mRNA_M-pyrifera_M_contig105657.1209.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105657.1209.1
Unique NamemRNA_M-pyrifera_M_contig105657.1209.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: RL13A_CYAPA (60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=RL13A_CYAPA)

HSP 1 Score: 228 bits (582), Expect = 7.270e-74
Identity = 104/151 (68.87%), Postives = 130/151 (86.09%), Query Frame = 3 
Query:   27 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            MFEK V++DCRGHLLGRLA+ +AKELLNGQ VVAVRTEEINISG+L RNK+K+  FLKKR  TNP++GP HFR+P+R+LWRTIRGM+PHK  RG  ALERL+AFEG+PPP+D  +R+V+P ALRV R++PGR+FC LG L ++VGW+H +L
Sbjct:    1 MFEKVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDL 151
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A2D4C9L3_PYTIN (Ribosomal protein L13 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C9L3_PYTIN)

HSP 1 Score: 227 bits (579), Expect = 2.220e-73
Identity = 106/152 (69.74%), Postives = 131/152 (86.18%), Query Frame = 3 
Query:   24 IMFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            ++FEK V++DCRGHLLGRLAS+IAKELL GQHVVAVR E++ +SG+ +RNK+K+++FL KRT+TNPKKGPIH+RAPSR+LWRTIRGMLPHK  RG  AL+RL+ F+GIPPPFD  +R+VVPDALRV R++  RRF  LG L S+VGWKH EL
Sbjct:    1 MVFEKPVVVDCRGHLLGRLASLIAKELLQGQHVVAVRCEQLEVSGSHVRNKVKFMQFLNKRTSTNPKKGPIHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKVFDGIPPPFDKMKRMVVPDALRVLRLKANRRFTVLGRLASEVGWKHGEL 152
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A024FUT3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FUT3_9STRA)

HSP 1 Score: 221 bits (564), Expect = 6.260e-71
Identity = 103/152 (67.76%), Postives = 130/152 (85.53%), Query Frame = 3 
Query:   24 IMFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            ++FEK V++DCRGHLLGRLAS+IAKELL GQ VVAVR E + ISG+ +RNK+K+++FL KRTATNPKKGPIH+RAPSR+LWRTIRGMLPHK  RG  AL+RL+AF+G+P P+D ++R+V+PDALRV R++  RRF  LG L S+VGWKH +L
Sbjct:    1 MVFEKPVVVDCRGHLLGRLASLIAKELLQGQQVVAVRCEALEISGSHVRNKVKFMQFLNKRTATNPKKGPIHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKAFDGVPSPYDKQKRMVIPDALRVIRLKANRRFTILGQLASEVGWKHGDL 152
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: K3WLT8_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLT8_GLOUD)

HSP 1 Score: 221 bits (562), Expect = 8.820e-71
Identity = 100/152 (65.79%), Postives = 130/152 (85.53%), Query Frame = 3 
Query:   24 IMFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            ++FEK V++DCRGHLLGRLAS++AKELL GQHVVAVR E++ ISG+ +RNK+K+++FL KRTATNPKKGP+H+RAPSR+LWRTIRGMLPHK  RG  AL+RL+ F+GIP P+D ++R+V+PDALR  R++  RR+  +G L S+VGWKH EL
Sbjct:    1 MVFEKPVVVDCRGHLLGRLASLVAKELLQGQHVVAVRCEQLEISGSHVRNKVKFMQFLNKRTATNPKKGPVHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKVFDGIPSPYDKQKRMVIPDALRALRLKANRRYTVVGKLASEVGWKHGEL 152
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A0G4HLK1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HLK1_9ALVE)

HSP 1 Score: 219 bits (557), Expect = 4.920e-70
Identity = 98/151 (64.90%), Postives = 129/151 (85.43%), Query Frame = 3 
Query:   27 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            MFEK++IID RGHLLGRLAS++AKELLNGQ +V VR E+INISG+L RN++KY+ FL+K+T +NP+ GP H+RAPS+++WRTIRGM+PHK  RG+ AL RL+ FEG+P P+D K+R+VVP AL+V R++  R+FCRLGDL S+VGW HD+L
Sbjct:    1 MFEKEIIIDARGHLLGRLASVVAKELLNGQSIVLVRCEDINISGSLYRNRLKYMEFLRKKTNSNPRDGPFHYRAPSKIIWRTIRGMMPHKTARGQMALARLRCFEGVPAPYDMKKRMVVPQALKVLRLKLHRKFCRLGDLSSRVGWNHDDL 151
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A7S1ADD7_NOCSC (Hypothetical protein n=2 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADD7_NOCSC)

HSP 1 Score: 218 bits (556), Expect = 6.980e-70
Identity = 97/151 (64.24%), Postives = 127/151 (84.11%), Query Frame = 3 
Query:   27 MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            MF K+V++DC+GHLLGRLAS++AKELLNGQ+VV VRTE++NISG+L RNK+KY  F +K   +NPK GP HFRAPS++LWRTIRGM+PHK  RG  AL+RL+++EG P P+D K+++V+P AL+V R+RP RRFCRLG+L S+ GWKH +L
Sbjct:    1 MFTKEVVVDCKGHLLGRLASVLAKELLNGQNVVCVRTEDVNISGSLYRNKLKYAEFKRKTNNSNPKHGPFHFRAPSKILWRTIRGMIPHKTARGAAALDRLKSYEGCPHPYDVKKKMVIPQALKVLRLRPERRFCRLGELSSEFGWKHGDL 151
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: I0YM08_COCSC (Ribosomal protein L13a component of cytosolic 80S ribosome and 60S large subunit n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YM08_COCSC)

HSP 1 Score: 217 bits (553), Expect = 1.140e-69
Identity = 98/145 (67.59%), Postives = 121/145 (83.45%), Query Frame = 3 
Query:   36 KQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKH 470
            K V+ID RGH+LGRLASI+AK+ LNGQH+V  R EEIN+SG L+R KMKY RFL+KR  +NPKKGPIHFRAPSR+ WRT+RGM+PHK  RG  ALERL+ FEG+PPP+D  +R+VVPDAL+V R++ G +FC+LGDL + VGWKH
Sbjct:    3 KTVVIDARGHMLGRLASIVAKQALNGQHIVVTRAEEINVSGGLVRQKMKYERFLRKRMNSNPKKGPIHFRAPSRIFWRTVRGMVPHKTKRGAAALERLKTFEGVPPPYDKVKRMVVPDALKVLRLQHGHKFCKLGDLAASVGWKH 147
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A024UUL0_9STRA (Ribosomal protein L13 n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UUL0_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.450e-69
Identity = 99/150 (66.00%), Postives = 127/150 (84.67%), Query Frame = 3 
Query:   30 FEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            FEK V+IDCR HL+GRLAS++AKELL GQHVVAVR EE+NISG+L+RNK+K+L+FL K++ TNPKKGP+H+RAPSR+ WRT+RGMLPHK  RG  AL+RL+ F+G+P P+D  +R+VVPDALRV R++  RR+  LG L SQVGW+H +L
Sbjct:    3 FEKPVVIDCRAHLVGRLASLVAKELLLGQHVVAVRCEELNISGSLVRNKVKFLQFLNKKSCTNPKKGPLHYRAPSRMFWRTVRGMLPHKTARGAAALQRLKVFDGVPSPYDKVKRMVVPDALRVLRLKANRRYTNLGQLSSQVGWRHHDL 152
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: H3G8D4_PHYRM (Uncharacterized protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3G8D4_PHYRM)

HSP 1 Score: 218 bits (554), Expect = 1.450e-69
Identity = 102/152 (67.11%), Postives = 129/152 (84.87%), Query Frame = 3 
Query:   24 IMFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            ++FEK +I+DCRGHL+GRLAS+IAKELL GQHVVAVR E++ ISG+ +RNK+K+ +FL KRTATNPKKGPIH+RAPSR+LWRTIRGMLPHK  RG  AL+RL+ F+GIP P+D ++R+VVP ALRV R++  RR+  LG L S+VGW+H EL
Sbjct:    1 MVFEKPIIVDCRGHLVGRLASLIAKELLQGQHVVAVRCEQLEISGSHVRNKVKFFQFLNKRTATNPKKGPIHYRAPSRMLWRTIRGMLPHKTARGAAALQRLKVFDGIPSPYDKQKRMVVPAALRVLRLKANRRYTVLGALASEVGWRHAEL 152
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BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Match: A0A5A8DK30_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DK30_CAFRO)

HSP 1 Score: 216 bits (551), Expect = 6.320e-69
Identity = 104/154 (67.53%), Postives = 126/154 (81.82%), Query Frame = 3 
Query:   21 AIMFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNKMKYLRFLKKRTATNPKKG-PIHFRAPSRVLWRTIRGMLPHKMNRGKCALERLQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDEL 479
            AIMFEK V+IDCRGHLLGRLASI+AKELL GQ VV VRTEE+N+SG+L RN+ K+  FL K+  TNP++G P+HFR+PSR+LWRTIRGM+PHK  RG  A+ RL+  EGIPPPFD  +R+VVP ALRV ++RPGR FC+LGDL   VGWKH +L
Sbjct:   32 AIMFEKVVVIDCRGHLLGRLASIVAKELLCGQKVVCVRTEEVNVSGSLYRNQTKFHEFLNKKRNTNPRRGGPVHFRSPSRMLWRTIRGMIPHKTARGTAAMARLKTLEGIPPPFDKMKRMVVPKALRVLQLRPGRDFCKLGDLAHAVGWKHRDL 185
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105657.1209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RL13A_CYAPA7.270e-7468.8760S ribosomal protein L13a n=1 Tax=Cyanophora para... [more]
A0A2D4C9L3_PYTIN2.220e-7369.74Ribosomal protein L13 n=2 Tax=Pythium TaxID=4797 R... [more]
A0A024FUT3_9STRA6.260e-7167.76Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
K3WLT8_GLOUD8.820e-7165.79Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A0G4HLK1_9ALVE4.920e-7064.90Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1ADD7_NOCSC6.980e-7064.24Hypothetical protein n=2 Tax=Noctiluca scintillans... [more]
I0YM08_COCSC1.140e-6967.59Ribosomal protein L13a component of cytosolic 80S ... [more]
A0A024UUL0_9STRA1.450e-6966.00Ribosomal protein L13 n=5 Tax=Aphanomyces TaxID=10... [more]
H3G8D4_PHYRM1.450e-6967.11Uncharacterized protein n=25 Tax=Peronosporaceae T... [more]
A0A5A8DK30_CAFRO6.320e-6967.53Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105657contigM-pyrifera_M_contig105657:44..632 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.8
Seed ortholog evalue5.5e-56
Seed eggNOG ortholog65071.PYU1_T005930
Preferred nameRPL13A
KEGG rclassRC01978
KEGG koko:K02872,ko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,ko03010,map00785,map01100,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0002181,GO:0002237,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007423,GO:0008104,GO:0008150,GO:0008152,GO:0008407,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009719,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010212,GO:0010224,GO:0010243,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0014070,GO:0014074,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016477,GO:0017148,GO:0019222,GO:0019439,GO:0019538,GO:0022416,GO:0022625,GO:0022626,GO:0023052,GO:0030323,GO:0030324,GO:0030595,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0033993,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034613,GO:0034641,GO:0034644,GO:0034645,GO:0034655,GO:0035295,GO:0040011,GO:0042221,GO:0042330,GO:0042592,GO:0042886,GO:0043043,GO:0043170,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043603,GO:0043604,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045087,GO:0045184,GO:0045947,GO:0046483,GO:0046683,GO:0046700,GO:0046907,GO:0048246,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0048870,GO:0050789,GO:0050794,GO:0050896,GO:0050900,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051591,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060326,GO:0060425,GO:0060541,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0070972,GO:0071214,GO:0071310,GO:0071320,GO:0071345,GO:0071346,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071480,GO:0071482,GO:0071493,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0097452,GO:0097529,GO:0104004,GO:1901193,GO:1901194,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1904688,GO:1904689,GO:1905517,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766
EggNOG free text desc.60S ribosomal protein L13. Source PGD
EggNOG OGs1MCBA@121069,COG0102@1,KOG3204@2759
EC2.8.1.8
COG Functional cat.J
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Exons2
Model size479
Cds size453
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105657.1209.1prot_M-pyrifera_M_contig105657.1209.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105657 70..632 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815565.1138535-UTR-M-pyrifera_M_contig105657:43..691622815565.1138535-UTR-M-pyrifera_M_contig105657:43..69Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig105657 44..69 +
1692277466.150175-UTR-M-pyrifera_M_contig105657:43..691692277466.150175-UTR-M-pyrifera_M_contig105657:43..69Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig105657 44..69 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815565.1246946-CDS-M-pyrifera_M_contig105657:69..2051622815565.1246946-CDS-M-pyrifera_M_contig105657:69..205Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105657 70..205 +
1692277466.1629627-CDS-M-pyrifera_M_contig105657:69..2051692277466.1629627-CDS-M-pyrifera_M_contig105657:69..205Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105657 70..205 +
1622815565.136489-CDS-M-pyrifera_M_contig105657:315..6321622815565.136489-CDS-M-pyrifera_M_contig105657:315..632Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105657 316..632 +
1692277466.173061-CDS-M-pyrifera_M_contig105657:315..6321692277466.173061-CDS-M-pyrifera_M_contig105657:315..632Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105657 316..632 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105657.1209.1

>prot_M-pyrifera_M_contig105657.1209.1 ID=prot_M-pyrifera_M_contig105657.1209.1|Name=mRNA_M-pyrifera_M_contig105657.1209.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
MFEKQVIIDCRGHLLGRLASIIAKELLNGQHVVAVRTEEINISGTLIRNK
MKYLRFLKKRTATNPKKGPIHFRAPSRVLWRTIRGMLPHKMNRGKCALER
LQAFEGIPPPFDTKRRVVVPDALRVTRMRPGRRFCRLGDLCSQVGWKHDE
L
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mRNA from alignment at M-pyrifera_M_contig105657:44..632+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105657.1209.1 ID=mRNA_M-pyrifera_M_contig105657.1209.1|Name=mRNA_M-pyrifera_M_contig105657.1209.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=589bp|location=Sequence derived from alignment at M-pyrifera_M_contig105657:44..632+ (Macrocystis pyrifera P11B4 male)
GCCTCATCCCCTTTCACCGCGCCATCATGTTTGAGAAGCAGGTCATCATC
GACTGCCGCGGCCACCTCCTGGGTCGTCTGGCATCCATCATTGCCAAGGA
GCTGCTGAACGGCCAGCATGTGGTGGCTGTGCGCACCGAGGAGATCAACA
TCTCGGGCACCCGTGCGTGAGGCGCCGTCGCGTTCGCTCTTTGCTCGCAC
CGCGCCGCGCGCGTCTCCCCGTCTCTCCCACCTACCTGCATGTCTTCCGT
CCTCACCCTCTCGTGCGCGCAGTCATTCGCAACAAGATGAAGTACCTGCG
CTTCCTGAAGAAGCGCACTGCCACCAACCCGAAGAAGGGCCCCATCCACT
TCCGCGCCCCGTCGCGCGTGCTGTGGCGCACCATCCGTGGCATGCTCCCG
CACAAGATGAACCGCGGCAAGTGCGCGCTGGAGCGCCTGCAGGCGTTCGA
GGGCATCCCGCCGCCTTTCGACACCAAGCGCCGCGTTGTGGTGCCGGACG
CGCTCCGCGTCACGCGCATGCGCCCGGGCCGCCGTTTCTGTCGCTTGGGT
GACCTGTGCAGCCAGGTCGGCTGGAAGCACGACGAGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105657:44..632+

>mRNA_M-pyrifera_M_contig105657.1209.1 ID=mRNA_M-pyrifera_M_contig105657.1209.1|Name=mRNA_M-pyrifera_M_contig105657.1209.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig105657:44..632+ (Macrocystis pyrifera P11B4 male)
ATGTTTGAGAAGCAGGTCATCATCGACTGCCGCGGCCACCTCCTGGGTCG
TCTGGCATCCATCATTGCCAAGGAGCTGCTGAACGGCCAGCATGTGGTGG
CTGTGCGCACCGAGGAGATCAACATCTCGGGCACCCATGTTTGAGAAGCA
GGTCATCATCGACTGCCGCGGCCACCTCCTGGGTCGTCTGGCATCCATCA
TTGCCAAGGAGCTGCTGAACGGCCAGCATGTGGTGGCTGTGCGCACCGAG
GAGATCAACATCTCGGGCACCCTCATTCGCAACAAGATGAAGTACCTGCG
CTTCCTGAAGAAGCGCACTGCCACCAACCCGAAGAAGGGCCCCATCCACT
TCCGCGCCCCGTCGCGCGTGCTGTGGCGCACCATCCGTGGCATGCTCCCG
CACAAGATGAACCGCGGCAAGTGCGCGCTGGAGCGCCTGCAGGCGTTCGA
GGGCATCCCGCCGCCTTTCGACACCAAGCGCCGCGTTGTGGTGCCGGACG
CGCTCCGCGTCACGCGCATGCGCCCGGGCCGCCGTTTCTGTCGCTTGGGT
GACCTGTGCAGCCAGGTCGGCTGGAAGCACGACGAGCTGTCATTCGCAAC
AAGATGAAGTACCTGCGCTTCCTGAAGAAGCGCACTGCCACCAACCCGAA
GAAGGGCCCCATCCACTTCCGCGCCCCGTCGCGCGTGCTGTGGCGCACCA
TCCGTGGCATGCTCCCGCACAAGATGAACCGCGGCAAGTGCGCGCTGGAG
CGCCTGCAGGCGTTCGAGGGCATCCCGCCGCCTTTCGACACCAAGCGCCG
CGTTGTGGTGCCGGACGCGCTCCGCGTCACGCGCATGCGCCCGGGCCGCC
GTTTCTGTCGCTTGGGTGACCTGTGCAGCCAGGTCGGCTGGAAGCACGAC
GAGCTG
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