prot_M-pyrifera_M_contig101583.329.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101583.329.1
Unique Nameprot_M-pyrifera_M_contig101583.329.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length72
Homology
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A7V8V2M6_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V2M6_9BACT)

HSP 1 Score: 147 bits (371), Expect = 1.200e-43
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDPRV 72
            MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDPRV
Sbjct:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDPRV 72          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A7C4UKF7_9BACT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4UKF7_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 5.010e-11
Identity = 37/73 (50.68%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAE---TSDLTEALTRLEQQPPPAIVDP 70
            M   L +S TF + +FHGR  GG  EWPP PLRLFQ L+A +   +     T D T+AL  LEQQ  PAIV P
Sbjct:    1 MPAYLCLSVTFHDERFHGRRDGGQPEWPPSPLRLFQALVAAAEAAVRAGGLTDDPTDALRWLEQQGSPAIVAP 73          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A2T6DGL1_9BACT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Verrucomicrobia bacterium LW23 TaxID=2161867 RepID=A0A2T6DGL1_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 3.300e-10
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 0
Query:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTE---ALTRLEQQPPPAIVDPRV 72
            M   L I+  FL   +HGRA GG+ EWPP PLRLFQ L+A +A    E   L     AL  LE Q PP IV P +
Sbjct:    1 MTKYLSIAVRFLQGMYHGRADGGEPEWPPSPLRLFQALVAAAAARANERELLQSGAPALLWLEDQAPPLIVAPAI 75          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A3A4JXW0_9DELT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3A4JXW0_9DELT)

HSP 1 Score: 59.3 bits (142), Expect = 1.400e-8
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 0
Query:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLTEALTRLEQQPPPAIVDP 70
            M    Y++  FLNP FHGR  GG+ EWPP P+R+FQ L+A  A    + +     L  LE   PP I+ P
Sbjct:    1 MPSHFYLTIRFLNPAFHGRKDGGEPEWPPSPMRMFQALVA--AAHRTDATLFVSVLEWLENLYPPIILAP 68          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: D5STD6_PLAL2 (CRISPR-associated protein, GSU0054 family n=1 Tax=Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / Mu 290) TaxID=521674 RepID=D5STD6_PLAL2)

HSP 1 Score: 57.8 bits (138), Expect = 4.890e-8
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    5 LYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLT---EALTRLEQQPPPAIV 68
            L ++     P FHG+  GG+ EWPP PLRL+Q L+A +A +  +   +    +AL  LE+QP PAI+
Sbjct:    4 LCLTVRLHQPLFHGQRDGGEPEWPPSPLRLYQSLVAAAAAQTPDGDPMAVAGDALQWLERQPAPAII 70          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A8E6B2R3_9BACT (Type I-U CRISPR-associated protein Cas5/Cas6 n=1 Tax=Telmatocola sphagniphila TaxID=1123043 RepID=A0A8E6B2R3_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 6.660e-8
Identity = 33/71 (46.48%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETSDLT---EALTRLEQQPPPAIV 68
            M   L ++  +L P  HGR AGG+ EWPP PLRLFQ L+A +A    E   L     AL  LE +P P IV
Sbjct:    1 MKTQLCVTIRYLQPLSHGRGAGGEPEWPPTPLRLFQALVAAAAARWNERMVLAYAVPALRWLEGRPFPIIV 71          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A225D8L2_9BACT (CRISPR-associated protein Csb2 n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225D8L2_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 5.970e-7
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 MADALYISATFLNPQ--FHGRAAGGDAEWPPLPLRLFQDLIAGSA 43
            M+D L  +  FL+P+  FHG+  GG+AEWPP PLRLFQ LI  +A
Sbjct:    1 MSDVLNFTVRFLDPEPSFHGKRDGGEAEWPPSPLRLFQALIDAAA 45          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A6P2D2E0_9BACT (Uncharacterized protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2D2E0_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 8.180e-7
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    7 ISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSA-----DEIAETSDLTEALTRLEQQPPPAIV 68
            I+  FL P  HGR  GG+ EWPP PLR+FQ L+A SA      ++AE +    AL  L +QP P +V
Sbjct:    7 ITIRFLQPFSHGRGDGGEPEWPPSPLRVFQALVAASAAYWRDHQLAEYAG--PALEWLAKQPAPVLV 71          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: A0A142XGY4_9BACT (CRISPR-associated protein n=1 Tax=Gemmata sp. SH-PL17 TaxID=1630693 RepID=A0A142XGY4_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 1.530e-6
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    1 MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETS 50
            M + L ++  F +P F GR  GG+ EWPP PLR+FQ L+A SA    + S
Sbjct:    1 MPNYLCVTIRFADPTFRGRGDGGEPEWPPSPLRVFQALVAASAARFGDPS 50          
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Match: UPI001C84A6B6 (type I-U CRISPR-associated protein Csb2 n=1 Tax=Desulfuromonas versatilis TaxID=2802975 RepID=UPI001C84A6B6)

HSP 1 Score: 52.0 bits (123), Expect = 5.350e-6
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    5 LYISAT--FLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSA--DEIAETSDLTEALTRLEQQPPPAIVDP 70
            +Y + T  FL+ +FHGR  GG+ EWPP PLR+FQ L+A +A  +  A +   + AL  L+ Q  P I+ P
Sbjct:    3 MYFALTIDFLDCRFHGRRDGGEPEWPPSPLRVFQALVAAAARMNGGALSDGDSAALQWLQAQTAPVIIAP 72          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101583.329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A7V8V2M6_9BACT1.200e-43100.00Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
A0A7C4UKF7_9BACT5.010e-1150.68Type I-U CRISPR-associated protein Cas5/Cas6 n=1 T... [more]
A0A2T6DGL1_9BACT3.300e-1048.00Type I-U CRISPR-associated protein Cas5/Cas6 n=1 T... [more]
A0A3A4JXW0_9DELT1.400e-842.86Type I-U CRISPR-associated protein Cas5/Cas6 n=1 T... [more]
D5STD6_PLAL24.890e-841.79CRISPR-associated protein, GSU0054 family n=1 Tax=... [more]
A0A8E6B2R3_9BACT6.660e-846.48Type I-U CRISPR-associated protein Cas5/Cas6 n=1 T... [more]
A0A225D8L2_9BACT5.970e-755.56CRISPR-associated protein Csb2 n=1 Tax=Fimbriiglob... [more]
A0A6P2D2E0_9BACT8.180e-746.27Uncharacterized protein n=1 Tax=Gemmata massiliana... [more]
A0A142XGY4_9BACT1.530e-646.00CRISPR-associated protein n=1 Tax=Gemmata sp. SH-P... [more]
UPI001C84A6B65.350e-642.86type I-U CRISPR-associated protein Csb2 n=1 Tax=De... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019089CRISPR-associated protein, GSU0054TIGRFAMTIGR02165TIGR02165coord: 4..70
e-value: 5.9E-17
score: 59.9
IPR019089CRISPR-associated protein, GSU0054PFAMPF09609Cas_GSU0054coord: 8..70
e-value: 8.8E-12
score: 44.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101583contigM-pyrifera_M_contig101583:452..667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101583.329.1mRNA_M-pyrifera_M_contig101583.329.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101583 452..667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101583.329.1 ID=prot_M-pyrifera_M_contig101583.329.1|Name=mRNA_M-pyrifera_M_contig101583.329.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp
MADALYISATFLNPQFHGRAAGGDAEWPPLPLRLFQDLIAGSADEIAETS
DLTEALTRLEQQPPPAIVDPRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019089Cas_GSU0054