prot_M-pyrifera_M_contig103870.824.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103870.824.1
Unique Nameprot_M-pyrifera_M_contig103870.824.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A2E5X2Y1_9BACT (Sigma-54 factor interaction domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X2Y1_9BACT)

HSP 1 Score: 93.6 bits (231), Expect = 2.120e-19
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 0
Query:    1 GERRVDVPAVSTRRAELPGSFEVVLRRAARRQGCLAPT-LAECARPVVWRQPWARGLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLEALDL 144
            G  +  VP +S RRAE+P   E +  R AR + CLAP  L++ A  V+WRQ W   L  L     +L  L  G  +  RE++ +S    + +  +L +R    +D+IQAL  TR + G +++ RAA  +GWDPDTL A+L  L++
Sbjct:  735 GRLQFIVPPLSGRRAEIPALVEFLAARVAREE-CLAPVELSDQALAVLWRQSWTGNLRQLESAVYKLVLLHHGQSVGKREILEMSQRFALGIQQRLSSRQPKYEDVIQALDHTRTRGGRINKTRAALYLGWDPDTLVARLGDLEI 878          
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A2D6HJH3_9BACT (Sigma-54 factor interaction domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJH3_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 3.120e-15
Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 0
Query:    7 VPAVSTRRAELPGSFEVVLRRAARRQGCLAPTLAECARPVVWRQPWARGLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKL 139
            VP +  RR E+PG    + RR A  +        E A  ++WRQ W   L +L  L  +L   A G  +  R +   +A  G  L  KLP+R     DL+ AL  T    G  ++ RAAA +GWDPDTL A++
Sbjct:  741 VPPLRLRREEIPGIVSFLSRRFAADEHASVAEFDESAMGLLWRQAWEGNLRELESLIFKLVLAADGEVVCARTVRATAARAGQTLQGKLPSRHPARADLVAALRSTLTGGGRTNKSRAAAYLGWDPDTLCARM 873          
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A523PQY6_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PQY6_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 2.730e-14
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    7 VPAVSTRRAELPGSFEVVLRRAARRQGCLAPTLAECARPVVWRQPWARGLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLEALDLH 145
            VP +  RR ++P     + RR A  +    P L + A+ ++WRQ W   + +L +   +L     G  L    ++   A  GV L  +LP+R     DL+ AL  TR + G  ++ RAA  +GWDPDTL A+++  D H
Sbjct:  752 VPPLRDRRNDIPLLARFLARRIAAEEAVPVPLLTDDAQALLWRQAWPGNVRELENAVFKLVLHHAGEELDADAVVRALAPYGVLLARRLPSRHPPRADLVAALVTTRTRGGRPNKSRAAQYLGWDPDTLVARMK--DAH 888          
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A521K5Q6_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K5Q6_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 1.750e-13
Identity = 42/139 (30.22%), Postives = 72/139 (51.80%), Query Frame = 0
Query:    5 VDVPAVSTRRAELPGSFEVVLRRAARRQGCLAPTLAECARPVVWRQPWARGLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLEALD 143
            + VP+++ RR E+P      L R A  +    P L E    ++WRQ W   L +L     RL  L  G  +   EL   +A   ++L  ++  R  + + +  AL+ TRK++G+ ++ RAA+ +GW+ +TL A+L   +
Sbjct:  807 IAVPSLAQRRDEIPVLARHFLERLAAEERLDTPALGESCLALLWRQDWPGNLRELEQFLYRLALLCPGREIDAAELARAAARHRLDLSKRIAPRQAERELVAMALSCTRKQNGSFNKSRAASYLGWETETLVARLREFE 945          
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A800KK82_9BACT (Sigma-54 factor interaction domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A800KK82_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 6.190e-11
Identity = 45/140 (32.14%), Postives = 71/140 (50.71%), Query Frame = 0
Query:    5 VDVPAVSTRRAELPGSFEVVLRRAARRQGCLAPTLAECARPVVWRQPWARGLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLEALDL 144
            V V  ++ RR ELP     +LR      G     L + A  + WRQPW  G+  L     +L   + G  +       + +  G+  + +LP+R    +D++ AL  TR +SG +++ RAA  +GWDPDTL A+++ L L
Sbjct:  731 VRVGGLAERRVELPFLVPSLLRILREHHGGPLLRLDDAALGLFWRQPWEGGMAALKGALLKLLLESSGEVIEFDPAHSVLSANGLGPIKRLPSRRPCRRDVVSALDSTRLESGRINKTRAAQYLGWDPDTLVARMQDLGL 870          
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A518EX78_9BACT (C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EX78_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 7.420e-10
Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 0
Query:    1 GERRVDVPAVSTRRAELPGSFEVVLRRAARRQGCLAPTLAECARPVVWRQPWARGLHDLAHLARRLT-----PLAQ------------GAHLTG-RELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLE 140
            G   V   ++  RR  +P   E +LRR   R+G     + + A   +WRQPWA  +  L  +   L      P+A+            GA   G  E +    + G+E++ +LP+R     DL+ AL  TR  +  L++ RAA  +GWDP+TL A+L+
Sbjct:  812 GRVTVRCRSLRDRRHAIPVLAEFLLRRMVDREGGPRLEVDDAAMATLWRQPWAENIAGLEAVLSGLFLRFGHPVAESWGADPGCGEAGGAVAVGVEETLAAILDAGLEIVPRLPSRAPRESDLLAALWVTRTATQRLNKTRAAMYLGWDPNTLAARLK 969          
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Match: A0A518CWW6_9BACT (AAA domain-containing protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CWW6_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 4.230e-6
Identity = 36/112 (32.14%), Postives = 54/112 (48.21%), Query Frame = 0
Query:   37 PTLAECARPVVWRQPWAR----GLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDFDPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLEALDL 144
            P L + A   +WR  W+     GL DL  LA  L    +   +    L  ++A L + L ++L +R      L  A+  T   +G  ++ RAA  +GWD DT+RA+L   DL
Sbjct: 1110 PELDDSALAALWRGTWSASFGGGLADLDRLAHALVRERRRGRVGATALESVAARLSIALPSRLASRRPPAALLSDAVRTTAMTNGRTNQRRAALYLGWDRDTVRARLREADL 1221          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103870.824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2E5X2Y1_9BACT2.120e-1937.93Sigma-54 factor interaction domain-containing prot... [more]
A0A2D6HJH3_9BACT3.120e-1536.09Sigma-54 factor interaction domain-containing prot... [more]
A0A523PQY6_9BACT2.730e-1433.09Sigma-54-dependent Fis family transcriptional regu... [more]
A0A521K5Q6_9BACT1.750e-1330.22Sigma-54-dependent Fis family transcriptional regu... [more]
A0A800KK82_9BACT6.190e-1132.14Sigma-54 factor interaction domain-containing prot... [more]
A0A518EX78_9BACT7.420e-1031.01C4-dicarboxylate transport transcriptional regulat... [more]
A0A518CWW6_9BACT4.230e-632.14AAA domain-containing protein n=1 Tax=Planctomycet... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103870contigM-pyrifera_M_contig103870:2..439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103870.824.1mRNA_M-pyrifera_M_contig103870.824.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103870 2..439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103870.824.1 ID=prot_M-pyrifera_M_contig103870.824.1|Name=mRNA_M-pyrifera_M_contig103870.824.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
GERRVDVPAVSTRRAELPGSFEVVLRRAARRQGCLAPTLAECARPVVWRQ
PWARGLHDLAHLARRLTPLAQGAHLTGRELIGLSAELGVELLAKLPTRDF
DPQDLIQALAGTRKKSGALHRGRAAALMGWDPDTLRAKLEALDLH*
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