mRNA_M-pyrifera_M_contig106020.1295.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: R7QQL7_CHOCR (Putative ATP dependent DNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQL7_CHOCR) HSP 1 Score: 268 bits (685), Expect = 3.420e-85 Identity = 124/154 (80.52%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLVDR 462
+EGLMIKD+SS YVSG PKHAWYKWK DP LLDAVLMYA+RG GKRSS+YSDYTFGLW DG LLPIGKAYFGFTDEELK++D W+R+HKLQRFGPVQEVEKELVFEVA+D+AQ S RHKSGYALRFPRI RIRWDKPA+EA+++ +LAKLV +
Sbjct: 381 IEGLMIKDMSSVYVSGRPKHAWYKWKRDPFLLDAVLMYARRGTGKRSSFYSDYTFGLWGEDGTLLPIGKAYFGFTDEELKKIDNWVRSHKLQRFGPVQEVEKELVFEVAFDAAQISKRHKSGYALRFPRIHRIRWDKPAAEADKIVNLAKLVGK 534
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI0003F83C72 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003F83C72) HSP 1 Score: 266 bits (680), Expect = 1.690e-84 Identity = 124/152 (81.58%), Postives = 136/152 (89.47%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EGLMIKD+SS YVSG PKHAWYKWK DP LLDAVLMYA+RG GKRSSYYSDYTFGLW DG+LLPIGKAYFGFTDEELK++D W+RNHKLQRFGPVQEVEK LVFEVA+DSAQ S RHKSGYALRFPRI RIRWDKPA+EA++L L L+
Sbjct: 376 IEGLMIKDVSSIYVSGRPKHAWYKWKRDPFLLDAVLMYARRGTGKRSSYYSDYTFGLWNEDGELLPIGKAYFGFTDEELKEIDKWVRNHKLQRFGPVQEVEKGLVFEVAFDSAQESKRHKSGYALRFPRIHRIRWDKPAAEADKLSSLEALI 527
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI0016775EE6 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016775EE6) HSP 1 Score: 260 bits (664), Expect = 4.790e-82 Identity = 121/152 (79.61%), Postives = 135/152 (88.82%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EGLMIKD+SS Y SG PKHAWYKWK DP LLDAVLMYA+RG GKRSS+YSDYTFGLW+ D LLPIGKAYFGFTDEELK++D W+R +KLQRFGPVQEVEK LVFEVA+D+AQ S RHKSGYALRFPRI RIRWDKPA EA+++E LAKLV
Sbjct: 381 IEGLMIKDVSSVYASGRPKHAWYKWKRDPFLLDAVLMYARRGTGKRSSFYSDYTFGLWSDDDTLLPIGKAYFGFTDEELKKIDNWVRANKLQRFGPVQEVEKALVFEVAFDAAQVSTRHKSGYALRFPRIHRIRWDKPADEADRIETLAKLV 532
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI000378BA48 (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000378BA48) HSP 1 Score: 259 bits (662), Expect = 8.200e-82 Identity = 122/152 (80.26%), Postives = 133/152 (87.50%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EGLMIKD SS YV G PKH WYKWK DP LLDAVLMYAQRG GKRSSYYSDYTFGLW + +LLPIGKAYFGFTDEELK++D WIRNHKL RFGPVQEVEKELVFEVA+DSA SARHKSGYALRFPRI RIRWDKPA+EA++L +A L+
Sbjct: 375 IEGLMIKDKSSLYVPGRPKHGWYKWKRDPFLLDAVLMYAQRGTGKRSSYYSDYTFGLWNEEDKLLPIGKAYFGFTDEELKEIDKWIRNHKLARFGPVQEVEKELVFEVAFDSAHESARHKSGYALRFPRIHRIRWDKPAAEADRLTAIAALI 526
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A8J3G1E1_9PROT (DNA ligase (ATP) n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G1E1_9PROT) HSP 1 Score: 255 bits (652), Expect = 2.990e-80 Identity = 121/156 (77.56%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 4 EGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWA---GDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLVDR 462
EGLM+K + YVSG PKHAWYKWK DP LLDAVLMYAQRG GKRSSYYSDYTFGLWA G+ +LLPIGKAYFGFTDEELKQLD+WIRNHK+ R+GPVQEV+KELVFEVA+DSA S RHKSGYALRFPRISRIRWDKPA EA++LE + L+ +
Sbjct: 379 EGLMVKRRDTPYVSGRPKHAWYKWKRDPFLLDAVLMYAQRGTGKRSSYYSDYTFGLWANVEGEAKLLPIGKAYFGFTDEELKQLDSWIRNHKVARYGPVQEVDKELVFEVAFDSAHESPRHKSGYALRFPRISRIRWDKPAHEADRLEIMDTLIGK 534
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A378LQJ9_9GAMM (DNA ligase (ATP) n=1 Tax=Legionella wadsworthii TaxID=28088 RepID=A0A378LQJ9_9GAMM) HSP 1 Score: 243 bits (620), Expect = 1.490e-75 Identity = 112/152 (73.68%), Postives = 128/152 (84.21%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EG+M+K SS Y++G PK WYKWK DPHL+DA+LMYAQRGHGKRSSYYSDYTFGLW+ QLLPIGKAYFGFTDEEL QLD WIR H L FGPV+EV+KELV E+A+D+ TS RHKSG ALRFPRI+RIRWDKP EA+QLEDL KL+
Sbjct: 372 VEGIMLKKNSSLYLAGRPKGCWYKWKKDPHLIDAILMYAQRGHGKRSSYYSDYTFGLWS-QNQLLPIGKAYFGFTDEELYQLDKWIRYHTLNHFGPVREVQKELVLEIAFDAVNTSNRHKSGVALRFPRINRIRWDKPPEEADQLEDLKKLI 522
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A378J159_9GAMM (DNA ligase (ATP) n=2 Tax=Legionella TaxID=445 RepID=A0A378J159_9GAMM) HSP 1 Score: 240 bits (612), Expect = 2.230e-74 Identity = 111/152 (73.03%), Postives = 132/152 (86.84%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EGLMIK+ S Y++G P WYKWK DP ++DAVLMYAQRGHGKRSSYYSDYTFGLW +G+LLPIGKAYFGFTDEEL+QLD WIRN+ + RFGPV+EV+KELVFEVA+D+ S+RHKSG ALRFPRI+RIRWDKPA EA+QL+ L+KL+
Sbjct: 373 VEGLMIKNKQSPYLAGRPMGHWYKWKRDPLIIDAVLMYAQRGHGKRSSYYSDYTFGLWQ-EGELLPIGKAYFGFTDEELRQLDQWIRNNTIHRFGPVREVKKELVFEVAFDAVNLSSRHKSGLALRFPRINRIRWDKPAEEADQLKTLSKLM 523
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A7G4RF43_9GAMM (DNA ligase (ATP) n=1 Tax=Legionella sp. PC997 TaxID=2755562 RepID=A0A7G4RF43_9GAMM) HSP 1 Score: 239 bits (611), Expect = 3.140e-74 Identity = 112/152 (73.68%), Postives = 129/152 (84.87%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EGLM+K SS Y++G PK WYKWK DP+++DA+LMYAQRGHGKRSSYYSDYTFGLW + QLLPIGKAYFGFTDEEL QLD WIR+H L RFGPV+EVEKELV E+A+D+ S RHKSG ALRFPRI+RIRWDKPA EA+QLE L KL+
Sbjct: 372 VEGLMLKKKSSLYLAGRPKGCWYKWKKDPYIIDAILMYAQRGHGKRSSYYSDYTFGLWKLN-QLLPIGKAYFGFTDEELYQLDKWIRSHTLNRFGPVREVEKELVLEIAFDAVHWSNRHKSGVALRFPRINRIRWDKPAHEADQLETLKKLI 522
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: A0A4Q3JHD8_9HYPH (DNA ligase (ATP) (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3JHD8_9HYPH) HSP 1 Score: 231 bits (588), Expect = 7.150e-74 Identity = 105/147 (71.43%), Postives = 127/147 (86.39%), Query Frame = 1
Query: 4 EGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDL 444
EG+M+K +S YV G PK WYKWK DP+++DA+LMYAQRGHGKRSS+YSDYTFG+W G+ +++PIGKAYFGFTDEELKQLD W+RN+ + FGPV+EV+KELVFEVA+DSAQ S RHKSG ALRFPRI+RIRWDKPA EA L+D+
Sbjct: 115 EGVMVKLRTSPYVPGRPKGLWYKWKRDPNVVDAILMYAQRGHGKRSSFYSDYTFGVWKGN-EIVPIGKAYFGFTDEELKQLDKWVRNNTVASFGPVREVKKELVFEVAFDSAQESTRHKSGVALRFPRINRIRWDKPAGEAATLQDM 260
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Match: UPI001BDF211E (cisplatin damage response ATP-dependent DNA ligase n=1 Tax=Glaciecola sp. XM2 TaxID=1914931 RepID=UPI001BDF211E) HSP 1 Score: 232 bits (592), Expect = 8.540e-74 Identity = 107/152 (70.39%), Postives = 126/152 (82.89%), Query Frame = 1
Query: 1 MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYSDYTFGLWAGDGQLLPIGKAYFGFTDEELKQLDTWIRNHKLQRFGPVQEVEKELVFEVAYDSAQTSARHKSGYALRFPRISRIRWDKPASEANQLEDLAKLV 456
+EGLM+K +++YV+G PK WYKWK DP L+DAV+MYAQRGHGKRSS+YSDYTFG W DG+LLPIGKAY GFTD ELK+LD W+R H + RFGPV+EV+KELVFEVA+DS S RHKSG ALRFPRI RIRWDKPA EA+QLE L ++
Sbjct: 168 IEGLMLKRKNTTYVAGRPKGQWYKWKRDPRLIDAVIMYAQRGHGKRSSFYSDYTFGCWQ-DGKLLPIGKAYSGFTDAELKRLDNWVRKHTIGRFGPVKEVKKELVFEVAFDSVHPSNRHKSGVALRFPRIHRIRWDKPADEADQLETLKMMI 318 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106020.1295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106020.1295.1 >prot_M-pyrifera_M_contig106020.1295.1 ID=prot_M-pyrifera_M_contig106020.1295.1|Name=mRNA_M-pyrifera_M_contig106020.1295.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp MEGLMIKDLSSSYVSGGPKHAWYKWKYDPHLLDAVLMYAQRGHGKRSSYYback to top mRNA from alignment at M-pyrifera_M_contig106020:159..629- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106020.1295.1 ID=mRNA_M-pyrifera_M_contig106020.1295.1|Name=mRNA_M-pyrifera_M_contig106020.1295.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig106020:159..629- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106020:159..629- >mRNA_M-pyrifera_M_contig106020.1295.1 ID=mRNA_M-pyrifera_M_contig106020.1295.1|Name=mRNA_M-pyrifera_M_contig106020.1295.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig106020:159..629- (Macrocystis pyrifera P11B4 male)back to top |