prot_M-pyrifera_M_contig103514.750.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103514.750.1
Unique Nameprot_M-pyrifera_M_contig103514.750.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
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BLAST of mRNA_M-pyrifera_M_contig103514.750.1 vs. uniprot
Match: A0A7X5WS34_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WS34_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 9.390e-44
Identity = 86/167 (51.50%), Postives = 112/167 (67.07%), Query Frame = 0 
Query:    2 VVAAIMLLAAGCGDD-----------GDASPFGPG----DLGSSDAADDA-ASDLLEDLADGSLDEGDLDDLMDSAEDMMESFGGEGSGTATVNGDTIEFTSEVCFAGQGDFTLEGPGTSSDGTPVWVSISHTVESREELAEFMDDDMIDTIYGDADPIISSQVFIE 152
            VVA + LLAAGCG D           GD + FG G    DLG  +        ++ ED+  G   E  + DL+++AED+ ESFG +G GT  +NG+TIEFTSE+CFAG GDFT+EG G + DGTPVWVSISH+ +SREE+ EFMD++M++ +YGDADPII S V +E
Sbjct:   10 VVALLALLAAGCGGDDGGPSLRDVAGGDGNGFGDGGDEPDLGDLEELTGVDIGEIAEDILSGEDPEEAMADLLENAEDLAESFGDDGRGTIEINGETIEFTSEICFAGFGDFTIEGLGAAGDGTPVWVSISHSEQSREEMLEFMDEEMVELLYGDADPIIDSSVSVE 176
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103514.750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X5WS34_9ACTN9.390e-4451.50Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103514contigM-pyrifera_M_contig103514:4..459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103514.750.1mRNA_M-pyrifera_M_contig103514.750.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103514 4..465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103514.750.1 ID=prot_M-pyrifera_M_contig103514.750.1|Name=mRNA_M-pyrifera_M_contig103514.750.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MVVAAIMLLAAGCGDDGDASPFGPGDLGSSDAADDAASDLLEDLADGSLD
EGDLDDLMDSAEDMMESFGGEGSGTATVNGDTIEFTSEVCFAGQGDFTLE
GPGTSSDGTPVWVSISHTVESREELAEFMDDDMIDTIYGDADPIISSQVF
IE
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