prot_M-pyrifera_M_contig103764.807.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103764.807.1
Unique Nameprot_M-pyrifera_M_contig103764.807.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length216
Homology
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A4R5LVS9_9GAMM (AraC family transcriptional regulator n=2 Tax=Seongchinamella unica TaxID=2547392 RepID=A0A4R5LVS9_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 1.050e-37
Identity = 77/219 (35.16%), Postives = 118/219 (53.88%), Query Frame = 0
Query:    1 LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRL---VPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            L  +P++GL +G  Y L +YG+ GYA MSAP+L  ALI+   +  LT+T   +   S  +   +RL   +P+ D  +  Q   DRD +A        L  PL    I ++H        Y  +F C + F  +CSEL +D S+L+ P+P  D  T+   + QC +L + + +G+  V ++R L+L  PG FP +D  A RLN++ R LRR+LS    +Y
Sbjct:   91 LSDNPMLGLLLGKSYLLESYGLLGYAFMSAPTLRHALIVLRNYGPLTFTLFQVNFLSEGNKGTLRLSPDIPVPD--DLLQYYVDRDLTAAVNGGRGALRVPLEPRHIQVMHGTQRLRNTYERHFGCSISFSAECSELQLDASLLDVPMPLGDSETSATCQQQCRLLLARMRAGSTFVDKVRGLILARPGYFPDIDYVAERLNMTSRTLRRRLSAEDSSY 307          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A661E2A6_9GAMM (Arabinose_bd domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661E2A6_9GAMM)

HSP 1 Score: 138 bits (348), Expect = 8.800e-37
Identity = 69/195 (35.38%), Postives = 110/195 (56.41%), Query Frame = 0
Query:    1 LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAA 195
            L  D  +GLAIG++ HL +YG++G+AVMSA +L  A+ L  R I L++TC    L    + A  R+ PL DY     V++DR+ +A++LI  EL+   L    I+ +H   +   +YA +F CPV+FG Q +E+ + R +L   +  +   +  +   QCE+L S     + +V E+R L+L  P  FP ++  A
Sbjct:   70 LSDDRYLGLAIGSEIHLADYGMFGFAVMSAKTLRQAIELGMRLISLSFTCFKHELIEEGELAIHRMTPLMDYGNFLNVMSDREIAAVYLIYQELVRENLSTIEINTVHNGGDTPSRYAQHFGCPVNFGCQFNEIIVPRELLNKTVSDTSDESRELCIQQCELLISQQSKQSDLVNEVRHLILSRPSYFPGIETVA 264          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A3L7E1Q2_9GAMM (Helix-turn-helix domain-containing protein n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7E1Q2_9GAMM)

HSP 1 Score: 140 bits (352), Expect = 1.320e-36
Identity = 71/219 (32.42%), Postives = 120/219 (54.79%), Query Frame = 0
Query:    1 LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRL---VPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            L  +P++GL +G  Y + +YG+ GYA +SAP+L  A+++   +  LTY+   +   +      +RL   +P+ D  +      DRD +A        L +PL    + ++H        Y  +FRCPV F  +CSELH+D S L+ P+P  D  T+   + QC +L + + +G+  V ++R L++  PG+FP +D  A RL+++ R LRR+LS    ++
Sbjct:   66 LSDNPMLGLLLGKSYRMESYGMLGYAFLSAPTLRQAMMVLRSYGPLTYSLFQVNFLTDGCRGILRLSPDIPVPD--DLFNFYVDRDLTAAVDGGRGALRKPLEPRHVQVMHAGQGQRRIYTRHFRCPVSFSAECSELHLDASQLDVPMPLGDTETSATCQQQCRLLLARMRAGSTFVDKVRGLIMARPGHFPDIDAVAGRLHMTSRTLRRRLSAEDSSF 282          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: UPI0019E836F5 (AraC family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019E836F5)

HSP 1 Score: 140 bits (352), Expect = 1.440e-36
Identity = 73/216 (33.80%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    1 LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            L  D  +GLAIG+Q HL +YG++G+A+M A +L  A++L  R I L++T     L      A  R+ PL DY +   V++DR+ SA++LI  EL+   LP+  I+ +H   +    Y  +F CPV+FG   +E+ +   VL+  +  +   +  +   QCE+L S L   + ++ ++R  +L  PG FP +   A +++ S R LRR L+     Y
Sbjct:   64 LGDDRYLGLAIGSQIHLADYGMFGFAMMGARNLRQAILLGLRLIDLSFTGFKHELIEEGGTATHRMAPLLDYGDLLNVMSDREVSAVYLIYQELVRDKLPLVEINFVHLGGKSPSCYVKHFDCPVNFGMPFNEIVMPDEVLDRSVSDTSKESRELCIQQCELLISGLSKQSNLIDDVRYAILAKPGYFPDIGTIAEQMHKSSRTLRRHLAAHNTNY 279          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A5P9NNJ7_9GAMM (AraC family transcriptional regulator n=1 Tax=Halioglobus maricola TaxID=2601894 RepID=A0A5P9NNJ7_9GAMM)

HSP 1 Score: 136 bits (343), Expect = 2.860e-35
Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 0
Query:    1 LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVP-LRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            L  +P++GL +G  Y + +YG+ GYA +SA +L  AL +   F  L ++  +I  + A     + + P LR   +      DRD +A     S  L  P+   ++ L+H+       Y  +F CPV FG   SELH+D + L+ P+P  D  T+ M + QC +L S +  G  I  ++RQ++L  PG FP +D  A +LN + R LRR+L+    +Y
Sbjct:   66 LTGNPMLGLLLGKAYRIESYGLLGYAFLSASTLRHALAVMQNFGPLAFSPFEINFRVAGGRGILSMRPGLRLPEDLLTFYIDRDITAAIHGSSGSLREPIEPMQVKLMHDGQGRELIYERHFDCPVSFGNNASELHMDAAALDEPMPLRDSETSAMMQQQCRLLLSRVRGGGNIGDKVRQIILSRPGYFPDIDFVAEKLNTTSRTLRRRLARENSSY 282          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A076N014_AMYME (Putative transcriptional regulator n=1 Tax=Amycolatopsis methanolica 239 TaxID=1068978 RepID=A0A076N014_AMYME)

HSP 1 Score: 135 bits (339), Expect = 1.230e-34
Identity = 74/217 (34.10%), Postives = 113/217 (52.07%), Query Frame = 0
Query:    1 LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYA-EQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            L   P +GL  G +YHL  YGIWG+A++S+P+L  A+ +  R++ LTY+   +T   A D   + L       E  + + +RD +A+  I  ELL  P  +HR+            +Y   F    +FG     +  DR+ L+SPLP ++P T  ++E QC  L     +   +   +R++LL  P   P V E A RL++SPR LRR+LS  G +Y
Sbjct:   64 LGDPPGLGLDAGLRYHLTTYGIWGFALISSPTLRSAISVGLRYLDLTYSFCRMTPVEAGDELTLVLDASAAPEELRRFLLERDAAAIHTIQRELLAAPSRLHRVSFAFAPPAGGLARYTEVFGLRPEFGAAADSVSFDRASLDSPLPQAEPLTASLAEAQCRRLLEQRRTRTGLPNRVREVLLGRPQAPPTVVEVASRLHLSPRTLRRRLSEEGTSY 280          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: UPI001CD78610 (AraC family transcriptional regulator n=1 Tax=Pseudomonas fluorescens TaxID=294 RepID=UPI001CD78610)

HSP 1 Score: 130 bits (328), Expect = 3.530e-33
Identity = 71/212 (33.49%), Postives = 109/212 (51.42%), Query Frame = 0
Query:    5 PLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            P +GL +G  Y L NYGIWG+A++S+P+  +A+ L  R++GLTY  HD+     DD   + LVP     E    + +RD S +  +  ELLG    + R++L     +    Y         FG + +     R +L+ PL  ++P   +  E QC +L +  +    +  +IR LLLE PG  P + +AA RL++S R LRR L   G  +
Sbjct:   56 PGLGLYMGHNYRLNNYGIWGFALLSSPTFREAVHLGIRYLGLTYAFHDVHQVEHDDEVHLLLVPREMPEELQAFVLERDLSGMLQVQRELLGESSSLLRVELTLPEPDDPSPYTKEIGVLPLFGQRDNRFVFPRHLLDLPLTGANPQAMQACEKQCLLLLAKRNQRGGLAGQIRNLLLECPGRMPDMAQAAARLHLSTRTLRRHLEAEGSNF 267          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A3L7E1G8_9GAMM (Helix-turn-helix domain-containing protein n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7E1G8_9GAMM)

HSP 1 Score: 129 bits (325), Expect = 1.320e-32
Identity = 71/215 (33.02%), Postives = 116/215 (53.95%), Query Frame = 0
Query:    4 DPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLV-PLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCP-VDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
             P+IGL +G  +    YG++GYA++SA +   AL +A  F  LT++        ++      +  P     +   +  DRD SA  +  SE++G P P+ ++ L H+     + Y  YF C  V+FG   +    DR +L++PLP SDP ++R  + QC +L + L +  + + E+R L+L  PG FP ++  A R+ +S R LRR+L N G T+
Sbjct:   69 SPVIGLKLGEPFIPQRYGLFGYALLSAETFRHALAIAENFGRLTFSFFSFHFGVSEGRGWFSMDNPPPIEQDLIDLYIDRDMSAANVDFSEIMGAPFPIQQLLLPHDGKGRKQVYRDYFGCSSVEFGAADARFCFDRELLDTPLPRSDPDSSRHLQQQCRMLIAKLTAHGSFIDEVRLLMLARPGFFPDIEYVAERMGMSTRTLRRKLKNEGSTF 283          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A848KIL9_9NOCA (AraC family transcriptional regulator n=2 Tax=Antrihabitans stalactiti TaxID=2584121 RepID=A0A848KIL9_9NOCA)

HSP 1 Score: 130 bits (327), Expect = 1.560e-32
Identity = 70/210 (33.33%), Postives = 117/210 (55.71%), Query Frame = 0
Query:    7 IGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            +GL +G++Y +  +GI+GYA++S+PSL DA+ +A R++ L++T     +   +D     L   R  A+  Q++ +RD +A+F+++++L+GR LP+ RI+       Y+ +Y   FR    F    +    D      PLP ++  T  M   QC  L S   +   I  E+R+ L++  G    +DE AR LN+S R LRR+L+ AG +Y
Sbjct:  124 LGLHLGSRYRVTTFGIFGYAMISSPSLRDAVEVALRYLELSFTFCIPVVTIGEDEVVATLRSERVPADVRQLLFERDMTAMFVVLTDLIGRKLPLRRIEFEFPRPSYSREYYEIFRTEPHFDCADTLFAFDPVEFAQPLPQANEHTLAMCVAQCRDLVSRRRARTGIAHEVRERLIQLGGAPAGIDELARELNMSTRTLRRRLTEAGTSY 333          
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Match: A0A5S9QVA5_9GAMM (Putative HTH-type transcriptional regulator n=2 Tax=Zhongshania aliphaticivorans TaxID=1470434 RepID=A0A5S9QVA5_9GAMM)

HSP 1 Score: 129 bits (325), Expect = 1.860e-32
Identity = 67/213 (31.46%), Postives = 117/213 (54.93%), Query Frame = 0
Query:    4 DPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTCHDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLPMHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDPCTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNVSPRGLRRQLSNAGQTY 216
            +P IGL +G+ Y L  +GI+GYA+MSA ++ DAL LA+ ++ L++   + +L        M +      A+   ++ +R+ +A  +I+  L+G    +H + + H       +Y  YF CP+ F  + + L     ++ +P+   D  T  +   +CE L++ L     IV E+R+ +L  PG FP ++E A++LN+S R LRR+LS+ G  Y
Sbjct:   87 NPAIGLKVGSCYPLSLFGIYGYALMSAATVSDALKLAYEYVELSFAFLEHSLSFRGSNVVMSMSSDDYSADDISMLNEREMTATLMILRGLIGEDFSLHSVSMRHSQQAPLMEYKKYFDCPIHFDAEENTLVFSAELINTPVLQCDSETANLCIDRCERLKARLTEEYNIVDEVREQILLRPGYFPNIEELAQKLNMSGRTLRRKLSSHGSGY 299          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103764.807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4R5LVS9_9GAMM1.050e-3735.16AraC family transcriptional regulator n=2 Tax=Seon... [more]
A0A661E2A6_9GAMM8.800e-3735.38Arabinose_bd domain-containing protein (Fragment) ... [more]
A0A3L7E1Q2_9GAMM1.320e-3632.42Helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI0019E836F51.440e-3633.80AraC family transcriptional regulator n=1 Tax=Prot... [more]
A0A5P9NNJ7_9GAMM2.860e-3533.64AraC family transcriptional regulator n=1 Tax=Hali... [more]
A0A076N014_AMYME1.230e-3434.10Putative transcriptional regulator n=1 Tax=Amycola... [more]
UPI001CD786103.530e-3333.49AraC family transcriptional regulator n=1 Tax=Pseu... [more]
A0A3L7E1G8_9GAMM1.320e-3233.02Helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A848KIL9_9NOCA1.560e-3233.33AraC family transcriptional regulator n=2 Tax=Antr... [more]
A0A5S9QVA5_9GAMM1.860e-3231.46Putative HTH-type transcriptional regulator n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032687HTH-type transcriptional regulator AraC-type, N-terminalPFAMPF12625Arabinose_bdcoord: 3..145
e-value: 2.0E-28
score: 99.8
NoneNo IPR availablePANTHERPTHR47894FAMILY NOT NAMEDcoord: 1..216
NoneNo IPR availablePANTHERPTHR47894:SF1coord: 1..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103764contigM-pyrifera_M_contig103764:2..649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103764.807.1mRNA_M-pyrifera_M_contig103764.807.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103764 2..649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103764.807.1 ID=prot_M-pyrifera_M_contig103764.807.1|Name=mRNA_M-pyrifera_M_contig103764.807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
LWQDPLIGLAIGAQYHLPNYGIWGYAVMSAPSLEDALILAFRFIGLTYTC
HDITLQSADDGACMRLVPLRDYAECTQVITDRDTSALFLIVSELLGRPLP
MHRIDLLHEASEYAEQYAAYFRCPVDFGTQCSELHIDRSVLESPLPHSDP
CTTRMSEYQCEILQSTLHSGAAIVTEIRQLLLETPGNFPPVDEAARRLNV
SPRGLRRQLSNAGQTY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032687AraC-type_N