prot_M-pyrifera_M_contig10390.830.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10390.830.1
Unique Nameprot_M-pyrifera_M_contig10390.830.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length93
Homology
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BLAST of mRNA_M-pyrifera_M_contig10390.830.1 vs. uniprot
Match: A0A6H5JC42_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC42_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 2.740e-35
Identity = 67/85 (78.82%), Postives = 70/85 (82.35%), Query Frame = 0 
Query:    7 RRGRQRIPRGTLEARLQLHHPGIELGRLRLLLVDRDFTGEGEFDSALTLLRVHYQALLDLDENNDVPSTVGASEGEIRRNPSFLV 91
            RR RQRIPRG LEARLQLHHPGIELGRLRLLLVDRDFTGE             YQALLDLDENNDVPSTVGASEGEI+RNPSF++
Sbjct:  103 RRRRQRIPRGALEARLQLHHPGIELGRLRLLLVDRDFTGED------------YQALLDLDENNDVPSTVGASEGEIKRNPSFVI 175
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10390.830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JC42_9PHAE2.740e-3578.82RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10390contigM-pyrifera_M_contig10390:156..3964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10390.830.1mRNA_M-pyrifera_M_contig10390.830.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10390 156..3970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10390.830.1 ID=prot_M-pyrifera_M_contig10390.830.1|Name=mRNA_M-pyrifera_M_contig10390.830.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp
MANNARRRGRQRIPRGTLEARLQLHHPGIELGRLRLLLVDRDFTGEGEFD
SALTLLRVHYQALLDLDENNDVPSTVGASEGEIRRNPSFLVR*
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