prot_M-pyrifera_M_contig10055.124.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10055.124.1
Unique Nameprot_M-pyrifera_M_contig10055.124.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length960
Homology
BLAST of mRNA_M-pyrifera_M_contig10055.124.1 vs. uniprot
Match: D7FQU6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU6_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 8.860e-107
Identity = 412/1009 (40.83%), Postives = 527/1009 (52.23%), Query Frame = 0
Query:    1 ASQLKAAQAGFFVRASRCVSSSVGWESADEVLSRAMDDTKIPSHIPSPCGSPTPPPSSRV--PLAAVVAAVRNADEGIEDPEGRSGTAVATRSISFNAGSTGINGRPVFTGKGRKTGDGDALDDHGRMQSEMKRRRSSGWFRRLTSSFQSNRERSASDELLERAESPLPEVVSYGDDSDAEDSARGDTPPSEKQSLEQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSGPRGVGGGYVGPVAVGPEAVTEQVAGLGEES--GXXXXXXXXXTLVSGRGXXRMETDEEESDDETGSYTTEGFGSDDAGDLWEGGRATGL--LGREG---GDGGRGN-----WAVEGDDGPSDAGGGSERTGAAPLERHLAGIENGGSGFAG-EVVEGAAP---AAALEVEVGSPPRNGGKRGEAGIDDGDEGGRDSXXXXXXXXS-KGGY-RVSDSRKFDSGDRKVSNGGSAAAEKAQSARLLSPPVIVTPMSPR-ASAAHSMGPPAPHSPVPPPSLPDAVLNSPLPNVSSERRSLFSPP-KPNSSPAISEASS-KESPRAWRMSWWARASDRHQ-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAARARRPGDEFAPAFSGGDAPAPAVVDRDGGAGKTLRGNGVEAAAXXXXX--AAERRTRDRLRRAGRLGNPWLSADTLVNAETRPLEAACRFLDVAGLARATGVCRSWGKRLGGEAGAREWVRCVRLADGVPEGCRAGFYLHVLYDQPSWVPKAHRSSSRVRPRPGVYEECLKKADAEEELSMTTSKKLQMIAEDMKEDGY-TPLLSADGPS-HEPSSALRS--GRAGRDNVEPSSAPRSYKWLKEIETDVLRTCPAD------AVGEFDGIIWRNSTST-------ITDRDSSPRRTPSTSPIKNNGSSLSGXXXXXXXXXXXXXXXAAVEAQXXXXXXXXAAGGVEGNGNIPE------AFWEGGGEEVVSRRFSVAGGGTREKLRRVLRAFAVYNRRVSYCQ 960
            AS LKAAQAGFFVRASRCVSSSV WES D+VLSRA  D +  +   +   +  PP +S V  P A VV+     + G E+ +G +  + A  ++     STGI+ R    GK +K GD D L +        KRRR+SGWF+RL SSFQ+NR RSAS+ELLE    P P    + D++D  DS   D      +S+ ++                                G   +  G    +A    A +   AG    +    XXXXXXXX       XX       ++D ETGS TTEGFGSDDAGDLW+G R+T +  L R      D G  +     W V     P     G E  G     +  AG  +G     G E++ GA P    A    E G   R+G     + +D       ++        S KGG  RV + R    G   V + G + AE A++  + SP  + T  SP     + S  PP+    +P P   +  +  PLP V+ E+R   SP  K  +SPAIS+ SS KESPRAWR+SWWA+ASDRH  PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A   G  FAP+ + GDAPA  V+D  GG  K      +++AA       A+ERR+R R  +  R   PWLS D L + +TR LEAA  +LDV  LA+A  VCR+W + L GE G + W+RCVRLADGVPE  RA FYLH+LYDQP WV KAH S S  RPRPGVY+ECL+KA+A++E ++  +K++Q I E+ + +G  +P   A   +    S  LR+  G    D   P+  PR +KWL+EIETDVLRTCP D      AV EFD ++ +N+ +        I D  + P    S      + SS                   AV           +   V+G  + P       A   GG   +V  +FS  GGG R+KLRRVLRAFAVYNRRVSYCQ
Sbjct:  271 ASSLKAAQAGFFVRASRCVSSSVVWESPDDVLSRATGDLQNTTRSTAE-DTRKPPAASHVAKPKAVVVSTDAAFEGGKEERDGGAAGSQAKSAVF----STGIHDRDTVKGKWKKGGDYDGLRND-----SSKRRRNSGWFKRLASSFQTNRPRSASEELLEEERMPSP----FNDNADEYDSGGDDDKKLCLRSIPRATASSSAKSPKGKLLFGGEDFW----------DGNSSLRNGNTAELATEAAATSSPDAGSDASATGAVXXXXXXXXXXXXXXXXXXXXXXXXDTDYETGSNTTEGFGSDDAGDLWDGRRSTLMAPLDRTSFMPNDNGHKSEEEEEWHVP----PEXESNGDEPEGGDSCGKGAAGSPSGAEEEEGVELMPGAHPEVGVAETSKEEGGASRSGIISPASDVDGTVPPAAENDGAPESARSVKGGRDRVDEERDGGRGGGLVKDSGDSVAEGAKAEDISSP--VPTRRSPYLVHCSPSRAPPSILPVLPEPGPKEDGVEDPLPPVAIEQRRTPSPLCKITASPAISDGSSCKESPRAWRLSWWAKASDRHPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSA---GGAFAPSRNAGDAPA--VMD--GGEKKASLEEALKSAATETVADAASERRSRRRWTQRRR-EKPWLSKDKLADPQTRALEAASEYLDVVALAKAVVVCRAWREPLAGEEGRQRWMRCVRLADGVPENRRAMFYLHILYDQPCWVQKAHGSKSSERPRPGVYQECLEKAEADQEETVA-AKEMQRILEEEERNGRASPSAGARAAALFRDSGGLRAVAGGCDGDGDTPAPPPRCHKWLEEIETDVLRTCPGDDAAGEDAVNEFDSVLSKNTAAAAASDGGEIGDTGTPPANESSRVRFSVSFSSFGSSNSSSTVKAVANRSSGAVAEDLGSDGRRSSTAPVQGRDSAPTEGEEVVAGGRGGSGAIVRNKFSATGGGMRDKLRRVLRAFAVYNRRVSYCQ 1240          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10055.124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQU6_ECTSI8.860e-10740.83Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23261:SF22GROUND-LIKE (GRD RELATED)coord: 50..384
NoneNo IPR availablePANTHERPTHR23261GROUNDHOG-RELATEDcoord: 50..384
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 811..960

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10055contigM-pyrifera_M_contig10055:3977..9429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10055.124.1mRNA_M-pyrifera_M_contig10055.124.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10055 3977..9429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10055.124.1 ID=prot_M-pyrifera_M_contig10055.124.1|Name=mRNA_M-pyrifera_M_contig10055.124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=960bp
ASQLKAAQAGFFVRASRCVSSSVGWESADEVLSRAMDDTKIPSHIPSPCG
SPTPPPSSRVPLAAVVAAVRNADEGIEDPEGRSGTAVATRSISFNAGSTG
INGRPVFTGKGRKTGDGDALDDHGRMQSEMKRRRSSGWFRRLTSSFQSNR
ERSASDELLERAESPLPEVVSYGDDSDAEDSARGDTPPSEKQSLEQSSER
SSERSSSEQSSGRSSSAQSSERSGQSNGSGPRGVGGGYVGPVAVGPEAVT
EQVAGLGEESGGNGGGGGVGTLVSGRGGGRMETDEEESDDETGSYTTEGF
GSDDAGDLWEGGRATGLLGREGGDGGRGNWAVEGDDGPSDAGGGSERTGA
APLERHLAGIENGGSGFAGEVVEGAAPAAALEVEVGSPPRNGGKRGEAGI
DDGDEGGRDSDGGESGGKSKGGYRVSDSRKFDSGDRKVSNGGSAAAEKAQ
SARLLSPPVIVTPMSPRASAAHSMGPPAPHSPVPPPSLPDAVLNSPLPNV
SSERRSLFSPPKPNSSPAISEASSKESPRAWRMSWWARASDRHQPPPPMS
TAGGDGDDDATVAGSSVAAALAAAAAGGEEAARARRPGDEFAPAFSGGDA
PAPAVVDRDGGAGKTLRGNGVEAAAAAAAVAAERRTRDRLRRAGRLGNPW
LSADTLVNAETRPLEAACRFLDVAGLARATGVCRSWGKRLGGEAGAREWV
RCVRLADGVPEGCRAGFYLHVLYDQPSWVPKAHRSSSRVRPRPGVYEECL
KKADAEEELSMTTSKKLQMIAEDMKEDGYTPLLSADGPSHEPSSALRSGR
AGRDNVEPSSAPRSYKWLKEIETDVLRTCPADAVGEFDGIIWRNSTSTIT
DRDSSPRRTPSTSPIKNNGSSLSGSGGSGGGSAGEGRVGAAVEAQAGSGE
AEAAAGGVEGNGNIPEAFWEGGGEEVVSRRFSVAGGGTREKLRRVLRAFA
VYNRRVSYCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf