prot_M-pyrifera_M_contig102826.604.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102826.604.1
Unique Nameprot_M-pyrifera_M_contig102826.604.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length191
Homology
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: UPI0019903390 (Diaminopimelate epimerase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019903390)

HSP 1 Score: 172 bits (436), Expect = 8.120e-50
Identity = 101/177 (57.06%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 180
            FAKY GLGNDFLVVD R+  S      + D   VIA  LCDR++GVGGDGVL++    +  A A MRVLN+DGSEAEMCGNGLRCVAK L + G  +   + +DT AG L C +E  +G   +VTV+MG PRL   EIPM G T  E  IEQPL +    RA T VSMGNPHAIAFV
Sbjct:    3 FAKYHGLGNDFLVVDLRAV-SAAEAAAVQDPAHVIA--LCDRQFGVGGDGVLAVLPSAT--ADARMRVLNSDGSEAEMCGNGLRCVAKELYDRGGLRQPVITIDTGAGPLRCTIEADDGVARSVTVDMGLPRLARGEIPMTGPTG-ERCIEQPLDVVGAARAITCVSMGNPHAIAFV 173          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7Y6PZ68_9DELT (Diaminopimelate epimerase n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6PZ68_9DELT)

HSP 1 Score: 170 bits (431), Expect = 3.320e-49
Identity = 100/185 (54.05%), Postives = 119/185 (64.32%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALK 188
            FAKYQGLGNDFLVVD R      +       V    + LCDR++GVGGDGVL++  P   GA A MRVLNADGSEAEMCGNG+RCVAK L + G  +  S+ +DT AG L C ++ + G   +VTV MG PRL   EIPM G  S E  IEQPL +A      T VSMGNPHA+AFVT    +L+
Sbjct:    3 FAKYQGLGNDFLVVDLRELRGDDAAAAQDPEVV---KALCDRQFGVGGDGVLAVL-PGDPGADARMRVLNADGSEAEMCGNGIRCVAKELFDRGGVKKNSIAIDTGAGRLVCAIDDKGGVAQSVTVEMGAPRLLRGEIPMTGP-SHERCIEQPLQVAGVELVVTCVSMGNPHAVAFVTGDAGSLR 182          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7W0VNZ1_9DELT (Diaminopimelate epimerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0VNZ1_9DELT)

HSP 1 Score: 160 bits (405), Expect = 2.380e-45
Identity = 95/178 (53.37%), Postives = 116/178 (65.17%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAG-TRATTAVSMGNPHAIAFV 180
            FAKY GLGNDFLVVD R T +     K+ D   VIA  LCDR++GVGGDGVL++    ++G  A MRVLN+DGSEAEMCGNGLRCV ++L + G    + + +DT AG L CQL         +TV+MG PRL  AEIPM G    E  I+QP+ +    TR  T VSMGNPHA+ FV
Sbjct:    3 FAKYHGLGNDFLVVDLR-TANAADAAKVQDPATVIA--LCDRQFGVGGDGVLAVLPSIAKGDDARMRVLNSDGSEAEMCGNGLRCVVQWLHDHGGVAKDEMAIDTGAGRLVCQLLGER-----ITVSMGAPRLTRAEIPMVGPLG-ERCIDQPIEITGQPTRTITCVSMGNPHAVTFV 171          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7W0T0Z3_9DELT (Diaminopimelate epimerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0T0Z3_9DELT)

HSP 1 Score: 155 bits (391), Expect = 3.550e-43
Identity = 99/186 (53.23%), Postives = 118/186 (63.44%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGA----VAAVTVNMGRPRLRPAEIPMAG---ETSLESFIEQPLALAAGTRAT--TAVSMGNPHAIAFV 180
            FAKY GLGNDFLVVD R+  S      + D   V+A  LCDR++GVGGDGVL++    S+ A A MRVLN+DGSEAEMCGNGLRCVAK L + G  +   ++++T AG L C +E +EG       +VTV MG PRL   EIPM G   E  +E   E P     G  AT  TAVSMGNPHAI FV
Sbjct:    3 FAKYHGLGNDFLVVDLRAA-SVADANAVQDPASVMA--LCDRQFGVGGDGVLAVLP--SKTADARMRVLNSDGSEAEMCGNGLRCVAKELHDRGGLRQPEIVIETGAGNLACAIEAKEGVEDGFATSVTVRMGAPRLTRGEIPMTGPADERCIEQAFEVP-----GQPATAITAVSMGNPHAITFV 178          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A3M2E2N2_9DELT (Diaminopimelate epimerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M2E2N2_9DELT)

HSP 1 Score: 152 bits (383), Expect = 5.310e-42
Identity = 95/196 (48.47%), Postives = 112/196 (57.14%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRST-------PSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVL-VDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKALA 191
            F KY GLGNDF+VVD R+        P  P             R LCDRR+GVG DGVL +  P ++GA A MRVLNADGSEAEMCGNG+RCVAK L E       S L +DT AG L C ++   G V AV V+MGRPRL+  +IPM G  S E  +  P                  HA+AFV E+GPAL+ALA
Sbjct:    3 FFKYHGLGNDFVVVDLRAAQRGDGPWPEDPPA----------VRALCDRRFGVGADGVLPILPPQADGAHARMRVLNADGSEAEMCGNGIRCVAKHLYERDPALRTSPLRIDTGAGTLACAVDADGGTVTAVAVDMGRPRLQRGDIPMTGPAS-ERCVAAPXXXXXXXXXXXXXXXXXXHAVAFVPETGPALRALA 187          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: UPI001987D80A (Diaminopimelate epimerase n=1 Tax=Leptolyngbyaceae cyanobacterium LF-bin-369 TaxID=2804781 RepID=UPI001987D80A)

HSP 1 Score: 148 bits (373), Expect = 1.200e-40
Identity = 87/184 (47.28%), Postives = 110/184 (59.78%), Query Frame = 0
Query:    1 TIAFAKYQGLGNDFLVVDNRSTPS---TPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEA-GDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 180
            T++F KYQGLGNDF++VDNR  PS   TP    L          +CDR +G+G DGV+    P   G   TMR+ N+DGSE EMCGNG+RC+A+FLA+  G +   S  V TLAG +  ++E        +TV+MG+PRL PAEIP        + I Q L +A  T A T VSMGNPH I FV
Sbjct:    8 TLSFVKYQGLGNDFILVDNRHAPSPIVTPEQATL----------MCDRHFGIGADGVI-FALPGQNGTDYTMRIYNSDGSEPEMCGNGIRCMARFLADLEGKNAKSSYTVQTLAGLITPKIENN----GQITVDMGKPRLSPAEIPTTLTGGGNTVIAQSLEVAGKTWAVTCVSMGNPHCITFV 176          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7C3PGA9_9CYAN (Diaminopimelate epimerase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PGA9_9CYAN)

HSP 1 Score: 147 bits (371), Expect = 2.040e-40
Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = 0
Query:    2 IAFAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEA-GDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 180
            I F KY GLGNDF+++DNR+     S E  +     IA  LCDR +G+G DGV+    P   G    MR+ N+DGSE EMCGNG+RC+A+F+AE  G+++P +  +DTLAG +  +LE    A   VTV+MG PRL  AEIP     + E  I  PL +A  T   T VSMGNPH I FV
Sbjct:    3 IHFTKYHGLGNDFILIDNRA-----SAEPCLTTDQAIA--LCDRHFGIGADGVI-FAMPGQNGTDYAMRIYNSDGSEPEMCGNGIRCLARFIAELEGNNEPRAYTIDTLAGVITPRLE----ADGLVTVDMGEPRLLAAEIPTVLTAADEKVINAPLEVAGQTWQVTCVSMGNPHCITFV 170          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: K8EEI5_9FIRM (Diaminopimelate epimerase n=1 Tax=Desulforamulus hydrothermalis Lam5 = DSM 18033 TaxID=1121428 RepID=K8EEI5_9FIRM)

HSP 1 Score: 146 bits (368), Expect = 6.200e-40
Identity = 84/177 (47.46%), Postives = 112/177 (63.28%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 180
            F K  GLGNDF+++ N  T      E L D    +AR++CDRR+G+G DG++ L    SE A   M+++N+DGSEAEMCGN +RCVAK+L E G  + + + V+TLAG +  Q+    G V+AV V+MG PRL  A+IPM G       I +PL +A  T   TAVSMGNPH + FV
Sbjct:    3 FTKVHGLGNDFILI-NAGTG-----EGLPDDCSTLAREMCDRRFGIGADGLVLLLD--SEVADVRMKIINSDGSEAEMCGNAIRCVAKYLYEHGIVRKDEIKVETLAGIMVPQIIHNNGEVSAVRVDMGVPRLARADIPMLGPVG--QVINEPLEVAGQTFNVTAVSMGNPHCVIFV 169          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: D0LTS4_HALO1 (Diaminopimelate epimerase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LTS4_HALO1)

HSP 1 Score: 146 bits (369), Expect = 1.270e-39
Identity = 96/201 (47.76%), Postives = 121/201 (60.20%), Query Frame = 0
Query:    4 FAKYQGLGNDFLVVDNRS---TPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQP--ESVLVDTLAGALDCQLEWRE-----GAVAA---VTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKALA 191
            F KY GLGNDFLVVD R       T    ++     V  R LC+RR+G+G DG++++     +G  A +RVLN+DGSEAEMCGNGLRCV K+L E        E++ ++T AG L C+    +     G +AA   VTV+MGRPRL  A+IPM G    E  I +PLA+A      TAVSMGNPHAIAFV   G   +ALA
Sbjct:    3 FGKYHGLGNDFLVVDLRDPEVAAGTGHAGEVPSPAVV--RALCERRFGIGADGIMAVLPALGDGD-ARLRVLNSDGSEAEMCGNGLRCVVKYLGERDPALRGRETLNIETGAGLLRCRAHRSDTALGDGGIAAIEQVTVDMGRPRLERAQIPMHGPAE-ERCISEPLAIAGRPLDITAVSMGNPHAIAFVDVHGAEQRALA 199          
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A2T2S1Z3_9CYAN (Diaminopimelate epimerase n=1 Tax=Cyanobacteria bacterium QS_8_64_29 TaxID=1919134 RepID=A0A2T2S1Z3_9CYAN)

HSP 1 Score: 145 bits (365), Expect = 1.660e-39
Identity = 90/190 (47.37%), Postives = 116/190 (61.05%), Query Frame = 0
Query:    1 TIAFAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQ-PESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKA 189
            +IAFAKYQGLGNDF+V+DNR   S P      +G    A  LCDR +G+G DGV+    P ++G   +MR+ NADGSE EMCGNG+RC+A+FLAE+ + Q P    + TLAG +  QL     +   VTV+MG P+L  AE+P     + E  I QPLA+       TAV MGNPH I FV ++   L A
Sbjct:    2 SIAFAKYQGLGNDFVVIDNRHR-SEPVLG--ANG----AMQLCDRHFGIGADGVI-FALPGADGTDCSMRIFNADGSEPEMCGNGIRCLARFLAESTESQVPSRYRIGTLAGVMAPQLR----SDGQVTVDMGEPQLLAAEVPTTLCDANERVIAQPLAVDGEHWTVTAVGMGNPHCITFVEDADAILLA 179          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00199033908.120e-5057.06Diaminopimelate epimerase n=1 Tax=Myxococcales bac... [more]
A0A7Y6PZ68_9DELT3.320e-4954.05Diaminopimelate epimerase n=1 Tax=Kofleriaceae bac... [more]
A0A7W0VNZ1_9DELT2.380e-4553.37Diaminopimelate epimerase n=1 Tax=Deltaproteobacte... [more]
A0A7W0T0Z3_9DELT3.550e-4353.23Diaminopimelate epimerase n=1 Tax=Deltaproteobacte... [more]
A0A3M2E2N2_9DELT5.310e-4248.47Diaminopimelate epimerase n=1 Tax=Deltaproteobacte... [more]
UPI001987D80A1.200e-4047.28Diaminopimelate epimerase n=1 Tax=Leptolyngbyaceae... [more]
A0A7C3PGA9_9CYAN2.040e-4047.78Diaminopimelate epimerase n=1 Tax=Oscillatoriales ... [more]
K8EEI5_9FIRM6.200e-4047.46Diaminopimelate epimerase n=1 Tax=Desulforamulus h... [more]
D0LTS4_HALO11.270e-3947.76Diaminopimelate epimerase n=1 Tax=Haliangium ochra... [more]
A0A2T2S1Z3_9CYAN1.660e-3947.37Diaminopimelate epimerase n=1 Tax=Cyanobacteria ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001653Diaminopimelate epimerase, DapFTIGRFAMTIGR00652TIGR00652coord: 2..182
e-value: 2.6E-42
score: 143.1
IPR001653Diaminopimelate epimerase, DapFPFAMPF01678DAP_epimerasecoord: 4..135
e-value: 7.9E-28
score: 97.1
IPR001653Diaminopimelate epimerase, DapFPANTHERPTHR31689FAMILY NOT NAMEDcoord: 1..181
NoneNo IPR availableGENE3D3.10.310.10coord: 133..191
e-value: 1.7E-7
score: 33.1
NoneNo IPR availableGENE3D3.10.310.10coord: 1..132
e-value: 1.7E-37
score: 129.7
NoneNo IPR availablePANTHERPTHR31689:SF0DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 1..181
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 2..143
IPR018510Diaminopimelate epimerase, active sitePROSITEPS01326DAP_EPIMERASEcoord: 73..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102826contigM-pyrifera_M_contig102826:75..647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102826.604.1mRNA_M-pyrifera_M_contig102826.604.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102826 75..647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102826.604.1 ID=prot_M-pyrifera_M_contig102826.604.1|Name=mRNA_M-pyrifera_M_contig102826.604.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp
TIAFAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVG
GDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQ
PESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLE
SFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKALA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001653DAP_epimerase_DapF
IPR018510DAP_epimerase_AS