prot_M-pyrifera_M_contig106020.1295.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig106020.1295.1
Unique Name	prot_M-pyrifera_M_contig106020.1295.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	157

Homology

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: R7QQL7_CHOCR (Putative ATP dependent DNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQL7_CHOCR)

HSP 1 Score: 268 bits (685), Expect = 3.420e-85
Identity = 124/154 (80.52%), Postives = 140/154 (90.91%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLVDR 154
            +EGLMIKD+SS YVSG PKHAWYKWK DP LLDAVLMYA+RG GKRSS+YSDYTFGLW  DG LLPIGKAYFGFTDEELK++D W+R+HKLQRFGPVQEVEKELVFEVA+D+AQ S RHKSGYALRFPRI RIRWDKPA+EA+++ +LAKLV +
Sbjct:  381 IEGLMIKDMSSVYVSGRPKHAWYKWKRDPFLLDAVLMYARRGTGKRSSFYSDYTFGLWGEDGTLLPIGKAYFGFTDEELKKIDNWVRSHKLQRFGPVQEVEKELVFEVAFDAAQISKRHKSGYALRFPRIHRIRWDKPAAEADKIVNLAKLVGK 534

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI0003F83C72 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003F83C72)

HSP 1 Score: 266 bits (680), Expect = 1.690e-84
Identity = 124/152 (81.58%), Postives = 136/152 (89.47%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EGLMIKD+SS YVSG PKHAWYKWK DP LLDAVLMYA+RG GKRSSYYSDYTFGLW  DG+LLPIGKAYFGFTDEELK++D W+RNHKLQRFGPVQEVEK LVFEVA+DSAQ S RHKSGYALRFPRI RIRWDKPA+EA++L  L  L+
Sbjct:  376 IEGLMIKDVSSIYVSGRPKHAWYKWKRDPFLLDAVLMYARRGTGKRSSYYSDYTFGLWNEDGELLPIGKAYFGFTDEELKEIDKWVRNHKLQRFGPVQEVEKGLVFEVAFDSAQESKRHKSGYALRFPRIHRIRWDKPAAEADKLSSLEALI 527

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI0016775EE6 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016775EE6)

HSP 1 Score: 260 bits (664), Expect = 4.790e-82
Identity = 121/152 (79.61%), Postives = 135/152 (88.82%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EGLMIKD+SS Y SG PKHAWYKWK DP LLDAVLMYA+RG GKRSS+YSDYTFGLW+ D  LLPIGKAYFGFTDEELK++D W+R +KLQRFGPVQEVEK LVFEVA+D+AQ S RHKSGYALRFPRI RIRWDKPA EA+++E LAKLV
Sbjct:  381 IEGLMIKDVSSVYASGRPKHAWYKWKRDPFLLDAVLMYARRGTGKRSSFYSDYTFGLWSDDDTLLPIGKAYFGFTDEELKKIDNWVRANKLQRFGPVQEVEKALVFEVAFDAAQVSTRHKSGYALRFPRIHRIRWDKPADEADRIETLAKLV 532

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI000378BA48 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000378BA48)

HSP 1 Score: 259 bits (662), Expect = 8.200e-82
Identity = 122/152 (80.26%), Postives = 133/152 (87.50%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EGLMIKD SS YV G PKH WYKWK DP LLDAVLMYAQRG GKRSSYYSDYTFGLW  + +LLPIGKAYFGFTDEELK++D WIRNHKL RFGPVQEVEKELVFEVA+DSA  SARHKSGYALRFPRI RIRWDKPA+EA++L  +A L+
Sbjct:  375 IEGLMIKDKSSLYVPGRPKHGWYKWKRDPFLLDAVLMYAQRGTGKRSSYYSDYTFGLWNEEDKLLPIGKAYFGFTDEELKEIDKWIRNHKLARFGPVQEVEKELVFEVAFDSAHESARHKSGYALRFPRIHRIRWDKPAAEADRLTAIAALI 526

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A8J3G1E1_9PROT (DNA ligase (ATP) n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G1E1_9PROT)

HSP 1 Score: 255 bits (652), Expect = 2.990e-80
Identity = 121/156 (77.56%), Postives = 135/156 (86.54%), Query Frame = 0

Query:    2 EGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWA---GDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLVDR 154
            EGLM+K   + YVSG PKHAWYKWK DP LLDAVLMYAQRG GKRSSYYSDYTFGLWA   G+ +LLPIGKAYFGFTDEELKQLD+WIRNHK+ R+GPVQEV+KELVFEVA+DSA  S RHKSGYALRFPRISRIRWDKPA EA++LE +  L+ +
Sbjct:  379 EGLMVKRRDTPYVSGRPKHAWYKWKRDPFLLDAVLMYAQRGTGKRSSYYSDYTFGLWANVEGEAKLLPIGKAYFGFTDEELKQLDSWIRNHKVARYGPVQEVDKELVFEVAFDSAHESPRHKSGYALRFPRISRIRWDKPAHEADRLEIMDTLIGK 534

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A378LQJ9_9GAMM (DNA ligase (ATP) n=1 Tax=Legionella wadsworthii TaxID=28088 RepID=A0A378LQJ9_9GAMM)

HSP 1 Score: 243 bits (620), Expect = 1.490e-75
Identity = 112/152 (73.68%), Postives = 128/152 (84.21%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EG+M+K  SS Y++G PK  WYKWK DPHL+DA+LMYAQRGHGKRSSYYSDYTFGLW+   QLLPIGKAYFGFTDEEL QLD WIR H L  FGPV+EV+KELV E+A+D+  TS RHKSG ALRFPRI+RIRWDKP  EA+QLEDL KL+
Sbjct:  372 VEGIMLKKNSSLYLAGRPKGCWYKWKKDPHLIDAILMYAQRGHGKRSSYYSDYTFGLWS-QNQLLPIGKAYFGFTDEELYQLDKWIRYHTLNHFGPVREVQKELVLEIAFDAVNTSNRHKSGVALRFPRINRIRWDKPPEEADQLEDLKKLI 522

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A378J159_9GAMM (DNA ligase (ATP) n=2 Tax=Legionella TaxID=445 RepID=A0A378J159_9GAMM)

HSP 1 Score: 240 bits (612), Expect = 2.230e-74
Identity = 111/152 (73.03%), Postives = 132/152 (86.84%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EGLMIK+  S Y++G P   WYKWK DP ++DAVLMYAQRGHGKRSSYYSDYTFGLW  +G+LLPIGKAYFGFTDEEL+QLD WIRN+ + RFGPV+EV+KELVFEVA+D+   S+RHKSG ALRFPRI+RIRWDKPA EA+QL+ L+KL+
Sbjct:  373 VEGLMIKNKQSPYLAGRPMGHWYKWKRDPLIIDAVLMYAQRGHGKRSSYYSDYTFGLWQ-EGELLPIGKAYFGFTDEELRQLDQWIRNNTIHRFGPVREVKKELVFEVAFDAVNLSSRHKSGLALRFPRINRIRWDKPAEEADQLKTLSKLM 523

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A7G4RF43_9GAMM (DNA ligase (ATP) n=1 Tax=Legionella sp. PC997 TaxID=2755562 RepID=A0A7G4RF43_9GAMM)

HSP 1 Score: 239 bits (611), Expect = 3.140e-74
Identity = 112/152 (73.68%), Postives = 129/152 (84.87%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EGLM+K  SS Y++G PK  WYKWK DP+++DA+LMYAQRGHGKRSSYYSDYTFGLW  + QLLPIGKAYFGFTDEEL QLD WIR+H L RFGPV+EVEKELV E+A+D+   S RHKSG ALRFPRI+RIRWDKPA EA+QLE L KL+
Sbjct:  372 VEGLMLKKKSSLYLAGRPKGCWYKWKKDPYIIDAILMYAQRGHGKRSSYYSDYTFGLWKLN-QLLPIGKAYFGFTDEELYQLDKWIRSHTLNRFGPVREVEKELVLEIAFDAVHWSNRHKSGVALRFPRINRIRWDKPAHEADQLETLKKLI 522

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A4Q3JHD8_9HYPH (DNA ligase (ATP) (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3JHD8_9HYPH)

HSP 1 Score: 231 bits (588), Expect = 7.150e-74
Identity = 105/147 (71.43%), Postives = 127/147 (86.39%), Query Frame = 0

Query:    2 EGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDL 148
            EG+M+K  +S YV G PK  WYKWK DP+++DA+LMYAQRGHGKRSS+YSDYTFG+W G+ +++PIGKAYFGFTDEELKQLD W+RN+ +  FGPV+EV+KELVFEVA+DSAQ S RHKSG ALRFPRI+RIRWDKPA EA  L+D+
Sbjct:  115 EGVMVKLRTSPYVPGRPKGLWYKWKRDPNVVDAILMYAQRGHGKRSSFYSDYTFGVWKGN-EIVPIGKAYFGFTDEELKQLDKWVRNNTVASFGPVREVKKELVFEVAFDSAQESTRHKSGVALRFPRINRIRWDKPAGEAATLQDM 260

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BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI001BDF211E (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Glaciecola sp. XM2 TaxID=1914931 RepID=UPI001BDF211E)

HSP 1 Score: 232 bits (592), Expect = 8.540e-74
Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 0

Query:    1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 152
            +EGLM+K  +++YV+G PK  WYKWK DP L+DAV+MYAQRGHGKRSS+YSDYTFG W  DG+LLPIGKAY GFTD ELK+LD W+R H + RFGPV+EV+KELVFEVA+DS   S RHKSG ALRFPRI RIRWDKPA EA+QLE L  ++
Sbjct:  168 IEGLMLKRKNTTYVAGRPKGQWYKWKRDPRLIDAVIMYAQRGHGKRSSFYSDYTFGCWQ-DGKLLPIGKAYSGFTDAELKRLDNWVRKHTIGRFGPVKEVKKELVFEVAFDSVHPSNRHKSGVALRFPRIHRIRWDKPADEADQLETLKMMI 318

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7QQL7_CHOCR	3.420e-85	80.52	Putative ATP dependent DNA ligase n=1 Tax=Chondrus...	[more]
UPI0003F83C72	1.690e-84	81.58	cisplatin damage response ATP-dependent DNA ligase...	[more]
UPI0016775EE6	4.790e-82	79.61	cisplatin damage response ATP-dependent DNA ligase...	[more]
UPI000378BA48	8.200e-82	80.26	cisplatin damage response ATP-dependent DNA ligase...	[more]
A0A8J3G1E1_9PROT	2.990e-80	77.56	DNA ligase (ATP) n=1 Tax=Algimonas arctica TaxID=1...	[more]
A0A378LQJ9_9GAMM	1.490e-75	73.68	DNA ligase (ATP) n=1 Tax=Legionella wadsworthii Ta...	[more]
A0A378J159_9GAMM	2.230e-74	73.03	DNA ligase (ATP) n=2 Tax=Legionella TaxID=445 RepI...	[more]
A0A7G4RF43_9GAMM	3.140e-74	73.68	DNA ligase (ATP) n=1 Tax=Legionella sp. PC997 TaxI...	[more]
A0A4Q3JHD8_9HYPH	7.150e-74	71.43	DNA ligase (ATP) (Fragment) n=1 Tax=Hyphomicrobial...	[more]
UPI001BDF211E	8.540e-74	70.39	cisplatin damage response ATP-dependent DNA ligase...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 30..156 e-value: 1.1E-32 score: 115.0
None	No IPR available	PANTHER	PTHR45674	FAMILY NOT NAMED	coord: 1..152
None	No IPR available	PANTHER	PTHR45674:SF9		coord: 1..152
None	No IPR available	SUPERFAMILY	56091	DNA ligase/mRNA capping enzyme, catalytic domain	coord: 2..27
IPR012309	DNA ligase, ATP-dependent, C-terminal	PFAM	PF04679	DNA_ligase_A_C	coord: 47..137 e-value: 1.6E-12 score: 47.9
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 32..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig106020	contig	M-pyrifera_M_contig106020:159..629 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig106020.1295.1	mRNA_M-pyrifera_M_contig106020.1295.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig106020 159..629 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig106020.1295.1 ID=prot_M-pyrifera_M_contig106020.1295.1|Name=mRNA_M-pyrifera_M_contig106020.1295.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYY
SDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEV
EKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAK
LVDRAT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012309	DNA_ligase_ATP-dep_C
IPR012340	NA-bd_OB-fold