prot_M-pyrifera_M_contig103875.827.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103875.827.1
Unique Nameprot_M-pyrifera_M_contig103875.827.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length36
Homology
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: UPI001C98B67C (flagellar FlbD family protein n=1 Tax=Modestobacter marinus TaxID=477641 RepID=UPI001C98B67C)

HSP 1 Score: 56.2 bits (134), Expect = 2.710e-9
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI+LTRLN EHF LNADLI+R+E  PDTVLTL+D
Sbjct:    1 MIRLTRLNGEHFVLNADLIQRVEGHPDTVLTLVD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A286H063_9ACTN (Flagellar protein FlbD n=1 Tax=Blastococcus sp. DSM 44270 TaxID=1938745 RepID=A0A286H063_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 1.070e-8
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI++TRLN EHFALNADLIER+EA PDTV  L+D
Sbjct:    1 MIRVTRLNGEHFALNADLIERVEAHPDTVAFLVD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A8F4W6C4_9ACTN (Flagellar FlbD family protein n=1 Tax=Modestobacter sp. L9-4 TaxID=2851567 RepID=A0A8F4W6C4_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 3.190e-8
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI+LTRLN EHF LNA+LI+R+E  PDTV+TL+D
Sbjct:    1 MIRLTRLNGEHFVLNAELIQRVEGHPDTVITLLD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A239EYB7_9ACTN (Flagellar protein FlbD n=1 Tax=Geodermatophilus saharensis TaxID=1137994 RepID=A0A239EYB7_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 3.190e-8
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI++TRLN EHFALN DLIER+E  PDTV++L+D
Sbjct:    1 MIRVTRLNGEHFALNPDLIERVEGHPDTVISLVD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A2T0TUS4_9ACTN (Flagellar protein FlbD n=1 Tax=Geodermatophilus tzadiensis TaxID=1137988 RepID=A0A2T0TUS4_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 4.320e-8
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI++TRLN EHFALN DLIER+E  PDTVL L+D
Sbjct:    1 MIRVTRLNGEHFALNPDLIERVEGHPDTVLFLVD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: UPI00110D0766 (flagellar FlbD family protein n=2 Tax=Modestobacter TaxID=88138 RepID=UPI00110D0766)

HSP 1 Score: 53.1 bits (126), Expect = 4.420e-8
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI+LTRLN EHF LNA+L++R+E  PDTV+TL+D
Sbjct:    1 MIRLTRLNGEHFVLNAELVQRVEGHPDTVITLLD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A354XPG8_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A354XPG8_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 5.210e-8
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    2 SMIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            ++I+LTRLN E FALN+DLIERIE  PDTVLTL+D
Sbjct:   32 TVIKLTRLNGEKFALNSDLIERIEESPDTVLTLVD 66          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A317QE95_9ACTN (Flagellar protein FlbD n=2 Tax=Geodermatophilus TaxID=1860 RepID=A0A317QE95_9ACTN)

HSP 1 Score: 52.0 bits (123), Expect = 1.310e-7
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI++TRLN EHFALN DLIER+E  PDTV+ L+D
Sbjct:    1 MIRVTRLNGEHFALNPDLIERVEGHPDTVVFLVD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A1I7A1J4_9ACTN (Flagellar protein FlbD n=3 Tax=Geodermatophilus TaxID=1860 RepID=A0A1I7A1J4_9ACTN)

HSP 1 Score: 52.0 bits (123), Expect = 1.370e-7
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI++TRLN EHFALN DLIER+E  PDTV+ L+D
Sbjct:    1 MIRVTRLNGEHFALNPDLIERVEGHPDTVVFLVD 34          
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Match: A0A1M5EAT0_9ACTN (Flagellar protein FlbD n=5 Tax=Geodermatophilus TaxID=1860 RepID=A0A1M5EAT0_9ACTN)

HSP 1 Score: 52.0 bits (123), Expect = 1.460e-7
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    3 MIQLTRLNNEHFALNADLIERIEAMPDTVLTLID 36
            MI++TRLN EHFALN DLIER+E  PDTV+ L+D
Sbjct:    1 MIRVTRLNGEHFALNPDLIERVEGHPDTVVFLVD 34          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103875.827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C98B67C2.710e-976.47flagellar FlbD family protein n=1 Tax=Modestobacte... [more]
A0A286H063_9ACTN1.070e-876.47Flagellar protein FlbD n=1 Tax=Blastococcus sp. DS... [more]
A0A8F4W6C4_9ACTN3.190e-870.59Flagellar FlbD family protein n=1 Tax=Modestobacte... [more]
A0A239EYB7_9ACTN3.190e-870.59Flagellar protein FlbD n=1 Tax=Geodermatophilus sa... [more]
A0A2T0TUS4_9ACTN4.320e-873.53Flagellar protein FlbD n=1 Tax=Geodermatophilus tz... [more]
UPI00110D07664.420e-867.65flagellar FlbD family protein n=2 Tax=Modestobacte... [more]
A0A354XPG8_9ACTN5.210e-874.29Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A317QE95_9ACTN1.310e-770.59Flagellar protein FlbD n=2 Tax=Geodermatophilus Ta... [more]
A0A1I7A1J4_9ACTN1.370e-770.59Flagellar protein FlbD n=3 Tax=Geodermatophilus Ta... [more]
A0A1M5EAT0_9ACTN1.460e-770.59Flagellar protein FlbD n=5 Tax=Geodermatophilus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009384Swarming motility protein SwrD-likePFAMPF06289FlbDcoord: 3..36
e-value: 3.9E-16
score: 58.4
IPR009384Swarming motility protein SwrD-likePANTHERPTHR39185FAMILY NOT NAMEDcoord: 3..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103875contigM-pyrifera_M_contig103875:542..649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103875.827.1mRNA_M-pyrifera_M_contig103875.827.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103875 536..649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103875.827.1 ID=prot_M-pyrifera_M_contig103875.827.1|Name=mRNA_M-pyrifera_M_contig103875.827.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=36bp
MSMIQLTRLNNEHFALNADLIERIEAMPDTVLTLID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009384SwrD-like