prot_M-pyrifera_M_contig103934.831.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103934.831.1
Unique Nameprot_M-pyrifera_M_contig103934.831.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length70
Homology
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: A0A811RGI2_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811RGI2_9POAL)

HSP 1 Score: 62.0 bits (149), Expect = 7.250e-10
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  141 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 206          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: UPI0019D62FFA (suppressor of mec-8 and unc-52 protein homolog 2-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D62FFA)

HSP 1 Score: 62.0 bits (149), Expect = 1.420e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  312 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 377          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: A0A3L6RAJ3_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RAJ3_PANMI)

HSP 1 Score: 62.0 bits (149), Expect = 1.430e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  329 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 394          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: A0A811SKB1_9POAL (Hypothetical protein (Fragment) n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811SKB1_9POAL)

HSP 1 Score: 62.0 bits (149), Expect = 1.430e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  344 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 409          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: J3NBC1_ORYBR (Uncharacterized protein n=42 Tax=Poaceae TaxID=4479 RepID=J3NBC1_ORYBR)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  468 MDMGGRAKGRLHRWDFETEEEWAKYNDEKEAMPKAAFQFGVKMQDGRKTRKQNKDQKITNDLHKIN 533          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: A0A1B6PPW9_SORBI (Uncharacterized protein n=12 Tax=Panicoideae TaxID=147369 RepID=A0A1B6PPW9_SORBI)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  469 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 534          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: A4L9Q6_MAIZE (Putative splicing factor n=6 Tax=Panicoideae TaxID=147369 RepID=A4L9Q6_MAIZE)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  469 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 534          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: A0A5J9UU86_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UU86_9POAL)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  470 MDMGGRAKGRLHRWDFETEEEWAKYNDEKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKIN 535          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: V4KNL4_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KNL4_EUTSA)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEWE+Y   +EA P+AAFQ+G+K  D RK +K  +    ++D HK++
Sbjct:  473 MDMGGKAKGGLHRWDFETEEEWEKYNEQKEAMPKAAFQFGVKMQDGRKTRKQNRDQKLNNDLHKIN 538          
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Match: I1INU8_BRADI (Uncharacterized protein n=19 Tax=Pooideae TaxID=147368 RepID=I1INU8_BRADI)

HSP 1 Score: 62.0 bits (149), Expect = 1.450e-9
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRKKLKKAAANSHDYHKVS 66
            MD G   K  L  WDF T+EEW +Y + +EA P+AAFQ+G+K  D RK +K  K    ++D HK++
Sbjct:  478 MDMGGRAKGRLHRWDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKIN 543          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103934.831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A811RGI2_9POAL7.250e-1045.45Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
UPI0019D62FFA1.420e-945.45suppressor of mec-8 and unc-52 protein homolog 2-l... [more]
A0A3L6RAJ3_PANMI1.430e-945.45Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]
A0A811SKB1_9POAL1.430e-945.45Hypothetical protein (Fragment) n=1 Tax=Miscanthus... [more]
J3NBC1_ORYBR1.450e-945.45Uncharacterized protein n=42 Tax=Poaceae TaxID=447... [more]
A0A1B6PPW9_SORBI1.450e-945.45Uncharacterized protein n=12 Tax=Panicoideae TaxID... [more]
A4L9Q6_MAIZE1.450e-945.45Putative splicing factor n=6 Tax=Panicoideae TaxID... [more]
A0A5J9UU86_9POAL1.450e-945.45Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
V4KNL4_EUTSA1.450e-945.45Uncharacterized protein n=1 Tax=Eutrema salsugineu... [more]
I1INU8_BRADI1.450e-945.45Uncharacterized protein n=19 Tax=Pooideae TaxID=14... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012492Protein RED, C-terminalPFAMPF07807RED_Ccoord: 1..55
e-value: 1.8E-17
score: 63.8
IPR039896Protein Red-likePANTHERPTHR12765RED PROTEIN IK FACTOR CYTOKINE IKcoord: 1..66
NoneNo IPR availablePANTHERPTHR12765:SF5PROTEIN REDcoord: 1..66
NoneNo IPR availablePRODOMPD311621coord: 1..41
e-value: 7.0E-7
score: 121.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103934contigM-pyrifera_M_contig103934:111..320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103934.831.1mRNA_M-pyrifera_M_contig103934.831.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103934 84..320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103934.831.1 ID=prot_M-pyrifera_M_contig103934.831.1|Name=mRNA_M-pyrifera_M_contig103934.831.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
MDTGATNKKELRPWDFNTQEEWERYMNTREATPEAAFQYGMKKGDRRKRK
KLKKAAANSHDYHKVSGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012492RED_C
IPR039896Red-like