prot_M-pyrifera_M_contig104729.1015.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104729.1015.1
Unique Nameprot_M-pyrifera_M_contig104729.1015.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
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BLAST of mRNA_M-pyrifera_M_contig104729.1015.1 vs. uniprot
Match: A0A7X6P267_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P267_9ACTN)

HSP 1 Score: 48.1 bits (113), Expect = 9.470e-5
Identity = 25/74 (33.78%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:    1 MSHIVIHEDSNNGTHYAEFDDVQEAVAHLEQLVNEDSGANARLFALEPVEFAVKSYVKVEINSADTDPPAPVSA 74
            MSH+VI +  +    Y +F+ V+E+VA +E L NE +  +A++F L+ V+F  + Y +V++       P P  A
Sbjct:    1 MSHMVIFQTPDGDQGYNQFETVEESVAFVESLRNEQNVLSAKIFKLDEVKFEFRPYFRVQLAQLGAGDPPPAYA 74
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104729.1015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X6P267_9ACTN9.470e-533.78Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104729contigM-pyrifera_M_contig104729:255..500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104729.1015.1mRNA_M-pyrifera_M_contig104729.1015.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104729 255..500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104729.1015.1 ID=prot_M-pyrifera_M_contig104729.1015.1|Name=mRNA_M-pyrifera_M_contig104729.1015.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MSHIVIHEDSNNGTHYAEFDDVQEAVAHLEQLVNEDSGANARLFALEPVE
FAVKSYVKVEINSADTDPPAPVSAAIEAPPVE
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