prot_M-pyrifera_M_contig101431.299.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101431.299.1
Unique Nameprot_M-pyrifera_M_contig101431.299.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length207
Homology
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: UPI001E38DB48 (tRNA pseudouridine(38-40) synthase TruA n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E38DB48)

HSP 1 Score: 256 bits (654), Expect = 8.410e-83
Identity = 127/205 (61.95%), Postives = 145/205 (70.73%), Query Frame = 0
Query:    1 MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDYP 205
            ++GRTD GVHA GQV+S DV +   D   + R +N    PE+  R A IV DDF ARFSA  R YR+ VLN P P PFL+ T WWV +PLDL ++RL CDPLIG HDFSSFCRRPK G GPEV+LVRRV  A W DLGDGVLRF+I   AFCHQMVRSIVG  V VGRGRR AG++ G+  A DR    + APPHGL LW V YP
Sbjct:   67 VAGRTDKGVHAHGQVVSLDVADPLVDLGALARAVNGICGPEISVRAATIVADDFDARFSATWRAYRYTVLNRPDPDPFLARTAWWVPEPLDLNALRLGCDPLIGSHDFSSFCRRPK-GAGPEVTLVRRVLDARWHDLGDGVLRFDIRANAFCHQMVRSIVGLLVDVGRGRRRAGQVAGIRRAGDRAGVPTVAPPHGLCLWEVGYP 270          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: UPI001AA06E5F (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA06E5F)

HSP 1 Score: 250 bits (638), Expect = 1.910e-80
Identity = 125/210 (59.52%), Postives = 144/210 (68.57%), Query Frame = 0
Query:    2 SGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKS------GDG-PEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 204
            +GRTD GVHAWGQV+SFD P A  D   + R IN      +V R+A + P DF ARFSA  R YR+ ++N P+P PFL+ T WWV  PLD+A+MRL CDPLIGEHDFSSFCRRPK        DG P  SLVRRV  A W D GDGVLRF I+ TAFCHQMVRSIVG  V VG GR+ AGE+ G+L  RDR+ +   APP GL LW V Y
Sbjct:   70 AGRTDRGVHAWGQVVSFDAPAAGLDLGALQRSINKLCGGTIVVREAAVAPPDFDARFSARSRTYRYTIVNRPVPDPFLAATSWWVDQPLDVAAMRLGCDPLIGEHDFSSFCRRPKDRMIGTEDDGDPGPSLVRRVIDARWDDEGDGVLRFTIEATAFCHQMVRSIVGTLVDVGLGRKRAGEVAGILRGRDRSLAGPVAPPQGLCLWRVTY 279          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A5Q2RGF6_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RGF6_9ACTN)

HSP 1 Score: 249 bits (637), Expect = 2.890e-80
Identity = 119/203 (58.62%), Postives = 144/203 (70.94%), Query Frame = 0
Query:    1 MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVD 203
            ++GRTD GVHA G V+SFD P    DP+ +   +N  +QP V  R A + PD F ARFSA  R YR+ VLN  +P P L++  W+V  PLDLA+MRLACDPLIGEHDF+SFCR+PK  DG +  +VRRV  A W DLGDG+LRFEI   AFCHQMVRSIVG  V VG GRR AG++ GV+ ARDR+A+   APP GL LW V+
Sbjct:   72 VAGRTDKGVHAHGNVVSFDAPAEGLDPQALRDALNKMLQPHVAVRHAAVAPDGFDARFSATARTYRYTVLNRDVPDPLLADRSWFVDAPLDLAAMRLACDPLIGEHDFTSFCRKPKRTDGADPVMVRRVRSARWDDLGDGLLRFEIRANAFCHQMVRSIVGLLVEVGLGRRHAGDVLGVIRARDRHAAGRLAPPQGLVLWHVE 274          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A6I3F3W4_9ACTN (tRNA pseudouridine synthase A n=2 Tax=root TaxID=1 RepID=A0A6I3F3W4_9ACTN)

HSP 1 Score: 248 bits (633), Expect = 8.760e-80
Identity = 115/204 (56.37%), Postives = 146/204 (71.57%), Query Frame = 0
Query:    1 MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 204
            ++GRTDAGVHAWGQV+SFD+   +ADP  + RV+N+   P +V R+  I  DDF ARFSA  R YR+ V+N P+P PFL+ T WWV  P+D+ ++ L CDPLIG HDFSSFCR+PK+    E S++RRV  A W +LGDG+LRF+I+  AFCHQMVRSIVG  V +GRGR   GE+  +LAARDR+ S   AP  GL LW V +
Sbjct:   47 IAGRTDAGVHAWGQVVSFDIRADRADPVALARVVNMACVPAIVVRECEIAADDFDARFSARSRSYRYTVINRPLPDPFLAPTTWWVPQPIDVKALHLGCDPLIGGHDFSSFCRKPKTD--LEFSMIRRVRDARWHELGDGILRFDIEANAFCHQMVRSIVGTLVDMGRGRLRPGEMATILAARDRSLSGVVAPAQGLCLWEVGF 248          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A7Y2N713_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N713_9ACTN)

HSP 1 Score: 246 bits (627), Expect = 3.990e-79
Identity = 127/209 (60.77%), Postives = 146/209 (69.86%), Query Frame = 0
Query:    1 MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPK-SGDGPEVSLVRRVTRAHWS----DLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 204
            MSGRTDAGVHA  QVLSFD  +   D  R+ + IN  + PEV+     + P  F ARFSAIGRRYR+ VLN P PSPF +   WWV  PLDL +M+ AC P++GEHDF+SFCRRPK + DG  +SLVRRV  A WS    D G   LRFEI G AFCHQMVRSI G HVAVG+GRRS  ++  VLAARDRNA+ SPAPP GL LW V Y
Sbjct:   47 MSGRTDAGVHARHQVLSFDT-DTTIDATRLAKSINSRLGPEVIATSVDVAPGSFHARFSAIGRRYRYTVLNHPHPSPFSAGFEWWVPGPLDLEAMQAACAPVVGEHDFASFCRRPKPNDDGQLISLVRRVDSAAWSEDTDDSGQRRLRFEIAGAAFCHQMVRSITGLHVAVGQGRRSPADVADVLAARDRNAAPSPAPPQGLMLWDVMY 254          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A6N7FQ44_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FQ44_9ACTN)

HSP 1 Score: 242 bits (617), Expect = 2.740e-77
Identity = 117/205 (57.07%), Postives = 143/205 (69.76%), Query Frame = 0
Query:    1 MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDG-PEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 204
            ++GRTDAGVHAWGQV+SFD  EA  D   + + +N  + P +  R   +   DF ARFSA  RRYR+ VLN  +P PFL+ T W V   LDLA++RL CD L GE DF+SFCRRP+ G G P  SLVRRV  A W ++ +GVLRFEI+ +AFCHQMVRSIVG  V +GRGRR AGE+ G++ A DR A+  PAPPHGL LW V Y
Sbjct:   73 VAGRTDAGVHAWGQVVSFDTNEAGFDATNLQQTLNKLLGPSIAVRATSVAAPDFDARFSARSRRYRYTVLNRAVPDPFLAATAWHVPAALDLAALRLGCDALYGEQDFASFCRRPREGQGHPPASLVRRVLDAGWGEVDEGVLRFEIEASAFCHQMVRSIVGTLVDMGRGRRRAGEMAGIIRAADRAAAGQPAPPHGLCLWLVRY 277          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A538B6R7_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538B6R7_9ACTN)

HSP 1 Score: 241 bits (616), Expect = 5.490e-77
Identity = 115/203 (56.65%), Postives = 145/203 (71.43%), Query Frame = 0
Query:    2 SGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 204
            +GRTD GVHAWGQV+SFD  E   D E + + +N  + P +V RDA    + F AR SA+ RRYR+ VLN P+P PFL+ T W V  PLD  ++ LACDP+IGEHDFSSFCR P+    P+VSLVR+V  A W DLG+GVLRF+I+  AFCHQMVRS+VG  V +GRGR++AG++  ++ A DR A+  PAPPHGL LW V Y
Sbjct:   90 AGRTDKGVHAWGQVVSFDAEEFGLDLEALQKSLNRMLGPAIVVRDAEKAHNSFDARRSAVARRYRYTVLNRPVPDPFLARTSWHVTAPLDCRALTLACDPVIGEHDFSSFCRLPE----PDVSLVRKVHDARWLDLGNGVLRFDIEAGAFCHQMVRSLVGTMVDIGRGRKTAGDMAAIIRAEDRAAASQPAPPHGLCLWEVVY 288          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: UPI001C62DF49 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62DF49)

HSP 1 Score: 239 bits (609), Expect = 4.330e-76
Identity = 122/208 (58.65%), Postives = 145/208 (69.71%), Query Frame = 0
Query:    2 SGRTDAGVHAWGQVLSFDVPEAKA----DPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDYP 205
            +GRTD GVHA GQVL+ DV EA+     D   + R +N    PEV  RD ++V D F ARFSA  RRYR+++ N P P PF +   W V  PL LA++RLACDPLIG+HDFS+FCR+PK G   E S+VRRVT A W   GDG LRFEI+ +AFCH MVRSIVG  VAVG GR +AG++RG LA+RDR  S   APPHGLTLW V YP
Sbjct:   63 AGRTDRGVHAHGQVLTVDVAEARVARPGDLAALVRSVNKMCGPEVAVRDPQLVDDSFDARFSATARRYRYRIWNHPEPDPFTARQAWHVEKPLALAALRLACDPLIGQHDFSTFCRKPK-GREVEPSMVRRVTEARWIVEGDGHLRFEIEASAFCHHMVRSIVGTMVAVGVGRMTAGDVRGALASRDRARSGDMAPPHGLTLWTVRYP 269          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A3N5K788_9ACTN (tRNA pseudouridine synthase A n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5K788_9ACTN)

HSP 1 Score: 238 bits (607), Expect = 6.750e-76
Identity = 116/205 (56.59%), Postives = 141/205 (68.78%), Query Frame = 0
Query:    2 SGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDYPD 206
            +GRTDAGVHAWGQV++FD      D   + R +N    P++V R   I PD F AR SA+ RRYR+ VLN P+P PFL+ T W +  PLDLA MRL CDP IGEHDF+SFCR+      P+ SLVR V  A W DLGDG+LRFEI+ T+FC QMVR+IVG  V VG GR+ AGE+  +L ARDR  + + APP GL+LW V YPD
Sbjct:   48 AGRTDAGVHAWGQVVTFDTDFDPLDLAALQRSVNGMCAPKIVVRALEIAPDGFDARHSAVHRRYRYTVLNRPVPDPFLAATTWHLAAPLDLAGMRLGCDPFIGEHDFASFCRK-----APDRSLVRTVHSAEWDDLGDGLLRFEIEATSFCQQMVRAIVGTLVEVGLGRKHAGEVAAILRARDRAVAGALAPPQGLSLWEVGYPD 247          
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Match: A0A7K0JT79_9ACTN (tRNA pseudouridine synthase (Fragment) n=1 Tax=Acidiferrimicrobium australe TaxID=2664430 RepID=A0A7K0JT79_9ACTN)

HSP 1 Score: 238 bits (606), Expect = 9.260e-76
Identity = 118/203 (58.13%), Postives = 142/203 (69.95%), Query Frame = 0
Query:    2 SGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIVPDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACDPLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTAFCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLWAVDY 204
            +GRTDAGVHAWGQV++ DV  A AD   + R +N  +  EVV R A      F AR SA  RRYR+ VLN P+  PF ++  W V  PLDLA+MRLACDPL GEHDF+SFCRRP     PE SLVRRV  A W D GDGVLRFEI+ ++FCHQMVRS+VG  V VG+G++ AGE+ G++ ARDR+A+   APP GL LW V Y
Sbjct:   68 AGRTDAGVHAWGQVVTLDV-RAGADLRALVRSLNRALHGEVVVRAAAWAEPGFDARHSATSRRYRYSVLNRPVADPFRAQVTWHVERPLDLAAMRLACDPLFGEHDFASFCRRP----APEASLVRRVGDARWVDEGDGVLRFEIEASSFCHQMVRSVVGMMVEVGKGKKRAGEVAGIIGARDRSAAGGMAPPQGLCLWQVGY 265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101431.299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E38DB488.410e-8361.95tRNA pseudouridine(38-40) synthase TruA n=2 Tax=Rh... [more]
UPI001AA06E5F1.910e-8059.52tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Rh... [more]
A0A5Q2RGF6_9ACTN2.890e-8058.62tRNA pseudouridine synthase A n=1 Tax=Actinomarini... [more]
A0A6I3F3W4_9ACTN8.760e-8056.37tRNA pseudouridine synthase A n=2 Tax=root TaxID=1... [more]
A0A7Y2N713_9ACTN3.990e-7960.77tRNA pseudouridine synthase A n=1 Tax=Acidimicrobi... [more]
A0A6N7FQ44_9ACTN2.740e-7757.07tRNA pseudouridine synthase A n=1 Tax=Acidimicrobi... [more]
A0A538B6R7_9ACTN5.490e-7756.65tRNA pseudouridine synthase A n=1 Tax=Actinomyceti... [more]
UPI001C62DF494.330e-7658.65tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Ia... [more]
A0A3N5K788_9ACTN6.750e-7656.59tRNA pseudouridine synthase A n=1 Tax=Actinomyceti... [more]
A0A7K0JT79_9ACTN9.260e-7658.13tRNA pseudouridine synthase (Fragment) n=1 Tax=Aci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.580coord: 1..60
e-value: 9.4E-14
score: 53.6
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASEcoord: 2..204
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 61..207
e-value: 4.7E-41
score: 141.8
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 98..205
e-value: 2.9E-24
score: 85.6
coord: 2..58
e-value: 4.9E-5
score: 23.7
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 2..204
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 2..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101431contigM-pyrifera_M_contig101431:22..642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101431.299.1mRNA_M-pyrifera_M_contig101431.299.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101431 22..666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101431.299.1 ID=prot_M-pyrifera_M_contig101431.299.1|Name=mRNA_M-pyrifera_M_contig101431.299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp
MSGRTDAGVHAWGQVLSFDVPEAKADPERITRVINVGMQPEVVCRDARIV
PDDFSARFSAIGRRYRFQVLNTPMPSPFLSETMWWVGDPLDLASMRLACD
PLIGEHDFSSFCRRPKSGDGPEVSLVRRVTRAHWSDLGDGVLRFEIDGTA
FCHQMVRSIVGFHVAVGRGRRSAGELRGVLAARDRNASVSPAPPHGLTLW
AVDYPDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020095PsdUridine_synth_TruA_C
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf