prot_M-pyrifera_M_contig101551.319.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101551.319.1
Unique Nameprot_M-pyrifera_M_contig101551.319.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A151ZH86_9MYCE (ATP-dependent DNA helicase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZH86_9MYCE)

HSP 1 Score: 115 bits (287), Expect = 2.280e-27
Identity = 55/120 (45.83%), Postives = 86/120 (71.67%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPS-QEAEDSVMEEAGTDEVDDLFDMVE 119
            M+ RI QLV+DS++DQ Y+KA++C+K LR GC++E E+DA+N++L+++R  +E K++D FWQL+++  +TLI+EEE + S +T  E+ +FL   S Q+          TD VDDLFD +E
Sbjct:  622 MRSRIQQLVSDSLKDQYYQKAIECIKELRVGCIKESESDAFNSFLKEIRQLYESKKKDDFWQLIMSNSITLINEEESDSSDITVEESIQFLDKKSKQQPISQPTTNQDTDSVDDLFDQIE 741          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A8J4PTU9_9MYCE (Ku domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTU9_9MYCE)

HSP 1 Score: 107 bits (268), Expect = 8.380e-25
Identity = 54/120 (45.00%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQ-EAEDSVMEEAGTDEVDDLFDMVE 119
            M+ERI QLV DS++DQ Y+KA+DC+K LR GC++E E D +N ++++L++S + K+RD FWQ++V   + LI  EE + S +T  EA  FL   S  ++    +  A TD +DDLFD +E
Sbjct:  629 MKERILQLVNDSLKDQYYQKALDCVKELRLGCIKESEPDQFNTFIKELKSSFQSKKRDDFWQVLVEYNVNLISMEESDSSEITADEANSFLERKSSTQSIAQPVANANTDSIDDLFDQIE 748          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: F1A270_DICPU (VWFA domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A270_DICPU)

HSP 1 Score: 107 bits (267), Expect = 1.150e-24
Identity = 52/123 (42.28%), Postives = 81/123 (65.85%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAA---GLTLIHEEECEDSPVTKAEAEEFLTAPSQEAED-SVMEEAGTDEVDDLFDMVE 119
            M+ERI QLV DS+++Q Y+KA +C+K LR GC+RE EAD++N++++ +R+ +E K++D FW+ +       + LI E+EC+ S ++K EA EFL       +   +     TD VDDLFD +E
Sbjct:  647 MKERIIQLVNDSLKEQYYQKAFECIKELRNGCIRESEADSFNSFIKDIRSLYENKKKDDFWKYITTNQPYAINLISEDECDSSSISKDEANEFLNRKQSNTQTPQINTNTNTDSVDDLFDQIE 769          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: XRCC5_DICDI (X-ray repair cross-complementing protein 5 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=XRCC5_DICDI)

HSP 1 Score: 107 bits (267), Expect = 1.150e-24
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVA--------AGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 119
            M+ERI QLV DS+RDQ Y+KA +C+K LR GC+RE EA+ +N +L+ +R+  + K+RD FWQ + A          + LI ++EC+ S VT+ E ++FL    ++     +    TD VDDLFD +E
Sbjct:  670 MKERILQLVNDSLRDQYYQKAFECIKELRVGCIRESEAEQFNGFLKDMRSLFQSKKRDDFWQYITADVTSILGEKSINLITQDECDSSEVTQEELDQFLDKKVKQFNPPPITNVNTDSVDDLFDQIE 796          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: UPI000644DEE0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DEE0)

HSP 1 Score: 103 bits (258), Expect = 1.870e-23
Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 119
            M++RI QLV DS++DQ Y+KA+DC+  LR GC++E E++ +N +L +LR  +EGKRRD FWQL+    +TLI   E +DS +++++A  FL +    A   V+    +D VDDLFD +E
Sbjct:  636 MKQRIVQLVNDSLKDQFYQKALDCVVELRKGCIKESESEEFNTFLGELRDYYEGKRRDDFWQLLRVQSITLISTAESDDSGISESDALAFLGSKPTAAA-PVLSTPKSDSVDDLFDQIE 753          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: D3BLJ3_POLPP (ATP-dependent DNA helicase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BLJ3_POLPP)

HSP 1 Score: 103 bits (256), Expect = 3.450e-23
Identity = 52/119 (43.70%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 119
            M++RI QLV DS++DQ Y+KA++C+ ALR G ++E E+  +N +LR+LR  +E K+RD FWQL+V   + LI  +E +DS +T+ E++EFL +  +    +  + + +D VDDLFD +E
Sbjct:  581 MKQRIVQLVNDSLKDQFYQKALECVVALRRGSIKESESLVFNQFLRELRDYYESKKRDDFWQLIVTNQIGLITNDESDDSEITEKESKEFLGSKRKTIAINNNQPSKSDSVDDLFDQIE 699          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: F4PIU8_CAVFA (ATP-dependent DNA helicase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIU8_CAVFA)

HSP 1 Score: 102 bits (254), Expect = 6.500e-23
Identity = 53/120 (44.17%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAED-SVMEEAGTDEVDDLFDMVE 119
            M+ RI QLV DS++DQ Y+KA++C+ ALR GC++E E+DA+N +L++LR   E K+RD FWQL+V   +TLI+++E + S V++ E+++FL    +  +          D VDDLFD +E
Sbjct:  637 MRSRIVQLVNDSLKDQFYQKALECVVALRQGCIKESESDAFNTFLQELRDYFESKKRDDFWQLLVTWKITLINDQESDTSSVSEEESKKFLGVKPKPVQPLQAPSNNKGDTVDDLFDQIE 756          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: D2VUC7_NAEGR (Ku70/Ku80 beta-barrel domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VUC7_NAEGR)

HSP 1 Score: 89.4 bits (220), Expect = 2.510e-18
Identity = 53/123 (43.09%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFW-QLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEV---DDLFDMVE 119
            MQ  I +LV DSI DQ YEK + C+K LR GC+RE E + +N +L+KL+ S+   +R+ FW   +V   ++LI ++EC++S VT+ EA++FLT     A   V++E   DE    +DLFD +E
Sbjct:  654 MQVVIFKLVNDSIEDQYYEKVLACIKTLREGCIREAEPNQFNNFLKKLKQSYSKGKREDFWCSFIVQNNISLITQDECDESEVTEDEAKKFLTEAVIAA---VIQEESEDEKIGDNDLFDQLE 773          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A6A5C455_NAEFO (VWFA domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C455_NAEFO)

HSP 1 Score: 84.0 bits (206), Expect = 1.940e-16
Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQ-LVVAAGLTLIHEEECEDSPVTKAEAEEFLT-----APSQE-AEDSVMEEAGTDEVDDLFDMVE 119
            MQ  I +L+ DSI DQ YEK + C++ LR GC+RE E + +N +++ L+  +   +R+ FW+  +V   ++LI ++EC++S VT+ EA+ FLT     AP QE  ED  M +      +DLFD +E
Sbjct:  659 MQNVIFKLINDSIEDQYYEKVLSCVRVLREGCIRESEPELFNHFMKILKQQYSKGKREEFWKNYIVGNKISLITQDECDESEVTEEEAKNFLTQAVLAAPVQEEVEDEKMGD------NDLFDELE 778          
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Match: A0A1Y1I9N6_KLENI (ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9N6_KLENI)

HSP 1 Score: 82.4 bits (202), Expect = 6.680e-16
Identity = 43/119 (36.13%), Postives = 75/119 (63.03%), Query Frame = 0
Query:    1 MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRASHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAEDSVMEEAGTDEVDDLFDMVE 119
            M++ I  LV  + +   Y++A++CL+ALR GC+ + E   +N+YLR++ A  +GKR+  FW+ +V   LTLI+ +E  DS V   EA++FLT    +   +V E    +EVD++ ++++
Sbjct:  601 MKDVIDNLVTQAYQGNTYDQALECLRALRRGCILQSEPLEFNSYLREIAARSKGKRQHDFWERLVKNQLTLINRDEEPDSDVLPEEAQKFLTEAEAKPPSAVEEPEKDEEVDEMAELLD 719          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101551.319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151ZH86_9MYCE2.280e-2745.83ATP-dependent DNA helicase n=1 Tax=Tieghemostelium... [more]
A0A8J4PTU9_9MYCE8.380e-2545.00Ku domain-containing protein n=1 Tax=Polysphondyli... [more]
F1A270_DICPU1.150e-2442.28VWFA domain-containing protein n=1 Tax=Dictyosteli... [more]
XRCC5_DICDI1.150e-2442.52X-ray repair cross-complementing protein 5 n=1 Tax... [more]
UPI000644DEE01.870e-2345.38hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BLJ3_POLPP3.450e-2343.70ATP-dependent DNA helicase n=1 Tax=Polysphondylium... [more]
F4PIU8_CAVFA6.500e-2344.17ATP-dependent DNA helicase n=1 Tax=Cavenderia fasc... [more]
D2VUC7_NAEGR2.510e-1843.09Ku70/Ku80 beta-barrel domain-containing protein n=... [more]
A0A6A5C455_NAEFO1.940e-1639.68VWFA domain-containing protein n=2 Tax=Naegleria T... [more]
A0A1Y1I9N6_KLENI6.680e-1636.13ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036494Ku, C-terminal domain superfamilyGENE3D1.25.40.240coord: 1..94
e-value: 5.1E-31
score: 109.2
IPR036494Ku, C-terminal domain superfamilySUPERFAMILY101420C-terminal domain of Ku80coord: 1..92
IPR014893Ku, C-terminalPFAMPF08785Ku_PK_bindcoord: 1..91
e-value: 3.0E-30
score: 104.8
NoneNo IPR availablePANTHERPTHR12604KU AUTOANTIGEN DNA HELICASEcoord: 1..91
NoneNo IPR availablePANTHERPTHR12604:SF4X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5coord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101551contigM-pyrifera_M_contig101551:25..384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101551.319.1mRNA_M-pyrifera_M_contig101551.319.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101551 1..384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101551.319.1 ID=prot_M-pyrifera_M_contig101551.319.1|Name=mRNA_M-pyrifera_M_contig101551.319.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MQERISQLVADSIRDQLYEKAVDCLKALRTGCVREEEADAYNAYLRKLRA
SHEGKRRDAFWQLVVAAGLTLIHEEECEDSPVTKAEAEEFLTAPSQEAED
SVMEEAGTDEVDDLFDMVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036494Ku_C_sf
IPR014893Ku_PK_bind