prot_M-pyrifera_M_contig105657.1209.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105657.1209.1
Unique Nameprot_M-pyrifera_M_contig105657.1209.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length151
Homology
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: RL13A_CYAPA (60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=RL13A_CYAPA)

HSP 1 Score: 229 bits (583), Expect = 3.720e-74
Identity = 104/151 (68.87%), Postives = 130/151 (86.09%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            MFEK V++DCRGHLLGRLA+ +AKELLNGQ VVAVRTEEINISG+L RNK+K+  FLKKR  TNP++GP HFR+P+R+LWRTIRGM+PHK  RG  ALERL+AFEG+PPP+D  +R+V+P ALRV R++PGR+FC LG L ++VGW+H +L
Sbjct:    1 MFEKVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDL 151          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A2D4C9L3_PYTIN (Ribosomal protein L13 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C9L3_PYTIN)

HSP 1 Score: 227 bits (579), Expect = 1.610e-73
Identity = 106/151 (70.20%), Postives = 130/151 (86.09%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            +FEK V++DCRGHLLGRLAS+IAKELL GQHVVAVR E++ +SG+ +RNK+K+++FL KRT+TNPKKGPIH+RAPSR+LWRTIRGMLPHK  RG  AL+RL+ F+GIPPPFD  +R+VVPDALRV R++  RRF  LG L S+VGWKH EL
Sbjct:    2 VFEKPVVVDCRGHLLGRLASLIAKELLQGQHVVAVRCEQLEVSGSHVRNKVKFMQFLNKRTSTNPKKGPIHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKVFDGIPPPFDKMKRMVVPDALRVLRLKANRRFTVLGRLASEVGWKHGEL 152          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A024FUT3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FUT3_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.560e-71
Identity = 103/151 (68.21%), Postives = 129/151 (85.43%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            +FEK V++DCRGHLLGRLAS+IAKELL GQ VVAVR E + ISG+ +RNK+K+++FL KRTATNPKKGPIH+RAPSR+LWRTIRGMLPHK  RG  AL+RL+AF+G+P P+D ++R+V+PDALRV R++  RRF  LG L S+VGWKH +L
Sbjct:    2 VFEKPVVVDCRGHLLGRLASLIAKELLQGQQVVAVRCEALEISGSHVRNKVKFMQFLNKRTATNPKKGPIHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKAFDGVPSPYDKQKRMVIPDALRVIRLKANRRFTILGQLASEVGWKHGDL 152          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: K3WLT8_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLT8_GLOUD)

HSP 1 Score: 221 bits (562), Expect = 6.430e-71
Identity = 100/151 (66.23%), Postives = 129/151 (85.43%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            +FEK V++DCRGHLLGRLAS++AKELL GQHVVAVR E++ ISG+ +RNK+K+++FL KRTATNPKKGP+H+RAPSR+LWRTIRGMLPHK  RG  AL+RL+ F+GIP P+D ++R+V+PDALR  R++  RR+  +G L S+VGWKH EL
Sbjct:    2 VFEKPVVVDCRGHLLGRLASLVAKELLQGQHVVAVRCEQLEISGSHVRNKVKFMQFLNKRTATNPKKGPVHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKVFDGIPSPYDKQKRMVIPDALRALRLKANRRYTVVGKLASEVGWKHGEL 152          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A0G4HLK1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HLK1_9ALVE)

HSP 1 Score: 219 bits (558), Expect = 2.520e-70
Identity = 98/151 (64.90%), Postives = 129/151 (85.43%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            MFEK++IID RGHLLGRLAS++AKELLNGQ +V VR E+INISG+L RN++KY+ FL+K+T +NP+ GP H+RAPS+++WRTIRGM+PHK  RG+ AL RL+ FEG+P P+D K+R+VVP AL+V R++  R+FCRLGDL S+VGW HD+L
Sbjct:    1 MFEKEIIIDARGHLLGRLASVVAKELLNGQSIVLVRCEDINISGSLYRNRLKYMEFLRKKTNSNPRDGPFHYRAPSKIIWRTIRGMMPHKTARGQMALARLRCFEGVPAPYDMKKRMVVPQALKVLRLKLHRKFCRLGDLSSRVGWNHDDL 151          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A7S1ADD7_NOCSC (Hypothetical protein n=2 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADD7_NOCSC)

HSP 1 Score: 219 bits (557), Expect = 3.580e-70
Identity = 97/151 (64.24%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            MF K+V++DC+GHLLGRLAS++AKELLNGQ+VV VRTE++NISG+L RNK+KY  F +K   +NPK GP HFRAPS++LWRTIRGM+PHK  RG  AL+RL+++EG P P+D K+++V+P AL+V R+RP RRFCRLG+L S+ GWKH +L
Sbjct:    1 MFTKEVVVDCKGHLLGRLASVLAKELLNGQNVVCVRTEDVNISGSLYRNKLKYAEFKRKTNNSNPKHGPFHFRAPSKILWRTIRGMIPHKTARGAAALDRLKSYEGCPHPYDVKKKMVIPQALKVLRLRPERRFCRLGELSSEFGWKHGDL 151          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: I0YM08_COCSC (Ribosomal protein L13a component of cytosolic 80S ribosome and 60S large subunit n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YM08_COCSC)

HSP 1 Score: 218 bits (554), Expect = 5.880e-70
Identity = 98/145 (67.59%), Postives = 121/145 (83.45%), Query Frame = 0
Query:    4 KQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKH 148
            K V+ID RGH+LGRLASI+AK+ LNGQH+V  R EEIN+SG L+R KMKY RFL+KR  +NPKKGPIHFRAPSR+ WRT+RGM+PHK  RG  ALERL+ FEG+PPP+D  +R+VVPDAL+V R++ G +FC+LGDL + VGWKH
Sbjct:    3 KTVVIDARGHMLGRLASIVAKQALNGQHIVVTRAEEINVSGGLVRQKMKYERFLRKRMNSNPKKGPIHFRAPSRIFWRTVRGMVPHKTKRGAAALERLKTFEGVPPPYDKVKRMVVPDALKVLRLQHGHKFCKLGDLAASVGWKH 147          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A024UUL0_9STRA (Ribosomal protein L13 n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UUL0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 7.460e-70
Identity = 99/150 (66.00%), Postives = 127/150 (84.67%), Query Frame = 0
Query:    2 FEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            FEK V+IDCR HL+GRLAS++AKELL GQHVVAVR EE+NISG+L+RNK+K+L+FL K++ TNPKKGP+H+RAPSR+ WRT+RGMLPHK  RG  AL+RL+ F+G+P P+D  +R+VVPDALRV R++  RR+  LG L SQVGW+H +L
Sbjct:    3 FEKPVVIDCRAHLVGRLASLVAKELLLGQHVVAVRCEELNISGSLVRNKVKFLQFLNKKSCTNPKKGPLHYRAPSRMFWRTVRGMLPHKTARGAAALQRLKVFDGVPSPYDKVKRMVVPDALRVLRLKANRRYTNLGQLSSQVGWRHHDL 152          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: H3G8D4_PHYRM (Uncharacterized protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3G8D4_PHYRM)

HSP 1 Score: 218 bits (554), Expect = 1.060e-69
Identity = 102/151 (67.55%), Postives = 128/151 (84.77%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            +FEK +I+DCRGHL+GRLAS+IAKELL GQHVVAVR E++ ISG+ +RNK+K+ +FL KRTATNPKKGPIH+RAPSR+LWRTIRGMLPHK  RG  AL+RL+ F+GIP P+D ++R+VVP ALRV R++  RR+  LG L S+VGW+H EL
Sbjct:    2 VFEKPIIVDCRGHLVGRLASLIAKELLQGQHVVAVRCEQLEISGSHVRNKVKFFQFLNKRTATNPKKGPIHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKVFDGIPSPYDKQKRMVVPAALRVLRLKANRRYTVLGALASEVGWRHAEL 152          
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A812SBB2_SYMPI (Hypothetical protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812SBB2_SYMPI)

HSP 1 Score: 216 bits (549), Expect = 5.530e-69
Identity = 100/151 (66.23%), Postives = 123/151 (81.46%), Query Frame = 0
Query:    1 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 151
            M   Q+I+DCRGHLLGRLAS++AKELLNGQ VV VR+E+INISG+L RNK+KY  F +K   +NP++GP HFRAPS++LWRTIRGM+PHK  RG  AL+RL+ FEGIP P+D K+R+VVP  L+V R+RP RRFCRLGDL  +VGWKH  L
Sbjct:    1 MSAAQIIVDCRGHLLGRLASVLAKELLNGQKVVCVRSEDINISGSLYRNKLKYAAFKRKHMNSNPRQGPFHFRAPSKILWRTIRGMVPHKTARGAAALDRLKTFEGIPHPYDRKKRMVVPSCLKVLRLRPERRFCRLGDLSKEVGWKHGAL 151          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RL13A_CYAPA3.720e-7468.8760S ribosomal protein L13a n=1 Tax=Cyanophora para... [more]
A0A2D4C9L3_PYTIN1.610e-7370.20Ribosomal protein L13 n=2 Tax=Pythium TaxID=4797 R... [more]
A0A024FUT3_9STRA4.560e-7168.21Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
K3WLT8_GLOUD6.430e-7166.23Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A0G4HLK1_9ALVE2.520e-7064.90Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1ADD7_NOCSC3.580e-7064.24Hypothetical protein n=2 Tax=Noctiluca scintillans... [more]
I0YM08_COCSC5.880e-7067.59Ribosomal protein L13a component of cytosolic 80S ... [more]
A0A024UUL0_9STRA7.460e-7066.00Ribosomal protein L13 n=5 Tax=Aphanomyces TaxID=10... [more]
H3G8D4_PHYRM1.060e-6967.55Uncharacterized protein n=25 Tax=Peronosporaceae T... [more]
A0A812SBB2_SYMPI5.530e-6966.23Hypothetical protein n=4 Tax=Symbiodinium TaxID=29... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..148
e-value: 1.5E-64
score: 218.3
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 6..148
IPR005822Ribosomal protein L13PIRSFPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 1..150
e-value: 1.4E-42
score: 143.2
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 6..110
e-value: 1.5E-7
score: 31.7
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 5..150
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 5..138
score: 18.603
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 6..147
e-value: 1.6E-52
score: 175.6
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF3RIBOSOMAL PROTEIN L13Acoord: 5..150
IPR023563Ribosomal protein L13, conserved sitePROSITEPS00783RIBOSOMAL_L13coord: 83..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105657contigM-pyrifera_M_contig105657:70..632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105657.1209.1mRNA_M-pyrifera_M_contig105657.1209.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105657 44..632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105657.1209.1 ID=prot_M-pyrifera_M_contig105657.1209.1|Name=mRNA_M-pyrifera_M_contig105657.1209.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNK
MKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALER
LQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDE
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036899Ribosomal_L13_sf
IPR005822Ribosomal_L13
IPR005755Ribosomal_L13_euk/arc
IPR023563Ribosomal_L13_CS