prot_M-pyrifera_M_contig105685.1221.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105685.1221.1
Unique Nameprot_M-pyrifera_M_contig105685.1221.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
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BLAST of mRNA_M-pyrifera_M_contig105685.1221.1 vs. uniprot
Match: A0A533TNG2_CHLSQ (Sel1 repeat family protein n=1 Tax=Chlorobium sp. TaxID=1095 RepID=A0A533TNG2_CHLSQ)

HSP 1 Score: 52.0 bits (123), Expect = 9.790e-6
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0 
Query:    5 AANGDADAQSAVGSFYSN----TEREAIAIKWFRLAADQGNAESQFKLAMAYDQGRG 57
            A +G+A AQ+ +G  Y      T+ EA A+KW+RLAA+QG AE+QF LA  Y++GRG
Sbjct:   34 AEHGNAVAQNKLGIHYELGLGITQDEAAAVKWYRLAAEQGLAEAQFNLAEMYEEGRG 90
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105685.1221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A533TNG2_CHLSQ9.790e-650.88Sel1 repeat family protein n=1 Tax=Chlorobium sp. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 10..41
e-value: 1.6
score: 17.8
coord: 78..113
e-value: 4.2E-5
score: 32.9
coord: 42..77
e-value: 6.5E-7
score: 39.0
coord: 114..146
e-value: 0.25
score: 20.4
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 26..41
e-value: 0.016
score: 15.9
coord: 88..113
e-value: 0.0011
score: 19.5
coord: 116..145
e-value: 0.0085
score: 16.8
coord: 42..77
e-value: 6.3E-9
score: 36.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..146
e-value: 1.4E-39
score: 138.7
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 4..145
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 8..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105685contigM-pyrifera_M_contig105685:61..498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105685.1221.1mRNA_M-pyrifera_M_contig105685.1221.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105685 61..498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105685.1221.1 ID=prot_M-pyrifera_M_contig105685.1221.1|Name=mRNA_M-pyrifera_M_contig105685.1221.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
KVSAAANGDADAQSAVGSFYSNTEREAIAIKWFRLAADQGNAESQFKLAM
AYDQGRGISANKIEAIRLYQLAVAQGYSDAQLMFASKYAQGMDVEQDFAQ
AAKLYQLAADQGDVFAINELGKMYVTGRGVAKSTDQAIQLYKVAAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf