prot_M-pyrifera_M_contig106033.1303.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106033.1303.1
Unique Nameprot_M-pyrifera_M_contig106033.1303.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length156
Homology
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BLAST of mRNA_M-pyrifera_M_contig106033.1303.1 vs. uniprot
Match: A0A7S1UJW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJW6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.460e-15
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 0 
Query:   47 ALRKALARNSTLVHVDMRINNFTETDRMHLARGLAHNHTLLGLHAGGSSRGVDPRGFITSSDKDAFKSNPEELHAAVFTRIVGLRTQGGEEWGEKDNCWICEKWR 151
            AL K+L +N TL H+++  N  +E D   +A+ L  NH L+GLH  G+   VD  GF+   D + + S  E  H   FTRI+  +  G E W ++ NCW+CEKWR
Sbjct:  565 ALAKSLRQNKTLTHLNVGHNQLSERDCRLMAQCLRENHILMGLHVEGNYAEVDAHGFLIP-DAEVWPS--ETSHC--FTRILAPQVVGRENWSQRSNCWLCEKWR 664
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106033.1303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1UJW6_9STRA2.460e-1540.95Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 25..37
e-value: 0.25
score: 11.5
coord: 1..16
e-value: 0.14
score: 12.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..125
e-value: 2.2E-16
score: 61.3
NoneNo IPR availablePANTHERPTHR24114:SF30LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74Acoord: 1..99
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 1..99
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106033contigM-pyrifera_M_contig106033:16..483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106033.1303.1mRNA_M-pyrifera_M_contig106033.1303.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106033 16..483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106033.1303.1 ID=prot_M-pyrifera_M_contig106033.1303.1|Name=mRNA_M-pyrifera_M_contig106033.1303.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
LDVSWNKLSGDGAIRFSIGLQQAASLETLDMSWNGFGASPDAAVSKALRK
ALARNSTLVHVDMRINNFTETDRMHLARGLAHNHTLLGLHAGGSSRGVDP
RGFITSSDKDAFKSNPEELHAAVFTRIVGLRTQGGEEWGEKDNCWICEKW
RESKYV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf