prot_M-pyrifera_M_contig101335.279.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101335.279.1
Unique Nameprot_M-pyrifera_M_contig101335.279.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length181
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101335.279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 50..68
e-value: 190.0
score: 4.0
coord: 73..92
e-value: 65.0
score: 7.5
coord: 28..49
e-value: 18.0
score: 11.8
coord: 2..21
e-value: 46.0
score: 8.6
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 48..181
coord: 2..116
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..181
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 49..71
e-value: 31.0
score: 9.2
coord: 2..25
e-value: 0.023
score: 23.8
coord: 73..96
e-value: 0.26
score: 20.4
coord: 97..119
e-value: 54.0
score: 7.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..70
e-value: 8.3E-13
score: 49.6
coord: 71..181
e-value: 1.2E-19
score: 71.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 50..109
e-value: 8.4E-8
score: 31.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101335contigM-pyrifera_M_contig101335:77..671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101335.279.1mRNA_M-pyrifera_M_contig101335.279.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101335 77..671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101335.279.1 ID=prot_M-pyrifera_M_contig101335.279.1|Name=mRNA_M-pyrifera_M_contig101335.279.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
NLPKLEYLYLSRNRLVSLTAGADDGCLPDALRLLDVSRNSISCLDLPELP
QLRYLKASNNDISQLGESFGMLMASLEHLDLQRNRLEVFPVTLCCCVSLS
CLLLNDNRIEFLPPELGLAMPNLELLDISRNKIITTAGLESATKLRIIRA
GQNQISQLPNWSEMLMSLTELTVLDLNQNQI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt