prot_M-pyrifera_M_contig10238.507.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10238.507.1
Unique Nameprot_M-pyrifera_M_contig10238.507.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length99
Homology
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BLAST of mRNA_M-pyrifera_M_contig10238.507.1 vs. uniprot
Match: D7FMI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI5_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 3.460e-49
Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0 
Query:    1 MCEGVDSNLRRFFGLLYGHMGRALFIIFIAFLNFALTDAGWLGTFTALLLLLLGGVMVAVFLKYPHLLDETPGLGDLKT-APPRQGDYAPPPTMPSTNL 98
            MC+GVD  +RR+FGL+YGHMGRALFIIFIAFLNFALTDAGW  TFT LLLLL GG M+ VF KYPHLLDE PGLGDLKT APPRQ +YAPPPTMPST+L
Sbjct:  105 MCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLLLLHGGAMIVVFTKYPHLLDEAPGLGDLKTTAPPRQDEYAPPPTMPSTSL 203
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BLAST of mRNA_M-pyrifera_M_contig10238.507.1 vs. uniprot
Match: A0A4D9DAG1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAG1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.390e-8
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:    5 VDSNLRRFFGLLYGHMGRALFIIFIAFLNFALTDAGWLGTFTALLLLLLGGVMVAVFLKYPHL 67
            +D+  RR FG +YG  G+AL+IIFIAFLNF L   G L   T ++L + GG+M+    KYP L
Sbjct:  112 IDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGILQFATGIVLAVDGGLMLFATFKYPTL 174
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BLAST of mRNA_M-pyrifera_M_contig10238.507.1 vs. uniprot
Match: A0A7S3NGQ3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGQ3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.050e-8
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    8 NLRRFFGLLYGHMGRALFIIFIAFLNFALTDAGWLGTFTALLLLLLGGVMVAVFLKYPHLLDETPGL 74
            +L+R FG L+  +G+A+FIIF+AFLNF + +   LG  T +L L+ G ++V +FLKYPH    TP +
Sbjct:  114 HLKRNFGFLFHPLGKAIFIIFVAFLNFGVQEES-LGLATGILCLIDGALLVLLFLKYPHYHPLTPSI 179
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BLAST of mRNA_M-pyrifera_M_contig10238.507.1 vs. uniprot
Match: A0A7S2SJU5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJU5_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.320e-8
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:    3 EGVDSNLRRFFGLLYGHMGRALFIIFIAFLNFALTDAGWLGTFTALLLLLLGGVMVAVFLKYPHLLD 69
            E V+S LR+ FG L+  +G+  F++FIAFLNF LTD+G LG  T + L ++G   V ++L+ P   D
Sbjct:  106 ELVESILRKNFGFLFKPLGKGCFMVFIAFLNFGLTDSGELGLATGICLCIVGFGYVGLYLRNPEYFD 172
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10238.507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMI5_ECTSI3.460e-4980.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9DAG1_9STRA1.390e-849.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3NGQ3_9STRA2.050e-846.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2SJU5_9STRA3.320e-844.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10238contigM-pyrifera_M_contig10238:887..7352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10238.507.1mRNA_M-pyrifera_M_contig10238.507.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10238 876..8631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10238.507.1 ID=prot_M-pyrifera_M_contig10238.507.1|Name=mRNA_M-pyrifera_M_contig10238.507.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
MCEGVDSNLRRFFGLLYGHMGRALFIIFIAFLNFALTDAGWLGTFTALLL
LLLGGVMVAVFLKYPHLLDETPGLGDLKTAPPRQGDYAPPPTMPSTNL*
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