prot_M-pyrifera_M_contig101557.321.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101557.321.1
Unique Nameprot_M-pyrifera_M_contig101557.321.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A429H8L9_ACIBA (Protein ninH n=3 Tax=Acinetobacter TaxID=469 RepID=A0A429H8L9_ACIBA)

HSP 1 Score: 62.8 bits (151), Expect = 7.080e-12
Identity = 27/45 (60.00%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            ++ L+E+PLL  T+THTRGNQ +A++LLG++RGTLR+KLK HG++
Sbjct:   32 VMELVEKPLLDLTLTHTRGNQTKAAELLGLNRGTLRKKLKAHGLM 76          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A3Q8UIP8_ACIBA (Protein ninH n=2 Tax=Acinetobacter TaxID=469 RepID=A0A3Q8UIP8_ACIBA)

HSP 1 Score: 62.4 bits (150), Expect = 1.080e-11
Identity = 27/44 (61.36%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    2 LTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            + L+E+PLL  T+THTRGNQ +A+++LG++RGTLR KLK HGM+
Sbjct:   33 MQLVEKPLLEITLTHTRGNQTKAAEILGLNRGTLRTKLKAHGMI 76          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: D0CFR6_ACIB2 (DNA-binding protein n=18 Tax=Moraxellaceae TaxID=468 RepID=D0CFR6_ACIB2)

HSP 1 Score: 58.9 bits (141), Expect = 2.360e-10
Identity = 26/45 (57.78%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            ++ L+E+PLLA T+  TRGNQ +A++LLG++RGTLRQ+LK H +L
Sbjct:   27 VMALLEKPLLAETLIKTRGNQTKAAELLGLNRGTLRQRLKAHNIL 71          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A2H0D8R2_9GAMM (Putative Fis-like DNA-binding protein n=1 Tax=Gammaproteobacteria bacterium CG22_combo_CG10-13_8_21_14_all_40_8 TaxID=1974025 RepID=A0A2H0D8R2_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 1.950e-9
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGM 44
            +L  IE PL+   M HT GNQ QASKLLG++RGTLR+KLK +G+
Sbjct:   48 VLAEIEAPLMEAVMKHTNGNQTQASKLLGLNRGTLRKKLKTYGL 91          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A839V1W0_9GAMM (Putative Fis-like DNA-binding protein n=2 Tax=Halomonas cerina TaxID=447424 RepID=A0A839V1W0_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 3.070e-9
Identity = 24/41 (58.54%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    5 IEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            +E PLLA  + HTRGNQ +A+++LG++RGTLR+KLK HG++
Sbjct:   72 VEAPLLASVLEHTRGNQTRAAEILGLNRGTLRKKLKHHGLI 112          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A345P6T2_9GAMM (Putative Fis-like DNA-binding protein n=2 Tax=Bacteria TaxID=2 RepID=A0A345P6T2_9GAMM)

HSP 1 Score: 55.8 bits (133), Expect = 5.170e-9
Identity = 25/45 (55.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            +L  IE+PLL+  +  TRGNQ +AS++LG++RGTLR+KLK HG++
Sbjct:   43 VLAEIEKPLLSVVLEQTRGNQTRASEILGLNRGTLRKKLKAHGLM 87          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: UPI00166038DE (protein ninH n=1 Tax=Acinetobacter baumannii TaxID=470 RepID=UPI00166038DE)

HSP 1 Score: 55.1 bits (131), Expect = 7.300e-9
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIH 42
            ++ L+E+PLL  T+  TRGNQ +A++LLG++RGTLRQ+LK H
Sbjct:   27 VMALLEKPLLEETLIKTRGNQTKAAELLGLNRGTLRQRLKAH 68          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A172YKD3_9GAMM (Putative Fis-like DNA-binding protein n=3 Tax=Halotalea alkalilenta TaxID=376489 RepID=A0A172YKD3_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 1.120e-8
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            +L+ +E PLLA  M H   NQ  AS+LLG++RGTLR+KLK HG+L
Sbjct:   48 VLSEVEAPLLASVMAHVNDNQTAASQLLGLNRGTLRKKLKQHGLL 92          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A1H7KLM7_9GAMM (Putative Fis-like DNA-binding protein n=1 Tax=Halomonas daqiaonensis TaxID=650850 RepID=A0A1H7KLM7_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 1.280e-8
Identity = 23/41 (56.10%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    5 IEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            +E PLLA  + HT+GNQ +A+++LG++RGTLR+KLK HG++
Sbjct:   74 VEAPLLASVLDHTQGNQTRAAEMLGLNRGTLRKKLKQHGLI 114          
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Match: A0A5K1I7Y3_9GAMM (Putative Fis-like DNA-binding protein n=1 Tax=Halomonas lysinitropha TaxID=2607506 RepID=A0A5K1I7Y3_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 1.280e-8
Identity = 23/41 (56.10%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    5 IEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML 45
            +E PLLA  + HT+GNQ +A+++LG++RGTLR+KLK HG++
Sbjct:   74 VEAPLLASVLDHTQGNQTRAAEMLGLNRGTLRKKLKHHGLI 114          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101557.321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A429H8L9_ACIBA7.080e-1260.00Protein ninH n=3 Tax=Acinetobacter TaxID=469 RepID... [more]
A0A3Q8UIP8_ACIBA1.080e-1161.36Protein ninH n=2 Tax=Acinetobacter TaxID=469 RepID... [more]
D0CFR6_ACIB22.360e-1057.78DNA-binding protein n=18 Tax=Moraxellaceae TaxID=4... [more]
A0A2H0D8R2_9GAMM1.950e-961.36Putative Fis-like DNA-binding protein n=1 Tax=Gamm... [more]
A0A839V1W0_9GAMM3.070e-958.54Putative Fis-like DNA-binding protein n=2 Tax=Halo... [more]
A0A345P6T2_9GAMM5.170e-955.56Putative Fis-like DNA-binding protein n=2 Tax=Bact... [more]
UPI00166038DE7.300e-957.14protein ninH n=1 Tax=Acinetobacter baumannii TaxID... [more]
A0A172YKD3_9GAMM1.120e-857.78Putative Fis-like DNA-binding protein n=3 Tax=Halo... [more]
A0A1H7KLM7_9GAMM1.280e-856.10Putative Fis-like DNA-binding protein n=1 Tax=Halo... [more]
A0A5K1I7Y3_9GAMM1.280e-856.10Putative Fis-like DNA-binding protein n=1 Tax=Halo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002197DNA binding HTH domain, Fis-typePRINTSPR01590HTHFIScoord: 25..45
score: 34.99
coord: 8..25
score: 24.96
IPR002197DNA binding HTH domain, Fis-typePFAMPF02954HTH_8coord: 4..40
e-value: 7.0E-13
score: 48.1
NoneNo IPR availableGENE3D1.10.10.60coord: 1..44
e-value: 1.8E-13
score: 52.8
NoneNo IPR availablePANTHERPTHR47918FAMILY NOT NAMEDcoord: 2..44
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101557contigM-pyrifera_M_contig101557:48..185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101557.321.1mRNA_M-pyrifera_M_contig101557.321.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101557 30..185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101557.321.1 ID=prot_M-pyrifera_M_contig101557.321.1|Name=mRNA_M-pyrifera_M_contig101557.321.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
MLTLIEQPLLAHTMTHTRGNQVQASKLLGMSRGTLRQKLKIHGML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002197HTH_Fis
IPR009057Homeobox-like_sf