prot_M-pyrifera_M_contig102685.578.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102685.578.1
Unique Nameprot_M-pyrifera_M_contig102685.578.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length187
Homology
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: A0A1U7RR99_ALLSI (pre-mRNA-splicing factor CWC25 homolog n=9 Tax=Archosauria TaxID=8492 RepID=A0A1U7RR99_ALLSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.860e-7
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKLLS-LEK 81
            V+ EEYL G+ VD      T+E+D   +S  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E L S LEK
Sbjct:   81 VNREEYLMGRPVDKYVFEKTEEKDAGCSSETGLLPGSIFAPTGANSVLDIANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKELLQSSLEK 173          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: A0A8B9VBI3_9AVES (Uncharacterized protein n=1 Tax=Anas zonorhyncha TaxID=75864 RepID=A0A8B9VBI3_9AVES)

HSP 1 Score: 56.6 bits (135), Expect = 4.320e-7
Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIRE 74
            V+ EEYL G+ VD      T+++D   ++  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E
Sbjct:   29 VNREEYLMGRPVDKYVFEKTEDKDAGCSNETGLLPGSIFAKSGANSVLDMANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKE 113          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: A0A151P5E8_ALLMI (Pre-mRNA-splicing factor CWC25-like protein n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151P5E8_ALLMI)

HSP 1 Score: 59.3 bits (142), Expect = 5.110e-7
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKLLS-LEK 81
            V+ EEYL G+ VD      T+++D   +S  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E L S LEK
Sbjct:  231 VNREEYLMGRPVDKYVFEKTEDKDAGCSSETGLLPGSIFAPTGANSVLDIANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKELLQSSLEK 323          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: Q6DFK9_XENLA (CWC25 spliceosome-associated protein homolog S homeolog n=3 Tax=Xenopus laevis TaxID=8355 RepID=Q6DFK9_XENLA)

HSP 1 Score: 58.9 bits (141), Expect = 6.050e-7
Identity = 39/87 (44.83%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    1 VSSEEYLTGKAVDT------KEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKL 76
            V+ EEYL G+ VD       K+ +   +S  GL     F A  AN T +  NK+ EDPLF I+KRE E    +  NPVKMK IRE L
Sbjct:   81 VNREEYLLGRPVDKYILDKMKDPESGPSSETGLLPGSIFSAAGANSTLDMANKIREDPLFMIRKREDEKKREVLKNPVKMKKIREML 167          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: Q6DFD5_XENLA (AF549897-prov protein n=2 Tax=Xenopus laevis TaxID=8355 RepID=Q6DFD5_XENLA)

HSP 1 Score: 58.5 bits (140), Expect = 8.180e-7
Identity = 42/93 (45.16%), Postives = 50/93 (53.76%), Query Frame = 0
Query:    1 VSSEEYLTGKAVDT------KEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKLLS-LEK 81
            V+ EEYL G+ VD       KE +   +S  GL     F     N T +  NK+ EDPLF I+KRE E    +  NPVKMK IRE L S LEK
Sbjct:   81 VNREEYLLGRPVDKYILDKMKEPETGPSSDTGLLPGSIFSGAGGNSTLDLANKIREDPLFMIRKREDEKKREVLKNPVKMKKIREMLQSSLEK 173          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: UPI000522729B (pre-mRNA-splicing factor CWC25 homolog n=1 Tax=Opisthocomus hoazin TaxID=30419 RepID=UPI000522729B)

HSP 1 Score: 58.2 bits (139), Expect = 1.180e-6
Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKL 76
            V+ EEYL G+ VD      T+++D   +S  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E L
Sbjct:  115 VNREEYLMGRPVDKYVFEKTEDKDAGCSSETGLLPGSIFAKTGANSVLDMANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKELL 201          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: L8HCP8_ACACA (CCDC49 protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCP8_ACACA)

HSP 1 Score: 58.2 bits (139), Expect = 1.270e-6
Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    2 SSEEYLTGKAV-DTKEEDIA-------------AASTLGLFQ-ARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKLLSLEKGKGKHKK 88
            S +E+L G+A  D + E  A             A++ LGLF   +  +  QEAWN++ EDPL  I+++EKE+ + +  NP KM+ I+++LL +EK +   KK
Sbjct:   82 SGDEFLKGRAATDAQIEQAAKPEAQQAEPASAQASAGLGLFDNEKKVSAEQEAWNRIREDPLLEIKRKEKEAKEVVTKNPAKMQRIKDRLLGMEKERKMAKK 183          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: A0A093BLG3_CHAPE (Pre-mRNA-splicing factor CWC25 (Fragment) n=2 Tax=Chaetura pelagica TaxID=8897 RepID=A0A093BLG3_CHAPE)

HSP 1 Score: 57.4 bits (137), Expect = 1.880e-6
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKL 76
            V+ EEYL G+ VD       +E+D   +S  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E L
Sbjct:   18 VNREEYLMGRPVDKYIFEKAEEKDAGCSSETGLLPGSIFAKSGANSVLDMANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKELL 104          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: A0A8B9NSD7_9AVES (CWC25 spliceosome associated protein homolog n=2 Tax=Accipitrinae TaxID=8955 RepID=A0A8B9NSD7_9AVES)

HSP 1 Score: 57.4 bits (137), Expect = 1.980e-6
Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKL 76
            V+ EEYL G+ VD      T+++D   ++  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E L
Sbjct:   29 VNREEYLMGRPVDKYVFEKTEDKDAGCSNETGLLPGSIFAKTGANSVLDMANKIREDPLFMIRKREEEKKREVLNNPVKMKRIKELL 115          
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Match: A0A7K9I5T1_9AVES (CWC25 factor (Fragment) n=1 Tax=Bucco capensis TaxID=135168 RepID=A0A7K9I5T1_9AVES)

HSP 1 Score: 57.4 bits (137), Expect = 2.090e-6
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 VSSEEYLTGKAVD------TKEEDIAAASTLGL-----FQARAANPTQEAWNKVMEDPLFAIQKREKESLDSIKSNPVKMKHIREKL 76
            V+ EEYL G+ VD       +E+D   +S  GL     F    AN   +  NK+ EDPLF I+KRE+E    + +NPVKMK I+E L
Sbjct:   75 VNREEYLMGRPVDKYVFEKAEEKDAGCSSETGLLPGSIFAKSGANSVLDMANKIREDPLFMIRKREEEKKREVLNNPVKMKKIKELL 161          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102685.578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1U7RR99_ALLSI1.860e-745.16pre-mRNA-splicing factor CWC25 homolog n=9 Tax=Arc... [more]
A0A8B9VBI3_9AVES4.320e-741.18Uncharacterized protein n=1 Tax=Anas zonorhyncha T... [more]
A0A151P5E8_ALLMI5.110e-744.09Pre-mRNA-splicing factor CWC25-like protein n=1 Ta... [more]
Q6DFK9_XENLA6.050e-744.83CWC25 spliceosome-associated protein homolog S hom... [more]
Q6DFD5_XENLA8.180e-745.16AF549897-prov protein n=2 Tax=Xenopus laevis TaxID... [more]
UPI000522729B1.180e-642.53pre-mRNA-splicing factor CWC25 homolog n=1 Tax=Opi... [more]
L8HCP8_ACACA1.270e-636.27CCDC49 protein n=1 Tax=Acanthamoeba castellanii st... [more]
A0A093BLG3_CHAPE1.880e-642.53Pre-mRNA-splicing factor CWC25 (Fragment) n=2 Tax=... [more]
A0A8B9NSD7_9AVES1.980e-641.38CWC25 spliceosome associated protein homolog n=2 T... [more]
A0A7K9I5T1_9AVES2.090e-642.53CWC25 factor (Fragment) n=1 Tax=Bucco capensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..114
NoneNo IPR availablePANTHERPTHR16196CELL CYCLE CONTROL PROTEIN CWF25coord: 2..184
IPR022209Pre-mRNA splicing factorPFAMPF12542CWC25coord: 2..66
e-value: 1.4E-9
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102685contigM-pyrifera_M_contig102685:3..563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102685.578.1mRNA_M-pyrifera_M_contig102685.578.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102685 3..563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102685.578.1 ID=prot_M-pyrifera_M_contig102685.578.1|Name=mRNA_M-pyrifera_M_contig102685.578.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
VSSEEYLTGKAVDTKEEDIAAASTLGLFQARAANPTQEAWNKVMEDPLFA
IQKREKESLDSIKSNPVKMKHIREKLLSLEKGKGKHKKERKREKKEKRER
KERKRRERHREKDREPRGDSRDGRDRKRERDHDDRRRSRDEDLRNHSRRS
RSPEEKHRGERESRRGSKSPRRENKRESRSPRRESKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022209CWC25