prot_M-pyrifera_M_contig105658.1210.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105658.1210.1
Unique Nameprot_M-pyrifera_M_contig105658.1210.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length148
Homology
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BLAST of mRNA_M-pyrifera_M_contig105658.1210.1 vs. uniprot
Match: A0A8J4Q2C5_9MYCE (HMA domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2C5_9MYCE)

HSP 1 Score: 60.8 bits (146), Expect = 3.750e-8
Identity = 28/65 (43.08%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:   18 KTITLYISGMTNDNHRKQLETALLRVRGVVSFLIDLYAQKAVIRTLVSAETLVRAIRDTTGMTAS 82
            KT   ++ GM N++ +KQ+E ALL+ +GV+SF+IDL+  +A IRT +S++ +   IR+  G++AS
Sbjct:  162 KTFLFHVKGMNNESIKKQVEDALLKTKGVISFMIDLHTYQATIRTSLSSDEVKLVIRNNVGLSAS 226
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105658.1210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J4Q2C5_9MYCE3.750e-843.08HMA domain-containing protein n=1 Tax=Polysphondyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 5..88
e-value: 8.7E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR46840FAMILY NOT NAMEDcoord: 15..147
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 19..75
score: 10.05
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 14..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105658contigM-pyrifera_M_contig105658:19..462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105658.1210.1mRNA_M-pyrifera_M_contig105658.1210.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105658 19..462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105658.1210.1 ID=prot_M-pyrifera_M_contig105658.1210.1|Name=mRNA_M-pyrifera_M_contig105658.1210.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp
NTPSEGAKKPNRKMANAKTITLYISGMTNDNHRKQLETALLRVRGVVSFL
IDLYAQKAVIRTLVSAETLVRAIRDTTGMTASQRKHSPDASGTPEPDKEN
DAPGYLDDSTDDLQEHSKTALAKQDDKNDPQQAWGWGLGRISKALWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
IPR036163HMA_dom_sf