prot_M-pyrifera_M_contig101250.265.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101250.265.1
Unique Nameprot_M-pyrifera_M_contig101250.265.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig101250.265.1 vs. uniprot
Match: A0A5A8EJ33_CAFRO (Hypothetical protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EJ33_CAFRO)

HSP 1 Score: 127 bits (318), Expect = 2.430e-33
Identity = 58/125 (46.40%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:    4 AGEATTADWLSGDSWGLEGDGLRVLTISHIVTEGQGTWIFATDELFLGVGLIFFAVANFAQKK--FPAWFSWYTVVLGGLCVLSFFVEVARFGSWMLFSEIGGLLLAVIGFILFPIWIVILACYL 126
            AGE    DWL+G SW L  D LR +T+S+I  +GQ TW+FA DEL LG+ L+  AV   +++    PAWFSW +VV+G + +++F +E+ R G+W   S + G+  A +GFILFPIW++ + CYL
Sbjct:  132 AGERGVTDWLTGPSWNLHADQLRSITLSYIQQQGQFTWLFAMDELLLGIALLAAAVLGLSRRPGLMPAWFSWLSVVIGVIAIINFGLELGRLGAWQTLSLVAGITAAAVGFILFPIWLIAVGCYL 256
[Close]
BLAST of mRNA_M-pyrifera_M_contig101250.265.1 vs. uniprot
Match: A0A812YU05_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YU05_9DINO)

HSP 1 Score: 107 bits (268), Expect = 7.890e-26
Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:    1 LQFAGEATTADWLSGDSWGLEGDGLRVLTISHIVTEGQGTWIFATDELFLGVGLIFFAVANFAQKKFPAWFSWYTVVLGGLCVLSFFVEVARFGSWMLFSEIGGLLLAVIGFILFPIWIVILACY 125
            L  AG AT +DW+   S+ LE   LR LT++++V  G  TW+FA DEL LGVGL+  +   ++  + P W +    V G L +++FF+EVARFG+W L S I GL+   IGFI+ P+W++ L  Y
Sbjct:  124 LVAAGRATVSDWIYR-SFTLEPSDLRALTLANLVARGSNTWLFALDELLLGVGLLTISCLVYSVGQLPRWVAHVGTVGGILGIINFFIEVARFGNWALLSVIAGLIAGTIGFIILPVWLIGLGLY 247
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101250.265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5A8EJ33_CAFRO2.430e-3346.40Hypothetical protein n=2 Tax=Cafeteria roenbergens... [more]
A0A812YU05_9DINO7.890e-2644.00Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..90
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 41..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101250contigM-pyrifera_M_contig101250:147..527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101250.265.1mRNA_M-pyrifera_M_contig101250.265.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101250 147..527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101250.265.1 ID=prot_M-pyrifera_M_contig101250.265.1|Name=mRNA_M-pyrifera_M_contig101250.265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
LQFAGEATTADWLSGDSWGLEGDGLRVLTISHIVTEGQGTWIFATDELFL
GVGLIFFAVANFAQKKFPAWFSWYTVVLGGLCVLSFFVEVARFGSWMLFS
EIGGLLLAVIGFILFPIWIVILACYLP
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