prot_M-pyrifera_M_contig10613.1326.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10613.1326.1
Unique Nameprot_M-pyrifera_M_contig10613.1326.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5KWE4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE4_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-9
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS+VE V SDNG EF    F ++ N   I++E TP  SP+++G  ER
Sbjct:   28 SFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 85          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.430e-9
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS+VE V SDNG EF    F ++ N   I++E TP  SP+++G  ER
Sbjct:  680 SFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 737          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.450e-9
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS+VE V SDNG EF    F ++ N   I++E TP  SP+++G  ER
Sbjct:  284 SFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 341          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.450e-9
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS+VE V SDNG EF    F ++ N   I++E TP  SP+++G  ER
Sbjct:  481 SFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAER 538          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.450e-9
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS+VE V SDNG EF    F ++ N   I++E TP  SP+++G  ER
Sbjct:  378 SFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAER 435          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: UPI001F3B8A25 (hypothetical protein n=1 Tax=Neisseria elongata TaxID=495 RepID=UPI001F3B8A25)

HSP 1 Score: 56.6 bits (135), Expect = 6.660e-9
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 AKFLSGIRADGCPSIVECVGSDNGTEF---LNAGFVALLNSHGIRREHTPIASPKHDGAVERRIACTLEL 67
            AKFL+G   D CP ++ECV SDNGTE+    N  F      +GI ++ T +A P+ +G  ER I   +E+
Sbjct:   10 AKFLTGHLIDPCPYLIECVYSDNGTEYKGSANHAFGVACYENGIGQKFTRVARPQTNGKAERAIRTLMEM 79          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5KKZ9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ9_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 7.730e-9
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL G+RADG PS+VE V SDNG E     F ++ N   I++E TP  SP+++G  ER
Sbjct:   28 SFLVGVRADGIPSLVEIVRSDNGGECFGGDFTSVCNELLIKQEFTPAYSPQYNGVAER 85          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5KN22_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN22_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 8.370e-9
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL G+RADG PS+VE V SDNG E     F ++ N   I++E TP  SP+++G  ER
Sbjct:   63 SFLVGVRADGIPSLVEIVRSDNGGECFGGDFTSVCNELLIKQEFTPAYSPQYNGVAER 120          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 8.540e-9
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS++E V SDNG EF    F ++ N   I++E TP  SP+ +G  ER
Sbjct:  525 SFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAER 582          
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 8.550e-9
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    2 KFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIASPKHDGAVER 59
             FL+ +RADG PS++E V SDNG EF    F ++ N   I++E TP  SP+ +G  ER
Sbjct:  501 SFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAER 558          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10613.1326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWE4_9PHAE1.760e-948.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE2.430e-948.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE2.450e-948.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.450e-948.28Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB16_9PHAE2.450e-948.28Integrase catalytic domain-containing protein n=1 ... [more]
UPI001F3B8A256.660e-941.43hypothetical protein n=1 Tax=Neisseria elongata Ta... [more]
A0A6H5KKZ9_9PHAE7.730e-948.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KN22_9PHAE8.370e-948.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K622_9PHAE8.540e-946.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE8.550e-946.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..67
e-value: 9.9E-9
score: 36.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..67
score: 9.708
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 13..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10613contigM-pyrifera_M_contig10613:5514..5714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10613.1326.1mRNA_M-pyrifera_M_contig10613.1326.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10613 5514..5714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10613.1326.1 ID=prot_M-pyrifera_M_contig10613.1326.1|Name=mRNA_M-pyrifera_M_contig10613.1326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
AKFLSGIRADGCPSIVECVGSDNGTEFLNAGFVALLNSHGIRREHTPIAS
PKHDGAVERRIACTLEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf