prot_M-pyrifera_M_contig105810.1245.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105810.1245.1
Unique Nameprot_M-pyrifera_M_contig105810.1245.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A3Q9NJG8_9GAMM (Histidine kinase n=2 Tax=Marinobacter sp. NP-4(2019) TaxID=2488665 RepID=A0A3Q9NJG8_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 4.200e-7
Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 0
Query:    5 ICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            + +RML  LG  V     G+EAV    R +L E      +D H+  G+ G +  + LR   F  PI+  T G  Q ++ A  +AG DG ++KP +KDHL
Sbjct:  975 LVERMLRRLGLEVITVTCGDEAV----RVALSESVRLVLMDRHM-PGLDGVEATRMLRKTGFRRPIIAFTAG-DQQEIEALQNAGCDGALNKPIDKDHL 1067          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A0P7DQK7_9GAMM (Histidine kinase n=15 Tax=Bacteria TaxID=2 RepID=A0A0P7DQK7_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 4.970e-6
Identity = 32/106 (30.19%), Postives = 53/106 (50.00%), Query Frame = 0
Query:    4 SICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGP------ILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            S+ + ML  LG  V+  + GE+A+E++ + S D      F+D  +   + G +  +  R    E P      I+  T  + Q D   C++AG  G++HKPF +D L
Sbjct:  499 SLARAMLEYLGQQVTVVEDGEQALEWLAQASNDV--DLVFMDMQMPV-LDGVETTRRWRQHESEQPASARLPIIAMTANVMQEDARRCIEAGMQGVLHKPFTRDDL 601          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A4U1LSG2_COBMA (Histidine kinase n=7 Tax=Cobetia TaxID=204286 RepID=A0A4U1LSG2_COBMA)

HSP 1 Score: 52.8 bits (125), Expect = 9.260e-6
Identity = 31/105 (29.52%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    4 SICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG-----PILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            S+ + ML  LG  V+  + GE+A+ ++ +   D      F+D  +   + G +  +  R    E      PI+  T  + Q D   C++AG DG++HKPF +D L
Sbjct:  499 SLARAMLEYLGQQVTIVEEGEQALAWLSQA--DHEVDLIFMDMQMPV-LDGLETTRRWRQREAEASATRLPIIAMTANVMQEDARRCIEAGMDGVLHKPFTRDDL 600          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: UPI001581ABA6 (response regulator n=1 Tax=Halomonas taeanensis TaxID=284577 RepID=UPI001581ABA6)

HSP 1 Score: 50.8 bits (120), Expect = 9.540e-6
Identity = 33/108 (30.56%), Postives = 53/108 (49.07%), Query Frame = 0
Query:    4 SICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLR--------SARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            S+ + ML  LG  V+  + G +A+E++ +   D      F+D  +   + G +  +  R        SAR   PI+  T  + Q D   C+DAG  G++HKPF +D L
Sbjct:    8 SLARAMLEYLGQQVTVVEDGGQALEWLAQAGNDV--DLVFMDMQMPV-LDGVETTRRWRHHEAEQPASARL--PIIAMTANVMQEDARRCIDAGMQGVLHKPFTRDDL 110          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A3T0K463_9GAMM (Histidine kinase n=1 Tax=Cobetia sp. ICG0124 TaxID=2053669 RepID=A0A3T0K463_9GAMM)

HSP 1 Score: 52.0 bits (123), Expect = 1.720e-5
Identity = 31/105 (29.52%), Postives = 52/105 (49.52%), Query Frame = 0
Query:    4 SICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG-----PILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            S+ + ML  LG  V+  + GE+A+ ++ +   D      F+D  +   + G +  +  R    E      PI+  T  + Q D   C++AG DG++HKPF +D L
Sbjct:  499 SLARAMLEYLGQQVTIVEEGEQALAWLSQA--DHEVDLIFMDMQMPV-LDGLETTRRWRQREAETSATRLPIIAMTANVMQEDARRCIEAGMDGVLHKPFTRDDL 600          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A643F3S2_IDEDE (Response regulator n=2 Tax=Ideonella dechloratans TaxID=36863 RepID=A0A643F3S2_IDEDE)

HSP 1 Score: 50.1 bits (118), Expect = 2.260e-5
Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = 0
Query:    5 ICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRS-----ARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            + + ML++LG S +  + GEEAV+      +D +     +D H+  G+ G +  + LR+      R   P++  TGG    D  ACL AG DG + KPF  + L
Sbjct:   32 VAQAMLASLGVSCTLAEDGEEAVQCAATVEVDLI----LMDLHM-PGLDGLEATRQLRAQAAAAGRARVPVVAMTGGDEAQDGPACLAAGMDGFLAKPFTVEAL 130          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: UPI001FEABFDA (ATP-binding protein n=1 Tax=Kineosporia corallincola TaxID=2835133 RepID=UPI001FEABFDA)

HSP 1 Score: 51.2 bits (121), Expect = 3.190e-5
Identity = 35/105 (33.33%), Postives = 50/105 (47.62%), Query Frame = 0
Query:    5 ICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG------PILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 103
            I + ML++ G  VS  + GE AV  +L     +   A F+D H+  G  G +  + +R+A  E       PI+  T      D  ACLDAG D  + KP+  D L
Sbjct:  569 IARAMLTSRGLDVSIVEDGEAAVGAVLGGQPGDRFDAVFMDVHM-PGTDGLEATRRIRAAEAEHGRGERIPIIAMTANAFDDDRTACLDAGMDDFLPKPWKADQL 672          
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A2I8A3Z4_9NOSO (DNA-binding response regulator n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A2I8A3Z4_9NOSO)

HSP 1 Score: 50.1 bits (118), Expect = 5.550e-5
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 0
Query:   31 LRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKD 101
            L+C  D  PA   VD  L AG +G  + ++LR+A    P+L+     T  D  ACL+AGAD  + KP+  +
Sbjct:   43 LQCYRDRQPALVVVDRML-AGESGLALCKNLRNAGMRSPVLVLMARDTVDDRVACLEAGADDYILKPYRSE 112          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A3Q9NJG8_9GAMM4.200e-736.36Histidine kinase n=2 Tax=Marinobacter sp. NP-4(201... [more]
A0A0P7DQK7_9GAMM4.970e-630.19Histidine kinase n=15 Tax=Bacteria TaxID=2 RepID=A... [more]
A0A4U1LSG2_COBMA9.260e-629.52Histidine kinase n=7 Tax=Cobetia TaxID=204286 RepI... [more]
UPI001581ABA69.540e-630.56response regulator n=1 Tax=Halomonas taeanensis Ta... [more]
A0A3T0K463_9GAMM1.720e-529.52Histidine kinase n=1 Tax=Cobetia sp. ICG0124 TaxID... [more]
A0A643F3S2_IDEDE2.260e-532.69Response regulator n=2 Tax=Ideonella dechloratans ... [more]
UPI001FEABFDA3.190e-533.33ATP-binding protein n=1 Tax=Kineosporia corallinco... [more]
A0A2I8A3Z4_9NOSO5.550e-538.03DNA-binding response regulator n=3 Tax=Nostocaceae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..103
e-value: 3.0E-16
score: 61.4
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 3..103
e-value: 1.4E-11
score: 44.6
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1..103
score: 24.486
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 3..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105810contigM-pyrifera_M_contig105810:83..391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105810.1245.1mRNA_M-pyrifera_M_contig105810.1245.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105810 56..391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105810.1245.1 ID=prot_M-pyrifera_M_contig105810.1245.1|Name=mRNA_M-pyrifera_M_contig105810.1245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
MSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGA
GMTGADVAQHLRSARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNK
DHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001789Sig_transdc_resp-reg_receiver
IPR011006CheY-like_superfamily