prot_M-pyrifera_M_contig102912.615.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102912.615.1
Unique Nameprot_M-pyrifera_M_contig102912.615.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig102912.615.1 vs. uniprot
Match: A0A7S4IH20_9EUKA (Synaptosomal-associated protein 47 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IH20_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 5.980e-7
Identity = 39/125 (31.20%), Postives = 70/125 (56.00%), Query Frame = 0 
Query:    1 QKLDARNEYLRETFDVPDTEVVIQDYVCRLYRFDSHTDEDPSTKVSHSGRVYVTQNYVLFQSSINEQVKFHVPLCRV--ISCEHWARWLKSTKLVTEIGEVYYISLVRHGLSLYNLVHHLWCFEP 123
            +K+  + E +R  F+VP +E+VIQDY C L + ++          S+SGR+++TQNY+LF S  ++Q++  +   RV  I+ E     + S  +  + G++     V H    +NL++HL  ++P
Sbjct:   31 EKMQEKVELIRSVFNVPQSELVIQDYRCTLKKNNN----------SYSGRLFITQNYMLFLSK-DKQIRDTMAFYRVSGITRETTTLVIPSIGVELDTGKILLKGFV-HRDETFNLLNHLINYQP 143
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BLAST of mRNA_M-pyrifera_M_contig102912.615.1 vs. uniprot
Match: A0A7S4I9W5_9EUKA (Synaptosomal-associated protein 47 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I9W5_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 2.070e-6
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 0 
Query:    1 QKLDARNEYLRETFDVPDTEVVIQDYVCRLYRFDSHTDEDPSTKVSHSGRVYVTQNYVLFQSSINEQVKFHVPLCRVISCEHWARWLKSTKLVT---EIGEVYYISLVRHGLSLYNLVHHLWCFEP 123
            +K+  + E + + F+VP +E VIQDY C +      TDE     +   G++++TQNY+LF SS +  V   +   R++S       L     +T   + G+V +   + H    +NL+ HLW F+P
Sbjct:   30 EKMKTKTELVIQLFNVPTSERVIQDYRCSM-----KTDE-----LEGKGKLFITQNYLLFASS-DHNVLESIAFFRIMSVMKDKSLLFFPAGITIELDSGKVQFTGFM-HRDETFNLIRHLWTFQP 143
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102912.615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4IH20_9EUKA5.980e-731.20Synaptosomal-associated protein 47 n=1 Tax=Vannell... [more]
A0A7S4I9W5_9EUKA2.070e-630.95Synaptosomal-associated protein 47 n=1 Tax=Vannell... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 8..84
e-value: 4.4E-6
score: 36.2
IPR004182GRAM domainPFAMPF02893GRAMcoord: 11..81
e-value: 2.2E-7
score: 30.8
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 5..121
e-value: 5.2E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102912contigM-pyrifera_M_contig102912:3..377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102912.615.1mRNA_M-pyrifera_M_contig102912.615.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102912 3..377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102912.615.1 ID=prot_M-pyrifera_M_contig102912.615.1|Name=mRNA_M-pyrifera_M_contig102912.615.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
QKLDARNEYLRETFDVPDTEVVIQDYVCRLYRFDSHTDEDPSTKVSHSGR
VYVTQNYVLFQSSINEQVKFHVPLCRVISCEHWARWLKSTKLVTEIGEVY
YISLVRHGLSLYNLVHHLWCFEPFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
IPR011993PH-like_dom_sf