mRNA_M-pyrifera_M_contig106458.1398.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A5A8CFX7_CAFRO (Rieske domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CFX7_CAFRO) HSP 1 Score: 99.4 bits (246), Expect = 1.310e-22 Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 28 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAG 315 +ER I + L G R+C RL SGRGI+LL +D ACYHHG PL+ DIE+ G + IVCPWH+YKID+ TGEG+Y+ LD ALAAG Sbjct: 13 WERVIPDAALV-EGARKCARLASGRGIMLLRVEGKVH---CMDHACYHHGAPLLHADIEDLGDHKCIVCPWHNYKIDLATGEGVYVGLDSEALAAG 104
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A1W0A1C6_9STRA (Rieske domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1C6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.500e-22 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 64 SGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLD 294 +G RRC+ L SGR +LL+ + IDQACYHHGGPL++GDIEE GG+ I CPWH+YKI + GEG+Y+ LD Sbjct: 14 NGSRRCIVLPSGRTVLLV---HHKNVVYCIDQACYHHGGPLLTGDIEEIGGKVAIKCPWHNYKIALENGEGLYMGLD 87
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A5D6XYH6_9STRA (Rieske domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYH6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.930e-22 Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 28 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 351 +E +L +L G RRCV L S + ++L+ + +DQACYHHGGPL++GDIEE GG+ + CPWH+Y I V TGEG+Y+ +D A A G + +P VKSK Sbjct: 15 FEFVCKLEELP-EGARRCVLLPSSKRSVMLM--NLRGKIYCMDQACYHHGGPLMNGDIEEMGGKVTVKCPWHAYHIAVATGEGLYMGMDMALDAHGRSQPSPPKVKSK 119
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: T0QZF8_SAPDV (Rieske domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0QZF8_SAPDV) HSP 1 Score: 93.6 bits (231), Expect = 7.260e-22 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1 Query: 64 SGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPA 300 +G RRC+ L +GR +LL+ IDQACYHHGGPL++GDIEE GG+ I CPWH+YKI + GEG+Y+ LD A Sbjct: 15 NGARRCIVLPTGRTVLLV---HHAHVLYCIDQACYHHGGPLLTGDIEEIGGKVAISCPWHNYKIALENGEGLYMGLDAA 90
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: K3WGZ5_GLOUD (Rieske domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGZ5_GLOUD) HSP 1 Score: 92.8 bits (229), Expect = 2.620e-21 Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 67 GGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 351 G R CV L S + ++LL +DQACYHHGGPL++GDIEE GG+ + CPWH+Y I V TGEG+Y+ +D A + G + +P VKSK Sbjct: 33 GSRHCVLLPSSKRSVMLLHIKGQI--YCMDQACYHHGGPLVNGDIEEMGGKVTVKCPWHAYHIAVETGEGLYMGMDMALDSKGRSQPSPPKVKSK 125
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A1V9ZR69_9STRA (Rieske domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR69_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 5.380e-21 Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 25 EYERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLD 294 ++E ++ L +G RRCV L +GR +LL+ IDQACYHHGGPL++GDIEE GG+ I CPWH+YKI + GEG+Y+ D Sbjct: 2 DFEAVCSVNDLP-NGSRRCVVLATGRTVLLV---HHKHALYCIDQACYHHGGPLLTGDIEELGGKVAISCPWHAYKIALDNGEGLYMGFD 87
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: W2QIR0_PHYPN (Rieske domain-containing protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QIR0_PHYPN) HSP 1 Score: 91.3 bits (225), Expect = 5.800e-21 Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 28 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 351 YE +LS+L SG ++CV L + ++LL + +DQACYHHGGPL++GDIEE GG+ I CPWH+Y+I V TGEG+Y +D + +G + + +KSK Sbjct: 8 YEFVCKLSELP-SGSKKCVELPTSHRSVMLL--NIRGQVFCMDQACYHHGGPLVNGDIEELGGKVTIKCPWHAYQIAVETGEGLYKGVDMSMTPSGKLQPSSPRLKSK 112
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: A0A225WIF7_9STRA (Rieske domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WIF7_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 7.620e-21 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 28 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPA 300 YE +LS++ SG ++C+ L++ ++LL ++ +DQACYHHGGPL++GDIEE GG+ I CPWH+Y I V TGEG+Y +D A Sbjct: 8 YEFVCKLSEVP-SGAKKCIELQTSHRSVMLL--NTNGQVFCMDQACYHHGGPLVNGDIEELGGKVTIKCPWHAYHIAVETGEGLYKGVDMA 95
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: D0MRN5_PHYIT (Rieske domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0MRN5_PHYIT) HSP 1 Score: 91.3 bits (225), Expect = 7.810e-21 Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 28 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 351 YE +LS+L SG ++CV L + ++LL + +DQACYHHGGPL++GDIEE GG+ ++ CPWH+++I V TGEG+Y +D +G + + VKSK Sbjct: 8 YEFVCKLSELP-SGSKKCVELPASHRSVMLL--NVRGQVFCMDQACYHHGGPLVNGDIEELGGKVILKCPWHAFRIAVETGEGLYKGVDMTMTPSGKLQPSSPRVKSK 112
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Match: G4ZNX3_PHYSP (Rieske domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZNX3_PHYSP) HSP 1 Score: 89.7 bits (221), Expect = 3.030e-20 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 28 YERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAIDQACYHHGGPLISGDIEECGGREVIVCPWHSYKIDVRTGEGIYLSLDPAALAAGAGRSAPTTVKSK 351 YE +L +L SG ++CV L + ++LL + +DQACYHHGGPL++GDIEE GG+ I CPWH+Y I V TGEG+Y +D A +G + + +KSK Sbjct: 7 YEFVCKLLELP-SGSKKCVELPTSHRSVMLL--NIRGQVFCMDQACYHHGGPLVNGDIEEMGGKTTIKCPWHAYHIAVETGEGLYKGVDMAMTPSGKLQPSSPRLKSK 111 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106458.1398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106458.1398.1 >prot_M-pyrifera_M_contig106458.1398.1 ID=prot_M-pyrifera_M_contig106458.1398.1|Name=mRNA_M-pyrifera_M_contig106458.1398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp MADGGGSGEYERTIELSQLRRSGGRRCVRLRSGRGILLLLPPSSPSTPLAback to top mRNA from alignment at M-pyrifera_M_contig106458:276..626+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106458.1398.1 ID=mRNA_M-pyrifera_M_contig106458.1398.1|Name=mRNA_M-pyrifera_M_contig106458.1398.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=351bp|location=Sequence derived from alignment at M-pyrifera_M_contig106458:276..626+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106458:276..626+ >mRNA_M-pyrifera_M_contig106458.1398.1 ID=mRNA_M-pyrifera_M_contig106458.1398.1|Name=mRNA_M-pyrifera_M_contig106458.1398.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig106458:276..626+ (Macrocystis pyrifera P11B4 male)back to top |