prot_M-pyrifera_M_contig101110.236.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig101110.236.1
Unique Name	prot_M-pyrifera_M_contig101110.236.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	104

Homology

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BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A218X821_PUNGR (Ribulose bisphosphate carboxylase large chain n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218X821_PUNGR)

HSP 1 Score: 208 bits (530), Expect = 6.180e-67
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIEPVAGEE+Q+
Sbjct:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQY 104

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BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A251N629_PRUPE (Ribulose bisphosphate carboxylase large chain n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251N629_PRUPE)

HSP 1 Score: 206 bits (524), Expect = 2.480e-66
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTET+AS+GFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWT+GL++LDRYKGR YHIEPVAGEESQF
Sbjct:    1 MSCREGLMSPQTETEASIGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTEGLSNLDRYKGRCYHIEPVAGEESQF 104

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BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A6D2JYW9_9BRAS (Ribulose bisphosphate carboxylase large chain n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JYW9_9BRAS)

HSP 1 Score: 205 bits (521), Expect = 4.960e-66
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            M+CREGLMSPQTETKASVGFKAGVK+YKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIEPV GEE+QF
Sbjct:    1 MTCREGLMSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQF 104

[Close]

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A1R3L168_9ROSI (Ribulose bisphosphate carboxylase large chain n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3L168_9ROSI)

HSP 1 Score: 203 bits (517), Expect = 2.150e-65
Identity = 97/104 (93.27%), Postives = 101/104 (97.12%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTETKASVGFKAGVK+YKLTYYTP+Y+ KDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIEPVAGEE Q+
Sbjct:    1 MSCREGLMSPQTETKASVGFKAGVKEYKLTYYTPEYQVKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEEDQY 104

[Close]

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A0S2GIT6_9LAMI (Ribulose bisphosphate carboxylase large chain (Fragment) n=3 Tax=Salvia incertae sedis TaxID=2291027 RepID=A0A0S2GIT6_9LAMI)

HSP 1 Score: 200 bits (509), Expect = 5.250e-65
Identity = 95/104 (91.35%), Postives = 100/104 (96.15%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREG MSPQTETKASVGFKAGVK+YKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLT+LDRYKGR YHIEPV GE+ Q+
Sbjct:    1 MSCREGFMSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCYHIEPVPGEKDQY 104

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BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: UPI00090153A4 (uncharacterized protein LOC109132455 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00090153A4)

HSP 1 Score: 205 bits (521), Expect = 9.230e-65
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            M+CREGLMSPQTETKASVGFKAGVK+YKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIEPV GEE+QF
Sbjct:    1 MTCREGLMSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQF 104

[Close]

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A6G9J8K8_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) n=5 Tax=Petrosaviidae TaxID=1437197 RepID=A0A6G9J8K8_9ASPA)

HSP 1 Score: 204 bits (518), Expect = 1.010e-64
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIE V GE++Q+
Sbjct:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEVVVGEDNQY 104

[Close]

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A1R3K0P8_9ROSI (Ribulose bisphosphate carboxylase large chain n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3K0P8_9ROSI)

HSP 1 Score: 200 bits (509), Expect = 1.390e-64
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTETKASVGFKAGVK+YKLTYYT +Y+ KDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIEPVAGEE Q+
Sbjct:    1 MSCREGLMSPQTETKASVGFKAGVKEYKLTYYTSEYQVKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEEDQY 104

[Close]

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A6G9J8M7_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) n=3 Tax=Petrosaviidae TaxID=1437197 RepID=A0A6G9J8M7_9ASPA)

HSP 1 Score: 202 bits (515), Expect = 2.880e-64
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTP YETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIE V GEE+Q+
Sbjct:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPHYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVVGEENQY 104

[Close]

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Match: A0A6G9J756_9ASPA (Ribulose bisphosphate carboxylase large chain (Fragment) n=14 Tax=Epidendroideae TaxID=158332 RepID=A0A6G9J756_9ASPA)

HSP 1 Score: 202 bits (515), Expect = 2.880e-64
Identity = 98/104 (94.23%), Postives = 100/104 (96.15%), Query Frame = 0

Query:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGEESQF 104
            MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTP YETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGR YHIE V GEE+Q+
Sbjct:    1 MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPHYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVVGEENQY 104

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig101110.236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A218X821_PUNGR	6.180e-67	96.15	Ribulose bisphosphate carboxylase large chain n=1 ...	[more]
A0A251N629_PRUPE	2.480e-66	94.23	Ribulose bisphosphate carboxylase large chain n=1 ...	[more]
A0A6D2JYW9_9BRAS	4.960e-66	94.23	Ribulose bisphosphate carboxylase large chain n=1 ...	[more]
A0A1R3L168_9ROSI	2.150e-65	93.27	Ribulose bisphosphate carboxylase large chain n=1 ...	[more]
A0A0S2GIT6_9LAMI	5.250e-65	91.35	Ribulose bisphosphate carboxylase large chain (Fra...	[more]
UPI00090153A4	9.230e-65	94.23	uncharacterized protein LOC109132455 n=1 Tax=Camel...	[more]
A0A6G9J8K8_9ASPA	1.010e-64	94.23	Ribulose bisphosphate carboxylase large chain (Fra...	[more]
A0A1R3K0P8_9ROSI	1.390e-64	92.31	Ribulose bisphosphate carboxylase large chain n=1 ...	[more]
A0A6G9J8M7_9ASPA	2.880e-64	94.23	Ribulose bisphosphate carboxylase large chain (Fra...	[more]
A0A6G9J756_9ASPA	2.880e-64	94.23	Ribulose bisphosphate carboxylase large chain (Fra...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	PFAM	PF02788	RuBisCO_large_N	coord: 31..101 e-value: 2.8E-23 score: 82.3
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	GENE3D	3.30.70.150		coord: 29..104 e-value: 3.7E-30 score: 106.3
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	SUPERFAMILY	54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 16..103
IPR033966	RuBisCO	PANTHER	PTHR42704	FAMILY NOT NAMED	coord: 8..104
None	No IPR available	PANTHER	PTHR42704:SF4	RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN	coord: 8..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig101110	contig	M-pyrifera_M_contig101110:362..673 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig101110.236.1	mRNA_M-pyrifera_M_contig101110.236.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig101110 362..673 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig101110.236.1 ID=prot_M-pyrifera_M_contig101110.236.1|Name=mRNA_M-pyrifera_M_contig101110.236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVT
PQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRYYHIEPVAGE
ESQF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017443	RuBisCO_lsu_fd_N
IPR036422	RuBisCO_lsu_N_sf
IPR033966	RuBisCO