prot_M-pyrifera_M_contig103752.804.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103752.804.1
Unique Nameprot_M-pyrifera_M_contig103752.804.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length170
Homology
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BLAST of mRNA_M-pyrifera_M_contig103752.804.1 vs. uniprot
Match: A0A667ZST2_9TELE (Plakophilin 3 n=6 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZST2_9TELE)

HSP 1 Score: 55.5 bits (132), Expect = 7.680e-6
Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:   89 ARDEAR--KAIPSLLQLAQCDNPVLRAHAAGALLNLCIQNISNRVALRDAGGISVLVENVREGSDE 152
            A+DE R  K I  L++L  CDN  ++ +A GA  NL  +N+ N+VAL + GGI+ L+E ++E  DE
Sbjct:  381 AKDEVRRYKGISELVRLFNCDNQEVQRYATGATRNLIYENMDNKVALIEEGGIAQLIEALKENDDE 446
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BLAST of mRNA_M-pyrifera_M_contig103752.804.1 vs. uniprot
Match: A0A8J7NUX7_ATRSP (PKP3 protein (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NUX7_ATRSP)

HSP 1 Score: 53.1 bits (126), Expect = 4.890e-5
Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 0 
Query:   76 AAALRNVIAEHAGARDEAR--KAIPSLLQLAQCDNPVLRAHAAGALLNLCIQNISNRVALRDAGGISVLVENVREGSDE 152
            AA +++    ++ A+ +AR  KAIP+L++L   D+  ++ +A GA+ NL  +N+ N+ AL +AGGI  L+E +RE  DE
Sbjct:  437 AAYIQHECYHNSDAKTQARQLKAIPALVKLFNSDSQDVQRYATGAMRNLIYENLDNKSALIEAGGIPQLIEALREPDDE 515
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BLAST of mRNA_M-pyrifera_M_contig103752.804.1 vs. uniprot
Match: A0A484D2R6_PERFV (Uncharacterized protein n=19 Tax=Percidae TaxID=8165 RepID=A0A484D2R6_PERFV)

HSP 1 Score: 52.8 bits (125), Expect = 6.510e-5
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:   89 ARDEAR--KAIPSLLQLAQCDNPVLRAHAAGALLNLCIQNISNRVALRDAGGISVLVENVREGSDE 152
            A++E R  K I  L++L  CDN  ++ +A GA  NL  +N+ N+VAL + GGI  LVE ++E  DE
Sbjct:  408 AKNEVRRLKGIGELVRLFNCDNQEVQRYATGATRNLIYENMDNKVALIEEGGIPQLVEALKESDDE 473
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BLAST of mRNA_M-pyrifera_M_contig103752.804.1 vs. uniprot
Match: A0A556TLA6_BAGYA (Plakophilin-3 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556TLA6_BAGYA)

HSP 1 Score: 52.8 bits (125), Expect = 6.640e-5
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:   95 KAIPSLLQLAQCDNPVLRAHAAGALLNLCIQNISNRVALRDAGGISVLVENVREGSDEGRTDAALALQLLA 165
            KAIP+L+QL   +N  ++ +A GA  NL  +N+ N+ AL +AGGIS LV  ++E  DE R +    L  L+
Sbjct:  544 KAIPALVQLYSSENQEVQRYATGATRNLIYENMENKTALIEAGGISKLVSALKELDDELRKNVTGILWNLS 614
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103752.804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A667ZST2_9TELE7.680e-643.94Plakophilin 3 n=6 Tax=Myripristis murdjan TaxID=58... [more]
A0A8J7NUX7_ATRSP4.890e-539.24PKP3 protein (Fragment) n=1 Tax=Atractosteus spatu... [more]
A0A484D2R6_PERFV6.510e-543.94Uncharacterized protein n=19 Tax=Percidae TaxID=81... [more]
A0A556TLA6_BAGYA6.640e-542.25Plakophilin-3 n=1 Tax=Bagarius yarrelli TaxID=1757... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 86..124
e-value: 8.4
score: 13.8
coord: 126..166
e-value: 14.0
score: 12.2
coord: 43..84
e-value: 0.076
score: 22.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 9..169
e-value: 1.3E-23
score: 85.5
NoneNo IPR availablePANTHERPTHR23315BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAININGcoord: 26..169
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 17..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103752contigM-pyrifera_M_contig103752:111..620 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103752.804.1mRNA_M-pyrifera_M_contig103752.804.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103752 87..620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103752.804.1 ID=prot_M-pyrifera_M_contig103752.804.1|Name=mRNA_M-pyrifera_M_contig103752.804.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
MRATCGLKVPVARIQQILQALKKHEKSDHGPALAQVLWVLSRNTENCLSI
VAEGGVDILIQAVREELSLECRGTAAAALRNVIAEHAGARDEARKAIPSL
LQLAQCDNPVLRAHAAGALLNLCIQNISNRVALRDAGGISVLVENVREGS
DEGRTDAALALQLLAEDGRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold