prot_M-pyrifera_M_contig104072.870.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104072.870.1
Unique Nameprot_M-pyrifera_M_contig104072.870.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A0D2VHN5_GOSRA (Bromo domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2VHN5_GOSRA)

HSP 1 Score: 103 bits (258), Expect = 1.560e-24
Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKF 95
            + KHPA  +F  PVD +ALKI DY+ ++K PMDLGT+  KL    Y  + + VAD+RL +SNAMLYNPPSN VH +A++++++FE +  S   K+
Sbjct:   93 LMKHPAGWVFNQPVDPIALKIPDYFSIIKNPMDLGTIKSKLVKNAYLGIEEFVADIRLTFSNAMLYNPPSNNVHKMAQEMNEFFESRWKSLEEKW 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A103Y4T5_CYNCS (Bromodomain-containing protein n=4 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y4T5_CYNCS)

HSP 1 Score: 105 bits (261), Expect = 4.130e-24
Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFE 85
            +  H    +F  PVDVVALKI DY++V+K PMDLGT+ EKLGSG+Y    + +ADVRL +SNAM YNPP N+VH +A  LS +FE
Sbjct:  181 LMSHQHGWVFNKPVDVVALKIPDYFNVIKNPMDLGTIKEKLGSGKYSSPLEFLADVRLTFSNAMTYNPPGNHVHLMADVLSKFFE 265
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A0D2ULR0_GOSRA (Bromo domain-containing protein n=3 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2ULR0_GOSRA)

HSP 1 Score: 103 bits (258), Expect = 5.820e-24
Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKF 95
            + KHPA  +F  PVD +ALKI DY+ ++K PMDLGT+  KL    Y  + + VAD+RL +SNAMLYNPPSN VH +A++++++FE +  S   K+
Sbjct:   93 LMKHPAGWVFNQPVDPIALKIPDYFSIIKNPMDLGTIKSKLVKNAYLGIEEFVADIRLTFSNAMLYNPPSNNVHKMAQEMNEFFESRWKSLEEKW 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A2C9UFA8_MANES (Bromo domain-containing protein n=3 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UFA8_MANES)

HSP 1 Score: 104 bits (259), Expect = 6.260e-24
Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 0 
Query:    3 KHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKFVSQLAEDAED 105
            KHP    FR PVD VAL I DY+ ++  PMDLGT+  KL   +Y    + VADVRL++SNAMLYNPP+NYVH +A+ ++ +FE +  S   K+  +L++  ++
Sbjct:   86 KHPCGWAFREPVDPVALNIPDYFSIISNPMDLGTIKSKLEKNQYSGAEEFVADVRLIFSNAMLYNPPTNYVHQMAESMNKFFESRWKSLEAKWNRELSKSGDE 188
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A0D2UNE3_GOSRA (Bromo domain-containing protein n=66 Tax=Gossypium TaxID=3633 RepID=A0A0D2UNE3_GOSRA)

HSP 1 Score: 103 bits (258), Expect = 9.530e-24
Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKF 95
            + KHPA  +F  PVD +ALKI DY+ ++K PMDLGT+  KL    Y  + + VAD+RL +SNAMLYNPPSN VH +A++++++FE +  S   K+
Sbjct:   93 LMKHPAGWVFNQPVDPIALKIPDYFSIIKNPMDLGTIKSKLVKNAYLGIEEFVADIRLTFSNAMLYNPPSNNVHKMAQEMNEFFESRWKSLEEKW 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A0D2TKS3_GOSRA (Bromo domain-containing protein n=2 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2TKS3_GOSRA)

HSP 1 Score: 101 bits (252), Expect = 3.270e-23
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSS 90
            + KHPA  +F  PVD  AL+I DY+ ++K PMDLGT+  KLG   Y    + VAD+RL +SNAMLYNPPSN VH +A+++ ++FE +  S
Sbjct:   89 LMKHPAGWVFNQPVDPKALQIPDYFSIIKNPMDLGTIKSKLGKNIYLGTDEFVADIRLTFSNAMLYNPPSNNVHKMAEEMKEFFEARWKS 178
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: UPI001CB98039 (transcription factor GTE9-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB98039)

HSP 1 Score: 102 bits (254), Expect = 3.650e-23
Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 0 
Query:    4 HPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFE 85
            HP   +F  PVDVV LKI DY+DV+K PMD GT+ EKL SG+Y    + +ADVRL +SNAM YNPP N VH +A  LS +FE
Sbjct:  185 HPHGWVFNNPVDVVTLKIPDYFDVIKNPMDFGTIKEKLSSGKYSSPLEFLADVRLTFSNAMTYNPPGNDVHVMADVLSKFFE 266
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A6P5WHS8_DURZI (transcription factor GTE12-like isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5WHS8_DURZI)

HSP 1 Score: 102 bits (253), Expect = 4.630e-23
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKF 95
            + KHPA  +F  PVD  ALKI DY+ ++K PMDLGT+  KL    Y  + + VAD++L +SNAMLYNPPSN VH +A++++++FE +  S   K+
Sbjct:  105 LMKHPAGWVFNQPVDPKALKIPDYFSIIKNPMDLGTIKSKLAKNTYLGIEEFVADIKLTFSNAMLYNPPSNNVHKMAEEMNEFFEARWKSLEEKW 199
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A0D2UMW8_GOSRA (Bromo domain-containing protein n=25 Tax=Gossypium TaxID=3633 RepID=A0A0D2UMW8_GOSRA)

HSP 1 Score: 101 bits (252), Expect = 5.130e-23
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSS 90
            + KHPA  +F  PVD  AL+I DY+ ++K PMDLGT+  KLG   Y    + VAD+RL +SNAMLYNPPSN VH +A+++ ++FE +  S
Sbjct:   89 LMKHPAGWVFNQPVDPKALQIPDYFSIIKNPMDLGTIKSKLGKNIYLGTDEFVADIRLTFSNAMLYNPPSNNVHKMAEEMKEFFEARWKS 178
[Close]
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Match: A0A6A6LVC7_HEVBR (Bromo domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LVC7_HEVBR)

HSP 1 Score: 101 bits (252), Expect = 6.050e-23
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0 
Query:    4 HPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVGDVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKFVSQLAE 101
            +P+  IFR PVD VALKI DY+ ++  PMDLGT+  KL   +Y    +  ADVRL +SNAMLYNPP+NYVH +A+ L+  FE +  S   K+  +++E
Sbjct:  103 NPSGWIFREPVDPVALKIPDYFSIISNPMDLGTIKSKLEKNQYSGTEEFAADVRLTFSNAMLYNPPTNYVHQVAESLNKIFETKWKSLQEKWNHEISE 200
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104072.870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2VHN5_GOSRA1.560e-2449.47Bromo domain-containing protein n=1 Tax=Gossypium ... [more]
A0A103Y4T5_CYNCS4.130e-2457.65Bromodomain-containing protein n=4 Tax=Cynara card... [more]
A0A0D2ULR0_GOSRA5.820e-2449.47Bromo domain-containing protein n=3 Tax=Gossypium ... [more]
A0A2C9UFA8_MANES6.260e-2446.60Bromo domain-containing protein n=3 Tax=Manihot es... [more]
A0A0D2UNE3_GOSRA9.530e-2449.47Bromo domain-containing protein n=66 Tax=Gossypium... [more]
A0A0D2TKS3_GOSRA3.270e-2351.11Bromo domain-containing protein n=2 Tax=Gossypium ... [more]
UPI001CB980393.650e-2358.54transcription factor GTE9-like n=1 Tax=Erigeron ca... [more]
A0A6P5WHS8_DURZI4.630e-2348.42transcription factor GTE12-like isoform X1 n=2 Tax... [more]
A0A0D2UMW8_GOSRA5.130e-2351.11Bromo domain-containing protein n=25 Tax=Gossypium... [more]
A0A6A6LVC7_HEVBR6.050e-2348.98Bromo domain-containing protein n=2 Tax=Hevea bras... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 37..55
score: 23.46
coord: 55..74
score: 40.0
coord: 21..37
score: 47.06
coord: 5..18
score: 32.61
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..93
e-value: 3.3E-18
score: 76.5
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..78
e-value: 1.6E-18
score: 66.5
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 2..74
score: 17.55
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..101
e-value: 1.1E-32
score: 114.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..95
NoneNo IPR availablePANTHERPTHR46136:SF13TRANSCRIPTION FACTOR GTE10coord: 2..96
NoneNo IPR availablePANTHERPTHR46136FAMILY NOT NAMEDcoord: 2..96
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 7..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104072contigM-pyrifera_M_contig104072:233..547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104072.870.1mRNA_M-pyrifera_M_contig104072.870.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104072 212..547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104072.870.1 ID=prot_M-pyrifera_M_contig104072.870.1|Name=mRNA_M-pyrifera_M_contig104072.870.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MKKHPAAAIFRAPVDVVALKISDYYDVVKTPMDLGTVSEKLGSGRYGLVG
DVVADVRLVWSNAMLYNPPSNYVHTIAKKLSDYFERQLSSALPKFVSQLA
EDAED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf
IPR018359Bromodomain_CS