH---CMDHACYHHGAPLLHADIEDLGDHKCIVCPWHNYKIDLATGEGVYVGLDSEALAAG 104          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A1W0A1C6_9STRA (Rieske domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1C6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.500e-22
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0
Query:   22 SGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLD 98
            +G RRC+ L SGR +LL+      +    IDQACYHHGGPL++GDIEE GG+  I CPWH+YKI +  GEG+Y+ LD
Sbjct:   14 NGSRRCIVLPSGRTVLLV---HHKNVVYCIDQACYHHGGPLLTGDIEEIGGKVAIKCPWHNYKIALENGEGLYMGLD 87          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A5D6XYH6_9STRA (Rieske domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYH6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.930e-22
Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   10 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 117
            +E   +L +L   G RRCV L S +  ++L+  +       +DQACYHHGGPL++GDIEE GG+  + CPWH+Y I V TGEG+Y+ +D A  A G  + +P  VKSK
Sbjct:   15 FEFVCKLEELP-EGARRCVLLPSSKRSVMLM--NLRGKIYCMDQACYHHGGPLMNGDIEEMGGKVTVKCPWHAYHIAVATGEGLYMGMDMALDAHGRSQPSPPKVKSK 119          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: T0QZF8_SAPDV (Rieske domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0QZF8_SAPDV)

HSP 1 Score: 93.6 bits (231), Expect = 7.260e-22
Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   22 SGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPA 100
            +G RRC+ L +GR +LL+           IDQACYHHGGPL++GDIEE GG+  I CPWH+YKI +  GEG+Y+ LD A
Sbjct:   15 NGARRCIVLPTGRTVLLV---HHAHVLYCIDQACYHHGGPLLTGDIEEIGGKVAISCPWHNYKIALENGEGLYMGLDAA 90          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: K3WGZ5_GLOUD (Rieske domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGZ5_GLOUD)

HSP 1 Score: 92.8 bits (229), Expect = 2.620e-21
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 0
Query:   23 GGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 117
            G R CV L S +  ++LL          +DQACYHHGGPL++GDIEE GG+  + CPWH+Y I V TGEG+Y+ +D A  + G  + +P  VKSK
Sbjct:   33 GSRHCVLLPSSKRSVMLLHIKGQI--YCMDQACYHHGGPLVNGDIEEMGGKVTVKCPWHAYHIAVETGEGLYMGMDMALDSKGRSQPSPPKVKSK 125          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A1V9ZR69_9STRA (Rieske domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR69_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.380e-21
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 0
Query:    9 EYERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLD 98
            ++E    ++ L  +G RRCV L +GR +LL+           IDQACYHHGGPL++GDIEE GG+  I CPWH+YKI +  GEG+Y+  D
Sbjct:    2 DFEAVCSVNDLP-NGSRRCVVLATGRTVLLV---HHKHALYCIDQACYHHGGPLLTGDIEELGGKVAISCPWHAYKIALDNGEGLYMGFD 87          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: W2QIR0_PHYPN (Rieske domain-containing protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QIR0_PHYPN)

HSP 1 Score: 91.3 bits (225), Expect = 5.800e-21
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   10 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 117
            YE   +LS+L  SG ++CV L +    ++LL  +       +DQACYHHGGPL++GDIEE GG+  I CPWH+Y+I V TGEG+Y  +D +   +G  + +   +KSK
Sbjct:    8 YEFVCKLSELP-SGSKKCVELPTSHRSVMLL--NIRGQVFCMDQACYHHGGPLVNGDIEELGGKVTIKCPWHAYQIAVETGEGLYKGVDMSMTPSGKLQPSSPRLKSK 112          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A225WIF7_9STRA (Rieske domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WIF7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 7.620e-21
Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 0
Query:   10 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPA 100
            YE   +LS++  SG ++C+ L++    ++LL  ++      +DQACYHHGGPL++GDIEE GG+  I CPWH+Y I V TGEG+Y  +D A
Sbjct:    8 YEFVCKLSEVP-SGAKKCIELQTSHRSVMLL--NTNGQVFCMDQACYHHGGPLVNGDIEELGGKVTIKCPWHAYHIAVETGEGLYKGVDMA 95          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: D0MRN5_PHYIT (Rieske domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0MRN5_PHYIT)

HSP 1 Score: 91.3 bits (225), Expect = 7.810e-21
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   10 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 117
            YE   +LS+L  SG ++CV L +    ++LL  +       +DQACYHHGGPL++GDIEE GG+ ++ CPWH+++I V TGEG+Y  +D     +G  + +   VKSK
Sbjct:    8 YEFVCKLSELP-SGSKKCVELPASHRSVMLL--NVRGQVFCMDQACYHHGGPLVNGDIEELGGKVILKCPWHAFRIAVETGEGLYKGVDMTMTPSGKLQPSSPRVKSK 112          
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: G4ZNX3_PHYSP (Rieske domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZNX3_PHYSP)

HSP 1 Score: 89.7 bits (221), Expect = 3.030e-20
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0
Query:   10 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 117
            YE   +L +L  SG ++CV L +    ++LL  +       +DQACYHHGGPL++GDIEE GG+  I CPWH+Y I V TGEG+Y  +D A   +G  + +   +KSK
Sbjct:    7 YEFVCKLLELP-SGSKKCVELPTSHRSVMLL--NIRGQVFCMDQACYHHGGPLVNGDIEEMGGKTTIKCPWHAYHIAVETGEGLYKGVDMAMTPSGKLQPSSPRLKSK 111          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CFX7_CAFRO1.310e-2253.13Rieske domain-containing protein n=4 Tax=Cafeteria... [more]
A0A1W0A1C6_9STRA2.500e-2255.84Rieske domain-containing protein n=1 Tax=Thraustot... [more]
A0A5D6XYH6_9STRA3.930e-2246.30Rieske domain-containing protein n=1 Tax=Pythium b... [more]
T0QZF8_SAPDV7.260e-2254.43Rieske domain-containing protein n=3 Tax=Saprolegn... [more]
K3WGZ5_GLOUD2.620e-2148.42Rieske domain-containing protein n=1 Tax=Globispor... [more]
A0A1V9ZR69_9STRA5.380e-2148.89Rieske domain-containing protein n=1 Tax=Achlya hy... [more]
W2QIR0_PHYPN5.800e-2144.44Rieske domain-containing protein n=8 Tax=Phytophth... [more]
A0A225WIF7_9STRA7.620e-2147.25Rieske domain-containing protein n=1 Tax=Phytophth... [more]
D0MRN5_PHYIT7.810e-2143.52Rieske domain-containing protein n=12 Tax=Phytopht... [more]
G4ZNX3_PHYSP3.030e-2044.44Rieske domain-containing protein n=3 Tax=Phytophth... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 46..92
e-value: 1.2E-5
score: 25.2
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 11..117
score: 11.558
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 9..117
e-value: 9.1E-23
score: 82.5
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 23..95
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 49..97
NoneNo IPR availablePANTHERPTHR21496:SF0RIESKE DOMAIN-CONTAINING PROTEINcoord: 49..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106458contigM-pyrifera_M_contig106458:276..626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106458.1398.1mRNA_M-pyrifera_M_contig106458.1398.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106458 276..626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106458.1398.1 ID=prot_M-pyrifera_M_contig106458.1398.1|Name=mRNA_M-pyrifera_M_contig106458.1398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp
MADGGGSGEYERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLA
IDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPA
ALAAGAGRSAPTTVKSK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf