prot_M-pyrifera_M_contig102848.610.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102848.610.1
Unique Nameprot_M-pyrifera_M_contig102848.610.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
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BLAST of mRNA_M-pyrifera_M_contig102848.610.1 vs. uniprot
Match: A0A7S0J3B0_9EUKA (Alpha-galactosidase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J3B0_9EUKA)

HSP 1 Score: 50.1 bits (118), Expect = 3.790e-5
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 0 
Query:    4 QVWAGPLANGEFVVALLNAQNDGKNATITANFTIAGIP---TTTSFTATDAYSGEVEHGVMGGVSRTVAAHDVAALLLTP 80
            +VW GPLANG +V+AL+N      +  I+A F   G+P   T +SF   D ++ +      G +S  V AHD+A + L+P
Sbjct:  531 EVWGGPLANGAYVIALVNRFTQPLH--ISAPFAALGVPSIGTRSSFNVRDLWAHKSLGRATGKISAIVPAHDIALMRLSP 608
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102848.610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0J3B0_9EUKA3.790e-537.50Alpha-galactosidase n=1 Tax=Calcidiscus leptoporus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013780Glycosyl hydrolase, all-betaGENE3D2.60.40.1180coord: 1..81
e-value: 4.2E-15
score: 57.6
IPR041233Alpha galactosidase, C-terminal beta sandwich domainPFAMPF17801Melibiase_Ccoord: 2..78
e-value: 3.0E-16
score: 59.3
NoneNo IPR availableSUPERFAMILY51011Glycosyl hydrolase domaincoord: 2..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102848contigM-pyrifera_M_contig102848:140..385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102848.610.1mRNA_M-pyrifera_M_contig102848.610.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102848 140..385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102848.610.1 ID=prot_M-pyrifera_M_contig102848.610.1|Name=mRNA_M-pyrifera_M_contig102848.610.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
NALQVWAGPLANGEFVVALLNAQNDGKNATITANFTIAGIPTTTSFTATD
AYSGEVEHGVMGGVSRTVAAHDVAALLLTPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013780Glyco_hydro_b
IPR041233Melibiase_C