prot_M-pyrifera_M_contig101150.245.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101150.245.1
Unique Nameprot_M-pyrifera_M_contig101150.245.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A7S1C583_9STRA (Beta-amylase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C583_9STRA)

HSP 1 Score: 151 bits (381), Expect = 5.640e-41
Identity = 76/136 (55.88%), Postives = 90/136 (66.18%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQTNP---FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD + + N L +PN L S L  LA  GV GVM DVWWGL E S+ QAYNFSAY ELA++V  + +    VMS H CGGNVGD CNIP+PSW R T+    +Y D +G KD EY+SLF D  A   GRTP+Q Y
Sbjct:   71 MLQLDVVNSNNELNDPNGLKSQLQQLASGGVAGVMGDVWWGLCERSAPQAYNFSAYKELADMVQGAGMSYHPVMSFHQCGGNVGDKCNIPLPSWARSTSTDGVWYQDAQGNKDYEYISLFADETAAFGGRTPIQIY 206          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A7R9ZVU5_9DINO (Beta-amylase (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZVU5_9DINO)

HSP 1 Score: 141 bits (356), Expect = 6.570e-40
Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQTNP-FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD +TNE  L     L+S L  L GA V+G+M DVWWG+TEP+ +AYNF AY +L  +     +K+Q V S HSCGGNVGD+CNIP+PS+V  T   +Y D EG +D EY+SLF D+  +  GRTP+Q Y
Sbjct:   41 MLPLDTVTNEGDLKEQGTLASQLDQLKGAQVDGIMTDVWWGVTEPNPKAYNFHAYQQLVKMAKDRGMKVQFVTSFHSCGGNVGDSCNIPLPSFVTGTGGIWYKDHEGNEDKEYISLFADNATVG-GRTPLQMY 172          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A6A2YX00_HIBSY (Beta-amylase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YX00_HIBSY)

HSP 1 Score: 135 bits (340), Expect = 6.770e-37
Identity = 70/138 (50.72%), Postives = 87/138 (63.04%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD +T+   L  P  ++++L  L  AGVEGVM D WWGL E      YN+  Y EL  +V    LKLQVVMS H CGGNVGD+C+IP+P WV Q    NP   Y D+ G ++ EY+SL  DSV +  GRTP+QAY
Sbjct:   86 MLPLDTVTHGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLQEISKNPDLVYTDKSGKRNPEYISLGCDSVPVLRGRTPIQAY 223          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A8K0MJH9_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MJH9_9ROSA)

HSP 1 Score: 138 bits (348), Expect = 7.040e-36
Identity = 70/138 (50.72%), Postives = 89/138 (64.49%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD +T+  +L  P  ++++L  L  AGVEGVM D WWGL E      YN+  Y EL ++VH   LKLQVVMS H CGGNVGD+CNIP+P WV +    NP   Y DR G ++ EY+SL  DS+ +  GRTP+Q Y
Sbjct:   97 MLPLDTVTHGGSLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVHMVHKHGLKLQVVMSFHQCGGNVGDSCNIPLPPWVLEETSKNPDLVYTDRSGRRNPEYISLGCDSMPVLRGRTPIQVY 234          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A6A2X8K5_HIBSY (Beta-amylase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X8K5_HIBSY)

HSP 1 Score: 137 bits (345), Expect = 1.890e-35
Identity = 71/138 (51.45%), Postives = 89/138 (64.49%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD +T+  +L  P  +S++L  L  AGVEGVM D WWGL E      YN+  YVEL  +V    LKLQVVMS H CGGNVGD+C+IP+P WV Q    NP   Y D+ G ++ EY+SL  DS+ +  GRTP+QAY
Sbjct:  104 MLPLDTVTHGGSLNKPRAMSASLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYVELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLQEISKNPDLVYTDKSGRRNPEYISLGCDSLPVLRGRTPIQAY 241          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A812XM47_SYMPI (Beta-amylase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XM47_SYMPI)

HSP 1 Score: 138 bits (348), Expect = 2.230e-35
Identity = 67/133 (50.38%), Postives = 93/133 (69.92%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVR-QTNPFYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD +TN   L +P+KL S L  L    V+GVMADVWWG TEPS+++Y F  Y +L ++  S+ LK+Q+V S H CGGNVGD C+IP+P++V    + +Y D+ G +D EY+SLF D+V + +GRTP+Q Y
Sbjct:    1 MLGLDAVTNSGDLKDPDKLRSQLQQLKSGNVDGVMADVWWGATEPSAKSYKFDGYRQLLDMCKSTGLKVQLVTSFHQCGGNVGDTCDIPLPAFVTGHPDIWYKDQHGHEDKEYISLFADNVTI-EGRTPLQMY 132          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A438ITS1_VITVI (Beta-amylase n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438ITS1_VITVI)

HSP 1 Score: 132 bits (331), Expect = 2.280e-35
Identity = 66/138 (47.83%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWV-----RQTNPFYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD ++    L  P  ++++L  L  AGVEGVM D WWGL E      YN+  Y EL  +V    LKLQVVMS H CGGNVGD+C+IP+P WV     + T+  Y DR G ++ EY+SL  DS+ +  GRTP+Q Y
Sbjct:   86 MLPLDTVSFGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVY 223          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A2P5YQ45_GOSBA (Beta-amylase n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5YQ45_GOSBA)

HSP 1 Score: 130 bits (328), Expect = 2.790e-35
Identity = 70/138 (50.72%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQA-YNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD IT   +L  P  + ++L  L  AGVEGVM D WWGL E      YN+  Y EL  +V    LKLQVVMS H CGGNVGD+C+IP+P WV +    NP   Y DR G ++ EY+SL  DSV +  GR P+QAY
Sbjct:   86 MLPLDTITLGGSLNKPRAMKTSLMALKSAGVEGVMVDAWWGLVEKDGPLNYNWEGYAELVKMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRLGRRNPEYISLGCDSVPVLRGRKPIQAY 223          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: UPI001CC53D82 (beta-amylase 3, chloroplastic-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC53D82)

HSP 1 Score: 136 bits (343), Expect = 3.320e-35
Identity = 71/138 (51.45%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD ++    L  P  L+++L TL  AGVEGVM D WWGL E      YN+  YVEL  +V    LKLQVVMS H CGGNVGD+C+IP+P WV +    NP   Y DR G ++ EY+SL  DS+ +  GRTP+QAY
Sbjct:   91 MLPLDTVSISGNLNRPRALNASLMTLKSAGVEGVMVDAWWGLVEKDGPMKYNWDGYVELVQMVQRHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSLPVLKGRTPIQAY 228          
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Match: A0A7J6V518_THATH (Beta-amylase (Fragment) n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V518_THATH)

HSP 1 Score: 131 bits (330), Expect = 3.890e-35
Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    1 MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSS-QAYNFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQT---NP--FYVDREGGKDAEYVSLFFDSVALSDGRTPVQAY 132
            ML LD +T    L  P  L+++L  L  +GVEGVM D WWGL E +    YN+S YV+L  +V    LK+QVVMS H CGGNVGD+C+IP+P WV +    NP   Y D+ G ++ EY+SL  DS+ +  GRTP+Q Y
Sbjct:   92 MLPLDTVTIAGNLHRPKALNASLMALKSSGVEGVMVDAWWGLVEKNGPMKYNWSGYVDLIQMVEKHGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDIVYTDKSGRRNPEYISLGCDSLPVLAGRTPIQVY 229          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101150.245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C583_9STRA5.640e-4155.88Beta-amylase n=1 Tax=Bicosoecida sp. CB-2014 TaxID... [more]
A0A7R9ZVU5_9DINO6.570e-4052.63Beta-amylase (Fragment) n=1 Tax=Pyrodinium bahamen... [more]
A0A6A2YX00_HIBSY6.770e-3750.72Beta-amylase n=1 Tax=Hibiscus syriacus TaxID=10633... [more]
A0A8K0MJH9_9ROSA7.040e-3650.72Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A6A2X8K5_HIBSY1.890e-3551.45Beta-amylase n=2 Tax=Hibiscus syriacus TaxID=10633... [more]
A0A812XM47_SYMPI2.230e-3550.38Beta-amylase n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A438ITS1_VITVI2.280e-3547.83Beta-amylase n=1 Tax=Vitis vinifera TaxID=29760 Re... [more]
A0A2P5YQ45_GOSBA2.790e-3550.72Beta-amylase n=1 Tax=Gossypium barbadense TaxID=36... [more]
UPI001CC53D823.320e-3551.45beta-amylase 3, chloroplastic-like n=1 Tax=Telopea... [more]
A0A7J6V518_THATH3.890e-3548.55Beta-amylase (Fragment) n=1 Tax=Thalictrum thalict... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001554Glycoside hydrolase, family 14PRINTSPR00750BETAAMYLASEcoord: 30..44
score: 68.33
coord: 72..93
score: 71.82
IPR001554Glycoside hydrolase, family 14PFAMPF01373Glyco_hydro_14coord: 1..116
e-value: 1.2E-30
score: 106.8
IPR001554Glycoside hydrolase, family 14PANTHERPTHR31352FAMILY NOT NAMEDcoord: 1..132
NoneNo IPR availableGENE3D3.20.20.80coord: 1..132
e-value: 1.4E-46
score: 161.0
NoneNo IPR availablePANTHERPTHR31352:SF1BETA-AMYLASE 3, CHLOROPLASTICcoord: 1..132
IPR018238Glycoside hydrolase, family 14, conserved sitePROSITEPS00506BETA_AMYLASE_1coord: 76..84
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 2..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101150contigM-pyrifera_M_contig101150:275..670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101150.245.1mRNA_M-pyrifera_M_contig101150.245.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101150 251..670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101150.245.1 ID=prot_M-pyrifera_M_contig101150.245.1|Name=mRNA_M-pyrifera_M_contig101150.245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MLNLDFITNENTLANPNKLSSNLATLAGAGVEGVMADVWWGLTEPSSQAY
NFSAYVELANIVHSSSLKLQVVMSAHSCGGNVGDACNIPIPSWVRQTNPF
YVDREGGKDAEYVSLFFDSVALSDGRTPVQAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001554Glyco_hydro_14
IPR018238Glyco_hydro_14_CS
IPR017853Glycoside_hydrolase_SF