prot_M-pyrifera_M_contig103601.763.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103601.763.1
Unique Nameprot_M-pyrifera_M_contig103601.763.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length177
Homology
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: A0A8D8IJB1_CULPI (Probable E3 ubiquitin-protein ligase HERC4 (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8IJB1_CULPI)

HSP 1 Score: 130 bits (326), Expect = 1.260e-33
Identity = 72/187 (38.50%), Postives = 107/187 (57.22%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELG--------RRGGGTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSG-ERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTY-VSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+ +   DG L T G NDHG+LG        +R   ++++ + A+E + V+  + G   ++ +T+ G +F+WG+   GQLG   + VS P PR+++      +  +  G +H LAL ++GELFAWG+NEYGQLG GT      + TLVK + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:   47 HTLLLTNDGKLYTCGNNDHGQLGHDTNNLPNKRPRMSQFKFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 233          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: A0A8D8BT93_CULPI (Probable E3 ubiquitin-protein ligase HERC4 (Fragment) n=9 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8BT93_CULPI)

HSP 1 Score: 130 bits (326), Expect = 7.470e-33
Identity = 72/187 (38.50%), Postives = 107/187 (57.22%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELG--------RRGGGTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSG-ERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTY-VSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+ +   DG L T G NDHG+LG        +R   ++++ + A+E + V+  + G   ++ +T+ G +F+WG+   GQLG   + VS P PR+++      +  +  G +H LAL ++GELFAWG+NEYGQLG GT      + TLVK + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:   47 HTLLLTNDGKLYTCGNNDHGQLGHDTNNLPNKRPRMSQFKFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 233          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: B0XB49_CULQU (Hect E3 ubiquitin ligase (Fragment) n=1 Tax=Culex quinquefasciatus TaxID=7176 RepID=B0XB49_CULQU)

HSP 1 Score: 130 bits (326), Expect = 8.440e-32
Identity = 72/182 (39.56%), Postives = 104/182 (57.14%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELGRRGGGTRWRR---VDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSG-ERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTY-VSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+ +  +DG L T G NDHG+LG        +R   + A+E + V+  + G   ++ +T+ G +F+WG+   GQLG   + VS P PR+++      +  +  G +H LAL ++GELFAWG+NEYGQLG GT      + TLVK + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:   47 HTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: B0X7X1_CULQU (Hect E3 ubiquitin ligase n=12 Tax=Culex TaxID=53527 RepID=B0X7X1_CULQU)

HSP 1 Score: 130 bits (326), Expect = 1.080e-31
Identity = 72/182 (39.56%), Postives = 104/182 (57.14%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELGRRGGGTRWRR---VDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSG-ERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTY-VSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+ +  +DG L T G NDHG+LG        +R   + A+E + V+  + G   ++ +T+ G +F+WG+   GQLG   + VS P PR+++      +  +  G +H LAL ++GELFAWG+NEYGQLG GT      + TLVK + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:   47 HTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: A0A182WWM0_ANOQN (HECT domain-containing protein n=1 Tax=Anopheles quadriannulatus TaxID=34691 RepID=A0A182WWM0_ANOQN)

HSP 1 Score: 127 bits (320), Expect = 7.120e-31
Identity = 68/182 (37.36%), Postives = 102/182 (56.04%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELGRRGG---GTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLG-SGERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTYVSAAS-PTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+    ++G +   G NDHG+LG         R +R+ ++E + ++C + G   ++ +T+ G VF+WG+   GQLG   E    P PR+++     H+  + +G+ H LAL + GEL+AWGSN YGQLG GT       PTL++ + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:  385 HTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 566          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: A0A182ILN7_9DIPT (Uncharacterized protein n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182ILN7_9DIPT)

HSP 1 Score: 126 bits (317), Expect = 1.830e-30
Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELGRRGGGTRWRR---VDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSGERVS-VPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTYVSAAS-PTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+    +DG +   G NDHG+LG        +R   + +++ + ++ A+ G   ++ +T+ G +F+WG+   GQLG    V   P PRL++     H+  + +G+ H LAL ++GEL+AWGSN YGQLG GT     S PTLVK + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:  719 HTLFLTKDGKMYACGNNDHGQLGHDTSALPNKRPQLITSLDDYIITQASCGTAHSLALTNWGQLFSWGSNALGQLGHELEVGRQPTPRLIKPIAAKHVVQIASGQYHCLALTNSGELYAWGSNAYGQLGIGTTSEKVSTPTLVKSLAGVPLAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 900          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: W5JA25_ANODA (Hect E3 ubiquitin ligase n=3 Tax=Anopheles darlingi TaxID=43151 RepID=W5JA25_ANODA)

HSP 1 Score: 124 bits (311), Expect = 1.170e-29
Identity = 71/189 (37.57%), Postives = 106/189 (56.08%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELG--------RRGGGTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSGERVSVPR---PRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDG-TYVSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+ +   DG + + G NDHG+LG        +R   +R++ + A+E + ++ A  G   ++ +T+ G V++WG+   GQLG  +     R   PRL+R      +  + AG  H LAL ++GEL+AWGSN YGQLG G T    ++PTLV+ + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:  720 HTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPRMSRFKLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLG--QETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 906          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: UPI0016410FC4 (probable E3 ubiquitin-protein ligase HERC4 isoform X4 n=2 Tax=Anopheles albimanus TaxID=7167 RepID=UPI0016410FC4)

HSP 1 Score: 124 bits (311), Expect = 1.170e-29
Identity = 70/187 (37.43%), Postives = 105/187 (56.15%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELG--------RRGGGTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGS-GERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDG-TYVSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+ +   DG + + G NDHG+LG        +R   +R++ + A+E + ++ A  G   ++ +T+ G V++WG+   GQLG   +      PRL+R      +  + AG  H LAL ++GEL+AWGSN YGQLG G T    ++PTLV+ + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:  723 HTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPRMSRFKLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQESDTARQIVPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 909          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: A0A182SGY7_9DIPT (Uncharacterized protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182SGY7_9DIPT)

HSP 1 Score: 120 bits (302), Expect = 1.320e-29
Identity = 67/182 (36.81%), Postives = 100/182 (54.95%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELGRRGG---GTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSG-ERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGTYVSAAS-PTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            H+    ++G +   G NDHG+LG         R + + ++E + ++  + G   +V +T+ G VF+WG+   GQLG   E    P PR+++     H+  + +G+ H LAL ++GEL+ WGSN YGQLG GT       PTLV+ + G P+     G NHS AV+  G  + WG N  GQLG
Sbjct:   18 HTLFLTKEGKMYACGNNDHGQLGHDNDTLPNKRPQLLTSLENYIITHVSCGTAHSVALTNWGQVFSWGSNAVGQLGHDTENGRQPIPRMIKAIGAKHVVQIASGQYHCLALTNSGELYGWGSNSYGQLGIGTTNEKVPIPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 199          
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Match: UPI001A99EDE0 (probable E3 ubiquitin-protein ligase HERC3 isoform X2 n=1 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A99EDE0)

HSP 1 Score: 123 bits (309), Expect = 2.020e-29
Identity = 73/179 (40.78%), Postives = 96/179 (53.63%), Query Frame = 0
Query:    1 HSAVAREDGVLLTSGRNDHGELGRRGGGTRWRRVDAMEAHSVSCAAVGEGFTVVVTSTGAVFAWGAGERGQLGSG-ERVSVPRPRLLRGFRDTHICAVRAGEAHVLALADTGELFAWGSNEYGQLGDGT-YVSAASPTLVKGMVGRPVRRFDAGSNHSVAVTAFGTAYSWGDNRHGQLG 177
            HS     DG + T G N  G+LG    GT    VDA++A  ++  + G   +V V   G VFAWGAGE GQLG G    +V  PRL++   +  I  V  G  H +AL+  G+LF WG N  GQLG G    S   P  +K + G P+ +  AG +HS A++  G  + WG NR GQLG
Sbjct:   44 HSTFLLHDGSVYTCGSNSCGQLGHSKPGTSPELVDALDAQIITMVSSGRSHSVAVNEQGQVFAWGAGEEGQLGLGIAEATVRIPRLVKRLCEQRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLG 222          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103601.763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D8IJB1_CULPI1.260e-3338.50Probable E3 ubiquitin-protein ligase HERC4 (Fragme... [more]
A0A8D8BT93_CULPI7.470e-3338.50Probable E3 ubiquitin-protein ligase HERC4 (Fragme... [more]
B0XB49_CULQU8.440e-3239.56Hect E3 ubiquitin ligase (Fragment) n=1 Tax=Culex ... [more]
B0X7X1_CULQU1.080e-3139.56Hect E3 ubiquitin ligase n=12 Tax=Culex TaxID=5352... [more]
A0A182WWM0_ANOQN7.120e-3137.36HECT domain-containing protein n=1 Tax=Anopheles q... [more]
A0A182ILN7_9DIPT1.830e-3038.46Uncharacterized protein n=1 Tax=Anopheles atroparv... [more]
W5JA25_ANODA1.170e-2937.57Hect E3 ubiquitin ligase n=3 Tax=Anopheles darling... [more]
UPI0016410FC41.170e-2937.43probable E3 ubiquitin-protein ligase HERC4 isoform... [more]
A0A182SGY7_9DIPT1.320e-2936.81Uncharacterized protein n=1 Tax=Anopheles maculatu... [more]
UPI001A99EDE02.020e-2940.78probable E3 ubiquitin-protein ligase HERC3 isoform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 149..165
score: 28.43
coord: 165..177
score: 37.78
coord: 10..26
score: 34.31
coord: 61..77
score: 28.43
coord: 111..127
score: 34.31
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 59..107
e-value: 6.0E-12
score: 46.0
coord: 111..159
e-value: 3.5E-12
score: 46.8
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 111..162
score: 14.685
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 163..177
score: 9.399
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 59..110
score: 14.584
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..177
e-value: 8.2E-51
score: 174.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..177
NoneNo IPR availablePANTHERPTHR46207FAMILY NOT NAMEDcoord: 91..177
coord: 2..75
coord: 51..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103601contigM-pyrifera_M_contig103601:121..651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103601.763.1mRNA_M-pyrifera_M_contig103601.763.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103601 121..651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103601.763.1 ID=prot_M-pyrifera_M_contig103601.763.1|Name=mRNA_M-pyrifera_M_contig103601.763.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
HSAVAREDGVLLTSGRNDHGELGRRGGGTRWRRVDAMEAHSVSCAAVGEG
FTVVVTSTGAVFAWGAGERGQLGSGERVSVPRPRLLRGFRDTHICAVRAG
EAHVLALADTGELFAWGSNEYGQLGDGTYVSAASPTLVKGMVGRPVRRFD
AGSNHSVAVTAFGTAYSWGDNRHGQLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II