prot_M-pyrifera_M_contig10334.705.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10334.705.1
Unique Nameprot_M-pyrifera_M_contig10334.705.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10334.705.1 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.980e-38
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0 
Query:    1 KVRERLGVVDATVELWLRRSATMLSRGGSETDTDILQAKRRIYGLKDEGRQLDSARVALGERLEDCRAKLDRIVQELELLGEDAVP 86
            KVR+RL VVDATVELW+RRSA MLSRGGSETDTD+LQAKRRIYGLK+EGRQLDSA V L  RLEDCRAKLDRIVQELE LGE A+P
Sbjct:  389 KVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIVQELEFLGEAAMP 474
[Close]
BLAST of mRNA_M-pyrifera_M_contig10334.705.1 vs. uniprot
Match: D8LRJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 7.400e-13
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    1 KVRERLGVVDATVELWLRRSATMLSRGGSETDTDILQAKRRIY 43
            KVR+RL VVDATVELW+RRSA MLSRGGSETDTD+LQ  RR +
Sbjct:  237 KVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQTMRRDH 279
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10334.705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5V9_9PHAE3.980e-3884.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRJ5_ECTSI7.400e-1379.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10334contigM-pyrifera_M_contig10334:4027..5789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10334.705.1mRNA_M-pyrifera_M_contig10334.705.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10334 4027..5789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10334.705.1 ID=prot_M-pyrifera_M_contig10334.705.1|Name=mRNA_M-pyrifera_M_contig10334.705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
KVRERLGVVDATVELWLRRSATMLSRGGSETDTDILQAKRRIYGLKDEGR
QLDSARVALGERLEDCRAKLDRIVQELELLGEDAVP
back to top