prot_M-pyrifera_M_contig103292.695.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103292.695.1
Unique Nameprot_M-pyrifera_M_contig103292.695.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length216
Homology
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A5A8D7R4_CAFRO (ERCC4 domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7R4_CAFRO)

HSP 1 Score: 137 bits (346), Expect = 8.040e-34
Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 0
Query:   13 ELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRFGK--VGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDS--QAPEVVELAQPLSPRMQTLQR 214
            E+ A D  LV+  GMGL  ++ +F+         + VLG + D+  +R ++  +G+    LPV I+    AA R  AY RGG V++++RI ++DLLTRR     V G+LV    R TE+S EAFC+R+ R+ +P  +VKG S  P  + SG +R E  L++L + QL LWPRF +     L +  ++PEVV+L+ PL+P +  LQR
Sbjct:   70 EVLAEDGLLVVARGMGLRLLLERFIRVFCGGRSLVAVLGCSHDSDTIRASLSEAGVSEDHLPVAITNEMSAAARVSAYQRGGPVIVTSRILVIDLLTRRLPAEAVAGMLVAGAHRLTEASSEAFCLRLFRDANPSGFVKGFSDDPGRLASGFNRLESSLKLLGVRQLHLWPRFHALAQAGLTAPRRSPEVVDLSVPLTPCVLALQR 275          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A2P4XA07_9STRA (DNA repair endonuclease XPF n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XA07_9STRA)

HSP 1 Score: 119 bits (299), Expect = 5.420e-29
Identity = 74/212 (34.91%), Postives = 114/212 (53.77%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 213
            LP++    +EL+  D  LVMG G+GL  V+  F+         +L L     A  LR  +   GL    LP  + A     ER++ Y RGG+  ++ARI +VDLL+     G + G+LV      TE+S EAF +R+ RE++ D ++KG      A++SG +R E++L+ L +  + L+PRF   V+  L+   PEV E+    SP M+ +Q
Sbjct:   29 LPYERDVVEELYTQDGVLVMGRGLGLLRVLASFVRLYCSPRCLVLCLNANEQAATLRRLVLTLGLDRRLLPRVVDARNNLNERQQMYKRGGVFFVTARILVVDLLSNHVDPGSISGLLVNDAHHVTETSIEAFILRLYRERNRDGFIKGFCDDSVALSSGFNRVEQVLKHLYVRNVFLYPRFHVAVNSCLEKHQPEVYEIEVAFSPSMKIMQ 240          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A1X7VB04_AMPQE (ERCC4 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VB04_AMPQE)

HSP 1 Score: 124 bits (310), Expect = 5.440e-29
Identity = 72/217 (33.18%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNA-VDAWHLRWNMRLS-GLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTR--RFGKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 216
            L F+++   EL + D  +++ +G+GL+ +  KFL   +     +LV+G++ +   H + ++  S    I Q+P  ++   PA ER   Y +GG++ +++RI +VD+L +     KV G+LV    R T+SS EAF +R+ RE +   ++KG S  P   T+G  + ER++R L +  + LWPRF + V+ SL+   P+V+EL Q ++P M  +Q  +
Sbjct:    6 LDFENENFLELVSEDGLIILAKGLGLDRLFMKFLKLHSDPRNLVLVIGSSTLYEDHFKNDIAASLSNNIQQIPRSVTNEIPAKEREELYLKGGVLFVTSRILVVDMLRKVCPVDKVAGILVYNCHRVTDSSSEAFILRLYREGNKTGFIKGFSDCPEHFTTGFCQLERIMRNLFVKNVYLWPRFHAVVNSSLERHQPDVIELRQQMTPSMTAIQHSV 222          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A4D9D5Y9_9STRA (ERCC4 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Y9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.050e-28
Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 0
Query:   10 ASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETI-------LVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 216
            A ++L   D  LVM  G+G + +I +FL R A   ET+       L + +  D   L   +   G+   QLP  I+  T + +R+  Y++GG+ ++++RI IVDLLT+R    ++ G++V +  R T+ S EAF +R+ REQ+   ++K  S  P A+  G  R ER+L+   L ++ LWPR+   V   L    PEVVE+AQ L+P M+ +Q+ I
Sbjct:    9 AFEDLMDEDGLLVMARGLGKQLLIARFLRRHA---ETLPGACVLCLHMSSLADNQLLTRALLAEGMAPEQLPRIITNDTVSTDRQALYTQGGVFLVTSRILIVDLLTKRLDVSRIRGMVVNHAHRVTDVSIEAFIIRVYREQNRTGFLKAFSDEPEALLQGFGRLERVLKYCYLRRVYLWPRYHVAVKNFLSRHEPEVVEMAQALTPAMKAVQQAI 221          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A1Y2GAL2_9FUNG (DNA repair protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAL2_9FUNG)

HSP 1 Score: 122 bits (306), Expect = 1.850e-28
Identity = 75/219 (34.25%), Postives = 128/219 (58.45%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLG-NAVDAWHLRWNMRLSGLPISQLPVH---ISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRFG--KVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 216
            L FQ +   EL A D  L+M +G+GL  +I  FL   +  +  +L++  NA +   LR ++  S   + +   +   I++    AER   Y  GGI+ +++RI ++DLLT R     + G+LV    R T +S EAF +R++R+ + +A++K  S +P + T G    E+ L++L L +++LWPRF   V+ESL+S + +V+E+ QP++  M+T+Q  I
Sbjct:    6 LAFQKEIVAELVAEDALLIMAKGLGLRSIIGAFLKIYSQPQNLVLLINTNAEEEAELRDDLARS-TDVGKGGAYFRTITSEQSLAERNDLYRYGGIMAVTSRILVMDLLTARIPIHLITGILVANAHRVTATSTEAFILRLLRQSNSEAFIKAFSDQPESFTVGFATLEKTLKLLYLRKVNLWPRFHVTVTESLESHSTDVIEIRQPMTKAMKTIQAAI 223          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A3M6VFJ6_9STRA (ERCC4 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFJ6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.880e-28
Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 213
            LP++ +  +EL+A D  LVMG G+GL  V+  F+         +L L     A  LR +M   GL    LP  + A     ER++ Y RGG+  ++ARI +VD L+       V G+LV      TE+S EAF +R+ RE++ + ++KG      A++SG +R E++L+ L +  + L+PRF   V+  L+   PEV E+    SP M+ +Q
Sbjct:   31 LPYEKEIVEELYAQDGVLVMGRGLGLLRVLASFVRLYCSPRSLVLCLNVNDQAATLRRSMLALGLDRHLLPRVVDARNSLNERQQMYKRGGVFFVTARILVVDFLSNHMDPASVSGLLVNDAHHVTETSMEAFILRLYRERNREGFIKGFCDDSVALSSGFNRMEQVLKHLYVRNVFLYPRFHVAVNSCLEKHQPEVYEIEVAFSPSMKIMQ 242          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A6G0KZF6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KZF6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.320e-28
Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 213
            LP++ +  +EL+A D  LV+G G+GL  V+  F+         +L L     A  LR  +   GL    LP  + A     ER++ Y RGG+  ++ARI +VDLL+     G + G+LV      TE+S EAF +R+ RE++ + ++KG      A++SG +R E++L+ L +  + L+PRF   +   L+   PEV E+    SP M+T+Q
Sbjct:   34 LPYEREIVEELYAQDGVLVLGRGLGLLRVLASFVRLYCSPRSLVLCLNANEQAATLRRLVLALGLDRRLLPRVVDARINLNERQQMYKRGGVFFVTARILVVDLLSNHVDPGTISGLLVNDAHHVTETSIEAFILRLYRERNREGFIKGFCGDSVALSSGFNRVEQVLKHLYVRDVFLYPRFHVAIHSCLEKYQPEVYEIEVAFSPSMKTMQ 245          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A4P9XS52_9FUNG (ERCC4 domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XS52_9FUNG)

HSP 1 Score: 122 bits (305), Expect = 2.540e-28
Identity = 77/213 (36.15%), Postives = 122/213 (57.28%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERR-RAYSRGGIVVLSARIGIVDLLTRRFGK--VGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 213
            LPFQ +   EL   D  LV+ +G+GL+ ++  FL +LA    T++VL NA      R  + L+ L  +Q+ +++      AE R  AY RGG++ +++RI +VDLL +R     + G+LV   ++ T  S EAF +R+ R+++ + ++K  +  P     G    E  L+ L L ++ LWPRF   V ESLD+ + EVVEL QP++ RM  +Q
Sbjct:    5 LPFQRQIFTELLEEDGLLVLAKGLGLQRLLAAFL-QLAAERHTLVVLLNAPADEEERLRLELAELTSAQVTLNVLKNDVKAEDRVEAYRRGGLISVTSRIFVVDLLKKRVPVPLITGILVANAQKVTPYSLEAFVLRLYRQENAEGFIKAFTESPETFGVGFAPLETTLKALQLRKVHLWPRFHVAVKESLDT-SEEVVELRQPMTDRMMHIQ 215          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A2D4BR62_PYTIN (DNA repair endonuclease XPF, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR62_PYTIN)

HSP 1 Score: 121 bits (303), Expect = 5.030e-28
Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 0
Query:    4 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRFGK--VGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 216
            LP +    +EL   D   VMG+G+GL  V+  F+   A  +  +L L  +  A          GL    LP  + A +  +ER + Y +GG  ++++RI +VDLL ++     + G+LV    R TE+S EAF +R+ R+ + + ++K  S  P A+++G  R E++L  L L Q+SL+PRF  ++ ESL  + P V E+    SPRM+T+Q  I
Sbjct:  542 LPHERAIVEELQRQDALXVMGKGLGLYRVLSYFVRLYASPQTLVLGLNMSEYAAQFHQLALALGLDRRFLPKVLDAKSSVSERMQLYKQGGCCLVTSRILVVDLLNQKLDSKMITGLLVNDAHRVTETSVEAFVLRVYRDANREGFIKAFSDDPVALSAGFSRMEQVLXQLYLRQVSLYPRFHVDIHESLSRRQPAVYEIEVAFSPRMKTMQEAI 756          
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A1Z5LEM3_ORNMO (DNA repair endonuclease xp-f-mei-9-rad1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LEM3_ORNMO)

HSP 1 Score: 120 bits (302), Expect = 6.300e-28
Identity = 69/215 (32.09%), Postives = 124/215 (57.67%), Query Frame = 0
Query:    2 PLLPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMR-LSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRR--FGKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 213
            PLL F+++   +LH  D  +++ +G+G+E ++   +   +     +L+LG   DA    + +R L    ++ LP  I+A     ER   Y  GG++ +++RI +VD+L  R     + G++V    +  ES QEAF +R+ R+++   ++KG+S    A T G  + +R++R L + +L LWPRF+++V  SL+ + PEV+E   P++P M T+Q
Sbjct:    2 PLLEFETQMFLDLHNEDGLVIVAKGLGVERLLLSLIKVNSDPGNLVLILGT--DANEEEFFIRQLEDENVNPLPRSITAECSTKERNDVYMSGGVLFVTSRILVVDMLMERVPIDLITGIIVYRAHKTLESCQEAFILRLYRQKNKKGFIKGLSDNAVAFTQGFCQVQRMMRNLFVKKLFLWPRFQADVISSLEKRKPEVLEFRVPMTPAMNTIQ 214          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D7R4_CAFRO8.040e-3439.81ERCC4 domain-containing protein n=4 Tax=Cafeteria ... [more]
A0A2P4XA07_9STRA5.420e-2934.91DNA repair endonuclease XPF n=1 Tax=Phytophthora p... [more]
A0A1X7VB04_AMPQE5.440e-2933.18ERCC4 domain-containing protein n=2 Tax=Amphimedon... [more]
A0A4D9D5Y9_9STRA1.050e-2835.65ERCC4 domain-containing protein n=1 Tax=Nannochlor... [more]
A0A1Y2GAL2_9FUNG1.850e-2834.25DNA repair protein n=1 Tax=Lobosporangium transver... [more]
A0A3M6VFJ6_9STRA1.880e-2834.91ERCC4 domain-containing protein n=2 Tax=Peronospor... [more]
A0A6G0KZF6_9STRA2.320e-2834.43Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A4P9XS52_9FUNG2.540e-2836.15ERCC4 domain-containing protein n=1 Tax=Thamnoceph... [more]
A0A2D4BR62_PYTIN5.030e-2834.42DNA repair endonuclease XPF, putative n=1 Tax=Pyth... [more]
A0A1Z5LEM3_ORNMO6.300e-2832.09DNA repair endonuclease xp-f-mei-9-rad1 (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 3..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103292contigM-pyrifera_M_contig103292:5..652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103292.695.1mRNA_M-pyrifera_M_contig103292.695.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103292 5..652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103292.695.1 ID=prot_M-pyrifera_M_contig103292.695.1|Name=mRNA_M-pyrifera_M_contig103292.695.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
GPLLPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVL
GNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSA
RIGIVDLLTRRFGKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKG
VSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVE
LAQPLSPRMQTLQRYI
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