prot_M-pyrifera_M_contig103269.686.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103269.686.1
Unique Nameprot_M-pyrifera_M_contig103269.686.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103269.686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 58..93
e-value: 7.8E-13
score: 58.6
coord: 94..127
e-value: 7.0E-6
score: 35.5
coord: 22..57
e-value: 2.9E-7
score: 40.1
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 59..93
e-value: 4.5E-12
score: 46.2
coord: 25..57
e-value: 8.5E-5
score: 23.1
coord: 94..127
e-value: 2.0E-8
score: 34.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..127
e-value: 4.0E-44
score: 153.6
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 16..126
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 17..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103269contigM-pyrifera_M_contig103269:227..607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103269.686.1mRNA_M-pyrifera_M_contig103269.686.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103269 227..607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103269.686.1 ID=prot_M-pyrifera_M_contig103269.686.1|Name=mRNA_M-pyrifera_M_contig103269.686.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
LAKQGNRQALCAVVSTANQGHVQVQYELGNMYFCGEGVTQDKATALTLFF
RAAVQGHVEAQTNLGYMYLFGLGVVKNYATAVKWLQQAAEQGDARAQTHL
GLMYVNGLGVEKNDATAVKWLQQAAEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf