prot_M-pyrifera_M_contig103545.755.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103545.755.1
Unique Nameprot_M-pyrifera_M_contig103545.755.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length129
Homology
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BLAST of mRNA_M-pyrifera_M_contig103545.755.1 vs. uniprot
Match: A0A7S1G4R3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4R3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.920e-7
Identity = 38/124 (30.65%), Postives = 67/124 (54.03%), Query Frame = 0 
Query:    6 LHPNIPLSSAFSVNWIVILLLLLVGFNDPLFALHFVFPRGFWAFLSLLGQLAFLTALLTFWLCEVGLL------ALADPREATMRWFFLPKLIPMVLLFLILLGLYSANLINSINNPLYDWKQE 123
            LHP  P + ++   W ++L++LL GFNDPLFAL    P    A +S +    FL+A+L FWLC + ++      A A P+   +  F+ PK++ +   +L  + +Y    +    +P Y+ +++
Sbjct:  221 LHPR-PETRSYEQRWTLVLMVLLCGFNDPLFALDVFVPSVALAVVSAVMTTTFLSAVLLFWLCVLDVIRISSSGASAPPKRGWL--FYAPKVLLIGAFWLCTMLIYVWTRMREAEDPTYEARED 341
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BLAST of mRNA_M-pyrifera_M_contig103545.755.1 vs. uniprot
Match: A0A814GG72_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814GG72_9BILA)

HSP 1 Score: 52.0 bits (123), Expect = 4.150e-5
Identity = 38/110 (34.55%), Postives = 57/110 (51.82%), Query Frame = 0 
Query:   12 LSSAFSVNWIVILLLLLVGFNDPLFALHFVFPRGFWAFLSLLGQLAFLTALLTFWLCEVGLLALADPREATMRW--FFLPKLIPMVLLFLILLGLYSANLINSINNPLYD 119
            L  +    W+V+LL+LLV +NDP + L F+    F + L  L Q  FL  L+ FWL           R+   R+  F+LPKLI + LL++  + L S    N + +P Y+
Sbjct: 1139 LDWSLEQRWMVLLLVLLVFYNDPFYPLTFLIDSAFPSILDGLLQATFLCTLMLFWLSVYH-----GVRQTVRRFLPFYLPKLILVGLLWIFAIVLSSWRTFNEMKDPTYN 1243
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103545.755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S1G4R3_9STRA1.920e-730.65Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A814GG72_9BILA4.150e-534.55Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06664MIG-14_Wnt-bdcoord: 2..122
e-value: 3.7E-17
score: 62.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 108..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..45
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
IPR040416Transmembrane protein 181PANTHERPTHR31918FAMILY NOT NAMEDcoord: 16..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103545contigM-pyrifera_M_contig103545:207..593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103545.755.1mRNA_M-pyrifera_M_contig103545.755.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103545 207..593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103545.755.1 ID=prot_M-pyrifera_M_contig103545.755.1|Name=mRNA_M-pyrifera_M_contig103545.755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
WFVCCLHPNIPLSSAFSVNWIVILLLLLVGFNDPLFALHFVFPRGFWAFL
SLLGQLAFLTALLTFWLCEVGLLALADPREATMRWFFLPKLIPMVLLFLI
LLGLYSANLINSINNPLYDWKQELGASLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040416TMEM181