mRNA_M-pyrifera_M_contig10334.705.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10334.705.1 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE) HSP 1 Score: 142 bits (358), Expect = 3.980e-38 Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 1 Query: 1 KVRERLGVVDATVELWLRRSATMLSRGGSETDTDILQAKRRIYGLKDEGRQLDSARVALGERLEDCRAKLDRIVQELELLGEDAVP 258
KVR+RL VVDATVELW+RRSA MLSRGGSETDTD+LQAKRRIYGLK+EGRQLDSA V L RLEDCRAKLDRIVQELE LGE A+P
Sbjct: 389 KVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIVQELEFLGEAAMP 474
BLAST of mRNA_M-pyrifera_M_contig10334.705.1 vs. uniprot
Match: D8LRJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 7.400e-13 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 1 Query: 1 KVRERLGVVDATVELWLRRSATMLSRGGSETDTDILQAKRRIY 129
KVR+RL VVDATVELW+RRSA MLSRGGSETDTD+LQ RR +
Sbjct: 237 KVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQTMRRDH 279 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10334.705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10334.705.1 >prot_M-pyrifera_M_contig10334.705.1 ID=prot_M-pyrifera_M_contig10334.705.1|Name=mRNA_M-pyrifera_M_contig10334.705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp KVRERLGVVDATVELWLRRSATMLSRGGSETDTDILQAKRRIYGLKDEGRback to top mRNA from alignment at M-pyrifera_M_contig10334:4027..5789- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10334.705.1 ID=mRNA_M-pyrifera_M_contig10334.705.1|Name=mRNA_M-pyrifera_M_contig10334.705.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1763bp|location=Sequence derived from alignment at M-pyrifera_M_contig10334:4027..5789- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10334:4027..5789- >mRNA_M-pyrifera_M_contig10334.705.1 ID=mRNA_M-pyrifera_M_contig10334.705.1|Name=mRNA_M-pyrifera_M_contig10334.705.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig10334:4027..5789- (Macrocystis pyrifera P11B4 male)back to top |