prot_M-pyrifera_M_contig1059.1260.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1059.1260.1
Unique Nameprot_M-pyrifera_M_contig1059.1260.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
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BLAST of mRNA_M-pyrifera_M_contig1059.1260.1 vs. uniprot
Match: D7G1A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 5.390e-26
Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 0 
Query:   11 RSTRTINTWQRSARGVNNGDEDEPYIIPGSGLRGVDTSKLTGSDKRDAEWFQRTAEREASGQLQWFEDPVTYIALFALVPVLIGVWGVLNCYIPGFC 107
            RS+   +  +R   G ++GD  +  ++ GSGLRGVDTSKLTG++KRDA+WF RT  RE    L WFEDPV Y+ L  +VPV+  VWG LNCY+PG C
Sbjct:   19 RSSWATSATKRGKEGDDDGDRID--MLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGALNCYVPGIC 109
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BLAST of mRNA_M-pyrifera_M_contig1059.1260.1 vs. uniprot
Match: A0A6H5KI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI54_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 7.110e-25
Identity = 52/96 (54.17%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   17 NTWQRSA--RGVNNGDEDEPY---IIPGSGLRGVDTSKLTGSDKRDAEWFQRTAEREASGQLQWFEDPVTYIALFALVPVLIGVWGVLNCYIPGFC 107
            N+W   A  RG  + D+D+     ++ GSGLRGVDTSKLTG++KRDA+WF RT  RE    L WFEDPV Y+ L  +VPV+  VWG  NCY+PG C
Sbjct:   74 NSWATRATKRGNTSNDDDDIDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGAFNCYVPGIC 165
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1059.1260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1A0_ECTSI5.390e-2653.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI54_9PHAE7.110e-2554.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..103
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1059contigM-pyrifera_M_contig1059:14555..14887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1059.1260.1mRNA_M-pyrifera_M_contig1059.1260.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1059 14555..15801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1059.1260.1 ID=prot_M-pyrifera_M_contig1059.1260.1|Name=mRNA_M-pyrifera_M_contig1059.1260.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
MSHPAGRESTRSTRTINTWQRSARGVNNGDEDEPYIIPGSGLRGVDTSKL
TGSDKRDAEWFQRTAEREASGQLQWFEDPVTYIALFALVPVLIGVWGVLN
CYIPGFCSPN*
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