prot_M-pyrifera_M_contig10119.254.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10119.254.1
Unique Nameprot_M-pyrifera_M_contig10119.254.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length104
Homology
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 5.930e-39
Identity = 72/103 (69.90%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    1 VVGFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPYNANKSRHMMVVGGEAVEGGXXXXXGVLVSMNVVEVLAEIKVLGGDMLESVHVS 103
            VVGFD IGDLV+ELRR+FGHLAVFFSPGSAG++G+IG+VWRP+AFVPRP N N+S+HMMVVGGE   GG       +  +NVVEVL+E+KV+GGDM+E+VHVS
Sbjct: 1163 VVGFDPIGDLVSELRRRFGHLAVFFSPGSAGASGIIGLVWRPTAFVPRPNNVNRSQHMMVVGGEGARGGGEVAT--MSVLNVVEVLSEMKVVGGDMIEAVHVS 1263          
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: A0A836CBT1_9STRA (Nrap protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT1_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.010e-9
Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 0
Query:    3 GFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPYNANKSRHMMVVGGEAVEGGXXXXXG-----------VLVSMNVVEVLAEIKVLGGDMLESV 100
            G D +  LV ELRR+FGHLA+F     AG  G + VVWRP+AF+P P     +R+       AV G XXXXX             L   NV +VLAE++ + GDM ++V
Sbjct: 1322 GLDPVAQLVRELRRRFGHLALFLRDALAG--GSVAVVWRPAAFLPAPLAPLAARYAA----PAVAGXXXXXXXXXXXXXALPVDALAVPNVAQVLAEMRAVAGDMADAV 1424          
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: A0A836CCE1_9STRA (Nrap protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.920e-8
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0
Query:    3 GFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPYNANKSRHMMVVGGEAVEGGXXXXXG------VLVSMNVVEVLAEIKVLGGDMLESV 100
            G D +  LV ELRR+FGHLA+F     AGS+  + VVWRP+AF+P P     +R+            XXXXX        L   NV ++LAE++ + GDM ++V
Sbjct:  969 GLDPVAQLVRELRRRFGHLALFLRDALAGSS--VAVVWRPAAFLPAPLAPLAARYAAXXXXXXXXXXXXXXXXXALPADALSVPNVAQILAEMRAVAGDMADAV 1070          
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: F6YWB6_CIOIN (Nucleolar protein 6 n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6YWB6_CIOIN)

HSP 1 Score: 53.5 bits (127), Expect = 5.160e-6
Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    1 VVGFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPYNANKSRHMMVVGGEAVEGGXXXXXGVLVSMNVVEVLAEIKVLGGDMLESV 100
            VV FD +   V +L+  F  LA+FF   + G   M+GV+W+P+AF P+P+NA+ S  ++   G  V              +V  ++ + K+LG  +++S+
Sbjct:  738 VVNFDPMQLYVNDLKASFSELAMFFYDINGGC--MVGVLWKPTAFQPKPFNASSSSCILQDDGNVVP-------------DVPSIVEDFKILGDGVVDSI 822          
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: L8GDM1_ACACA (Nucleolar RNAassociated protein alpha isoform, putative (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GDM1_ACACA)

HSP 1 Score: 53.1 bits (126), Expect = 6.670e-6
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    2 VGFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPY 50
            VG D + + ++ELR +FGHLA+FF     G   +IGVVW+P  F P+P+
Sbjct:  344 VGLDLVENYLSELRARFGHLALFFHNALEGR--VIGVVWKPGTFAPKPF 390          
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: A0A7J8IPS5_ROUAE (Nucleolar protein 6 n=6 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8IPS5_ROUAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.400e-5
Identity = 32/103 (31.07%), Postives = 57/103 (55.34%), Query Frame = 0
Query:    1 VVGFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPYNANKSRHMMVVG--GEAVEGGXXXXXGVLVSMNVVEVLAEIKVLGGDMLESVH 101
            V+G+D     +A+LR+ FG LA+FF     G   +IGV+W P++F P+ + A+ ++  MVV   GE+V           +  N+  +L +  +LG  ++++V 
Sbjct: 1049 VLGYDPPQLYLAQLRKAFGELALFFYDQHGGE--VIGVLWNPTSFRPQHFKASNTKGHMVVSQSGESV-----------IVPNIEAILEDFAILGEGLVQTVE 1138          
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Match: A0A397U274_9GLOM (U3 small nucleolar RNA-associated protein 22 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U274_9GLOM)

HSP 1 Score: 50.8 bits (120), Expect = 4.640e-5
Identity = 23/61 (37.70%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 VVGFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPYNANKSRHMMVV 61
            ++GFD +   + ELR+ +  +A+FF     G+  +IGVVW+P+ F PRP+ AN   + ++V
Sbjct: 1038 MIGFDPVEYYLDELRKLYSDVALFFHDKHGGT--IIGVVWKPTNFTPRPWKANTEINSILV 1096          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10119.254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FGX0_ECTSI5.930e-3969.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBT1_9STRA3.010e-942.20Nrap protein-domain-containing protein n=1 Tax=Tri... [more]
A0A836CCE1_9STRA1.920e-840.38Nrap protein-domain-containing protein n=1 Tax=Tri... [more]
F6YWB6_CIOIN5.160e-631.00Nucleolar protein 6 n=1 Tax=Ciona intestinalis Tax... [more]
L8GDM1_ACACA6.670e-646.94Nucleolar RNAassociated protein alpha isoform, put... [more]
A0A7J8IPS5_ROUAE3.400e-531.07Nucleolar protein 6 n=6 Tax=Rousettus aegyptiacus ... [more]
A0A397U274_9GLOM4.640e-537.70U3 small nucleolar RNA-associated protein 22 n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035371Nrap protein, domain 6PFAMPF17407Nrap_D6coord: 2..100
e-value: 1.2E-15
score: 57.9
IPR005554NOL6/Upt22PANTHERPTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINcoord: 1..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10119contigM-pyrifera_M_contig10119:9680..9991 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10119.254.1mRNA_M-pyrifera_M_contig10119.254.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10119 9680..9991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10119.254.1 ID=prot_M-pyrifera_M_contig10119.254.1|Name=mRNA_M-pyrifera_M_contig10119.254.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
VVGFDAIGDLVAELRRQFGHLAVFFSPGSAGSAGMIGVVWRPSAFVPRPY
NANKSRHMMVVGGEAVEGGEGGEGGVLVSMNVVEVLAEIKVLGGDMLESV
HVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035371Nrap_D6
IPR005554NOL6/Upt22