mRNA_M-pyrifera_M_contig105810.1245.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A3Q9NJG8_9GAMM (Histidine kinase n=2 Tax=Marinobacter sp. NP-4(2019) TaxID=2488665 RepID=A0A3Q9NJG8_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 2.130e-9 Identity = 40/112 (35.71%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 1 KVLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 KVL +D + + + +RML LG V G+EAV R +L E +D H+ G+ G + + LR F PI+ T G Q ++ A +AG DG ++KP +KDHL Sbjct: 962 KVLVAEDSDDNRRLVERMLRRLGLEVITVTCGDEAV----RVALSESVRLVLMDRHM-PGLDGVEATRMLRKTGFRRPIIAFTAG-DQQEIEALQNAGCDGALNKPIDKDHL 1067
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A4U1LSG2_COBMA (Histidine kinase n=7 Tax=Cobetia TaxID=204286 RepID=A0A4U1LSG2_COBMA) HSP 1 Score: 63.2 bits (152), Expect = 2.840e-9 Identity = 36/117 (30.77%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 1 KVLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG-----PILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 +VL V+D E++ S+ + ML LG V+ + GE+A+ ++ + D F+D + + G + + R E PI+ T + Q D C++AG DG++HKPF +D L Sbjct: 487 RVLVVEDNEVNQSLARAMLEYLGQQVTIVEEGEQALAWLSQA--DHEVDLIFMDMQMPV-LDGLETTRRWRQREAEASATRLPIIAMTANVMQEDARRCIEAGMDGVLHKPFTRDDL 600
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A0P7DQK7_9GAMM (Histidine kinase n=15 Tax=Bacteria TaxID=2 RepID=A0A0P7DQK7_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 2.840e-9 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 4 VLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGP------ILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 VL V+D E++ S+ + ML LG V+ + GE+A+E++ + S D F+D + + G + + R E P I+ T + Q D C++AG G++HKPF +D L Sbjct: 488 VLVVEDNEVNQSLARAMLEYLGQQVTVVEDGEQALEWLAQASNDV--DLVFMDMQMPV-LDGVETTRRWRQHESEQPASARLPIIAMTANVMQEDARRCIEAGMQGVLHKPFTRDDL 601
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A3T0K463_9GAMM (Histidine kinase n=1 Tax=Cobetia sp. ICG0124 TaxID=2053669 RepID=A0A3T0K463_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 5.260e-9 Identity = 36/117 (30.77%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 1 KVLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG-----PILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 +VL V+D E++ S+ + ML LG V+ + GE+A+ ++ + D F+D + + G + + R E PI+ T + Q D C++AG DG++HKPF +D L Sbjct: 487 RVLVVEDNEVNQSLARAMLEYLGQQVTIVEEGEQALAWLSQA--DHEVDLIFMDMQMPV-LDGLETTRRWRQREAETSATRLPIIAMTANVMQEDARRCIEAGMDGVLHKPFTRDDL 600
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: X0S1S5_9ZZZZ (Response regulatory domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0S1S5_9ZZZZ) HSP 1 Score: 58.2 bits (139), Expect = 1.790e-8 Identity = 34/112 (30.36%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 1 KVLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG--PILICTGGLTQADLAACLDAGADGIVHKPFNKD 330 K+L V+D E+++ +C R++ + G V + ++GEE VE ++ E P +D L G+ G + + LR + +G PI+ T D L AG G + KP N + Sbjct: 3 KILVVEDNEINIYLCSRIIKSSGYEVIEARSGEEGVELTIK----EKPDLIIMDIQL-PGIDGYEATKRLRKSEADGEIPIIALTSYAMAEDKKKALKAGCTGYIKKPINPE 109
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A1F9NAZ8_9DELT (Histidine kinase n=1 Tax=Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9 TaxID=1797899 RepID=A0A1F9NAZ8_9DELT) HSP 1 Score: 60.8 bits (146), Expect = 1.800e-8 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 4 VLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 VL +DDEEM L + KR+L TLG +V+ GE+AV L E +D + ++G +V + LR+A + +++C+G + + LD GA + KPF +D L Sbjct: 521 VLLIDDEEMVLEVGKRLLETLGHTVTCCSDGEKAVA--LFAKKPESFDVVILDLVM-PHLSGREVFERLRAAYPKVRVIVCSGYSVEGEAQKVLDLGARQFLQKPFRRDQL 628
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A1F9LHM0_9DELT (Histidine kinase n=1 Tax=Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 TaxID=1797895 RepID=A0A1F9LHM0_9DELT) HSP 1 Score: 60.8 bits (146), Expect = 1.850e-8 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 4 VLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 VL +DDEEM L + KR+L TLG +V+ GE+AV L E +D + ++G +V + LR+A + +++C+G + + LD GA + KPF +D L Sbjct: 752 VLLIDDEEMVLEVGKRLLETLGHTVTCCSDGEKAVA--LFAKKPESFDVVILDLVM-PHLSGREVFERLRAAYPKVRVIVCSGYSVEGEAQKVLDLGARQFLQKPFRRDQL 859
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: A0A2N3AJK8_9BACT (Response regulator n=1 Tax=Candidatus Atribacteria bacterium HGW-Atribacteria-1 TaxID=2013676 RepID=A0A2N3AJK8_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 7.050e-8 Identity = 33/112 (29.46%), Postives = 56/112 (50.00%), Query Frame = 1 Query: 1 KVLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG--PILICTGGLTQADLAACLDAGADGIVHKPFNKD 330 K+L V+D E+++ +C R+L + G V + ++GEE VE ++ P +D L G+ G + + +R + +G PI+ T D L AG G + KP N + Sbjct: 3 KILVVEDNEINMYLCSRILKSSGYEVIEARSGEEGVELTIKGK----PDLIIMDIQL-PGIDGLEATRRIRESEADGEIPIIALTSYAMAGDRKKALKAGCTGYIEKPINPE 109
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: UPI001FEABFDA (ATP-binding protein n=1 Tax=Kineosporia corallincola TaxID=2835133 RepID=UPI001FEABFDA) HSP 1 Score: 58.5 bits (140), Expect = 1.170e-7 Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 1 KVLAVDDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLRSARFEG------PILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 +VL +D E + I + ML++ G VS + GE AV +L + A F+D H+ G G + + +R+A E PI+ T D ACLDAG D + KP+ D L Sbjct: 556 RVLVAEDNETNQLIARAMLTSRGLDVSIVEDGEAAVGAVLGGQPGDRFDAVFMDVHM-PGTDGLEATRRIRAAEAEHGRGERIPIIAMTANAFDDDRTACLDAGMDDFLPKPWKADQL 672
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Match: UPI001581ABA6 (response regulator n=1 Tax=Halomonas taeanensis TaxID=284577 RepID=UPI001581ABA6) HSP 1 Score: 55.8 bits (133), Expect = 1.510e-7 Identity = 35/115 (30.43%), Postives = 58/115 (50.43%), Query Frame = 1 Query: 16 DDEEMSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAGMTGADVAQHLR--------SARFEGPILICTGGLTQADLAACLDAGADGIVHKPFNKDHL 336 +D E++ S+ + ML LG V+ + G +A+E++ + D F+D + + G + + R SAR PI+ T + Q D C+DAG G++HKPF +D L Sbjct: 1 EDNEVNQSLARAMLEYLGQQVTVVEDGGQALEWLAQAGNDV--DLVFMDMQMPV-LDGVETTRRWRHHEAEQPASARL--PIIAMTANVMQEDARRCIDAGMQGVLHKPFTRDDL 110 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105810.1245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105810.1245.1 >prot_M-pyrifera_M_contig105810.1245.1 ID=prot_M-pyrifera_M_contig105810.1245.1|Name=mRNA_M-pyrifera_M_contig105810.1245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp MSLSICKRMLSTLGGSVSDWKTGEEAVEYILRCSLDEMPAAAFVDFHLGAback to top mRNA from alignment at M-pyrifera_M_contig105810:56..391+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105810.1245.1 ID=mRNA_M-pyrifera_M_contig105810.1245.1|Name=mRNA_M-pyrifera_M_contig105810.1245.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig105810:56..391+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105810:56..391+ >mRNA_M-pyrifera_M_contig105810.1245.1 ID=mRNA_M-pyrifera_M_contig105810.1245.1|Name=mRNA_M-pyrifera_M_contig105810.1245.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig105810:56..391+ (Macrocystis pyrifera P11B4 male)back to top |