prot_M-pyrifera_M_contig100115.27.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100115.27.1
Unique Nameprot_M-pyrifera_M_contig100115.27.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length218
Homology
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A5A8E5A5_CAFRO (Serine--tRNA ligase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E5A5_CAFRO)

HSP 1 Score: 290 bits (742), Expect = 1.010e-91
Identity = 141/210 (67.14%), Postives = 163/210 (77.62%), Query Frame = 0
Query:    8 EDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRF-IPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTR 215
            E G  +KYLIATSEQP+C FH  + L   ++P +YAGWS+CFRKEAGS GRD  GIFRVHQFEKIEQF V  P +SW +H+EM  TA  FYK+LGI Y V+ +VS ELN+AAA+K DLEGWFP   EYRELVSCSNCTDYQARA+ETRF    K   G K Y H LNSTLCATTRTICAILEN+QT +G++VPEALVPY+G   F+PF R
Sbjct:  248 EKGDSEKYLIATSEQPLCTFHRGDWLNPKDLPVKYAGWSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFVVCAPEDSWRIHEEMIATAEEFYKSLGIAYRVITLVSKELNNAAAKKYDLEGWFPGFSEYRELVSCSNCTDYQARAMETRFGAKTKADNGVKTYAHMLNSTLCATTRTICAILENYQTPDGVKVPEALVPYMGGTTFLPFVR 457          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A152A6B6_9MYCE (Serine--tRNA ligase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6B6_9MYCE)

HSP 1 Score: 281 bits (718), Expect = 3.670e-90
Identity = 132/203 (65.02%), Postives = 158/203 (77.83%), Query Frame = 0
Query:   13 DKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGKEFIPFTR 215
            +KYLIATSEQP+  FH  E L E ++P +Y G+S+CFRKEAGSSG+D  GIFRVHQFEKIEQFC+T P +SWDMH+EM   A AFY+ LG+PY VV IVS  LN+AAA+K DLEGWFP  G YRELVSCSNCTDYQ+R +E R    K  + +K Y H LNSTL ATTR IC ILEN+QT +GI VP+ALVPY+G +F+PF +
Sbjct:  236 EKYLIATSEQPISAFHRGEWLEEKQLPLKYLGYSTCFRKEAGSSGKDTWGIFRVHQFEKIEQFCITEPEKSWDMHEEMLANAEAFYQELGLPYRVVSIVSGALNNAAAKKYDLEGWFPGYGTYRELVSCSNCTDYQSRDLEIRCGTKKAGQTQKKYVHMLNSTLAATTRVICCILENYQTDKGINVPKALVPYLGMDFLPFVK 438          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: I3TA49_LOTJA (Serine--tRNA ligase n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3TA49_LOTJA)

HSP 1 Score: 272 bits (695), Expect = 1.690e-89
Identity = 132/209 (63.16%), Postives = 156/209 (74.64%), Query Frame = 0
Query:   12 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGE--SWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 217
            DDKYLIAT+EQP+C +HL + +  +++P RYAG+SSCFRKEAGS GRD  GIFRVHQFEK+EQFC+T P +  SWDMH+EM   +  FYK L IPY VV IVS  LN AAA+K DLE WFPA+  YRELVSCSNCTDYQAR +E R+   K  +  K Y H LNSTL AT RTIC ILEN+Q  +G+ +PEAL PY+G K FIPF   P
Sbjct:   22 DDKYLIATAEQPLCAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDNDSWDMHEEMLKNSEDFYKELNIPYRVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCSNCTDYQARRLEIRYGQRKSNEQLKQYVHLLNSTLTATERTICCILENNQKDDGVEIPEALRPYMGGKSFIPFKNQP 230          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: L8GI72_ACACA (Serine--tRNA ligase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GI72_ACACA)

HSP 1 Score: 278 bits (711), Expect = 6.210e-89
Identity = 135/205 (65.85%), Postives = 162/205 (79.02%), Query Frame = 0
Query:   12 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGK-EFIPFTR 215
            D+KYLIATSEQP+  FH +E L   ++P RYAG SSCFRKEAG+ G+D  GIFRVHQFEKIEQFC+T P +SW+ H+ M  TA AFY++L +PYHVV IVS ELN+AAA+KLDLE WFPA GE+RELVS SNCTDYQ+R++E R    K+  GEK Y H LN+TLCATTRTIC ILEN+QT EG+ VP+ L PY+G  EFIPF +
Sbjct:  233 DEKYLIATSEQPISAFHAEEWLEPKDLPIRYAGTSSCFRKEAGAHGKDTWGIFRVHQFEKIEQFCLTEPEKSWEEHENMVKTAEAFYQSLELPYHVVAIVSGELNNAAAKKLDLEAWFPAFGEFRELVSASNCTDYQSRSLEVRCGSRKQ-GGEKKYVHMLNATLCATTRTICCILENYQTPEGVAVPKVLQPYLGGLEFIPFVK 436          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A7S0BR21_9RHOD (Serine--tRNA ligase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BR21_9RHOD)

HSP 1 Score: 270 bits (691), Expect = 7.830e-89
Identity = 131/212 (61.79%), Postives = 162/212 (76.42%), Query Frame = 0
Query:   10 GADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRP--GESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEV-KGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 217
            G  +KYLIATSEQP+  +H+ + +    +PK+Y G+S+CFRKEAGS GRD  GIFRVHQFEKIEQFC+T P   ESWD H++M   +  F+++LGIPY VV IVS  LN+AAA+KLDLEGW+PA   YRELVSCSNCTDYQ+R ++TRF  NK   +GEK + H LNSTLCATTR ICAILENHQT +G+ +PE L  Y+G KE + F+R P
Sbjct:   22 GVTEKYLIATSEQPIAAYHVDDWVDPKTLPKKYVGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCLTSPDDNESWDAHEDMIKASEEFHQSLGIPYRVVSIVSGALNNAAAKKLDLEGWYPAGSAYRELVSCSNCTDYQSRRLQTRFGSNKRGDQGEKKFVHMLNSTLCATTRVICAILENHQTDKGVVIPEPLRVYMGGKELMEFSRAP 233          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: F0ZTM5_DICPU (Serine--tRNA ligase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTM5_DICPU)

HSP 1 Score: 277 bits (709), Expect = 7.870e-89
Identity = 138/215 (64.19%), Postives = 160/215 (74.42%), Query Frame = 0
Query:    1 GGKGEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGKEFIPFTR 215
            G  GEE E     KYLIATSEQP+  FH  E L E E+PKRY G+S+CFRKEAGSSGRD  GIFRVHQFEKIEQFCVT P +SWDM +EM   +  FY+ LGIPY VV+IVS  LN+AA++K DLEGWFP    YRELVSCSNCTDYQ+R +E R    K+ + +K Y H LNSTL ATTR IC ILEN+QT  GI VPE L P++GK+FIPF +
Sbjct:  227 GAAGEENE-----KYLIATSEQPISAFHRGEWLDEKELPKRYVGYSTCFRKEAGSSGRDTWGIFRVHQFEKIEQFCVTEPEKSWDMMEEMISNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNTYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGITVPEPLRPFLGKDFIPFVK 436          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: UPI000D62E803 (serine--tRNA ligase-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62E803)

HSP 1 Score: 270 bits (689), Expect = 1.930e-88
Identity = 125/209 (59.81%), Postives = 156/209 (74.64%), Query Frame = 0
Query:   12 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPG--ESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 217
            DDKYLIAT+EQP+C +H+ + +   ++P RYAG+SSCFRKEAGS GRD  GIFRVHQFEK+EQFC+T P   +SW+MH+EM   +  FY+ L +PYH+V IVS  LN AAA+K DLE WFPA+  YRELVSCSNCTDYQ+R +E RF   K  +  K YCH LNSTL AT RT+C ILEN+Q  +G+ +PE L P++G K F+PF   P
Sbjct:   27 DDKYLIATAEQPLCAYHIDDWIHPTQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWEMHEEMIKNSEEFYQMLKLPYHIVSIVSGALNDAAAKKYDLEAWFPASSTYRELVSCSNCTDYQSRKLEIRFGQKKSNEQMKQYCHLLNSTLTATERTMCCILENYQREDGVEIPEVLQPFMGGKTFMPFQAPP 235          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A8K0MQK5_9ROSA (Uncharacterized protein n=2 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MQK5_9ROSA)

HSP 1 Score: 275 bits (704), Expect = 5.000e-88
Identity = 132/209 (63.16%), Postives = 160/209 (76.56%), Query Frame = 0
Query:   12 DDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPG--ESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPFTRMP 217
            DDKYLIAT+EQP+C +HL + +  +++P RYAG+SSCFRKEAGS GRD  GIFRVHQFEK+EQFC+T P   +SWDMH+EM   +  FYK L IPY VV IVS  LN AAA+K DLEGWFPA+  YRELVSCSNCTDYQ+R +E R+  NK+ +  KLY H LNSTL AT RTIC ILEN+Q  +G+ +PEAL P++G K F+PF   P
Sbjct:  228 DDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLEIRYGQNKKNEQTKLYVHLLNSTLTATERTICCILENNQKEDGVEIPEALRPFMGGKTFLPFKSKP 436          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A0G4ERX4_VITBC (Serine--tRNA ligase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERX4_VITBC)

HSP 1 Score: 275 bits (703), Expect = 1.790e-87
Identity = 132/211 (62.56%), Postives = 158/211 (74.88%), Query Frame = 0
Query:    4 GEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVG-KEFIPF 213
            GE+E DG  D +LIATSEQP+  FH  + LR  E PKRYAG S+CFRKEAGSSG+D+ GIFRVHQFEK+EQFC+T P ESW MH+EM   A  FY++L +PY V+ IVS  LN AAA+K DLE WFP    YRELVSCSNCTDYQAR +E R    K  + EK YCH LN+TL A+ RT+C ILEN+QT  G+RVP  L+PY+G +EF+PF
Sbjct:  238 GEKESDGTPDMFLIATSEQPISAFHRGDWLRPDECPKRYAGVSTCFRKEAGSSGKDMWGIFRVHQFEKVEQFCITSPEESWAMHEEMIGIAEEFYQSLELPYQVIAIVSGALNDAAAKKYDLEAWFPGYETYRELVSCSNCTDYQARQLEVRHGQKKSGEREKKYCHMLNATLVASQRTMCCILENYQTPTGVRVPRVLIPYMGGEEFLPF 448          
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Match: A0A8J4Q5C8_9MYCE (Serine--tRNA ligase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q5C8_9MYCE)

HSP 1 Score: 273 bits (699), Expect = 2.680e-87
Identity = 135/214 (63.08%), Postives = 161/214 (75.23%), Query Frame = 0
Query:    2 GKGEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFRKEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKALGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQARAVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPEALVPYVGKEFIPFTR 215
            G+GE+ E     KYLIATSEQP+  +H +E + E E+PK+YAG+S+ FRKEAGSSG+D  GIFRVHQFEKIEQFC+T P +SWDM  EM   A AFY+ LG+PY VV+IVS  LN+AAARK DLE WFP   EYRELVSCSNCTDYQ+R +E R    K+ + +K Y H LNSTL ATTR IC ILEN+QT  GI VP  L PY+G +FIPFT+
Sbjct:  226 GEGEDNE-----KYLIATSEQPISAYHRREWIEEKELPKKYAGYSTNFRKEAGSSGKDNWGIFRVHQFEKIEQFCITEPEKSWDMQDEMLGNAEAFYQELGLPYRVVNIVSGALNNAAARKYDLECWFPGYNEYRELVSCSNCTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGINVPTPLRPYLGMDFIPFTK 434          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100115.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8E5A5_CAFRO1.010e-9167.14Serine--tRNA ligase n=1 Tax=Cafeteria roenbergensi... [more]
A0A152A6B6_9MYCE3.670e-9065.02Serine--tRNA ligase n=1 Tax=Tieghemostelium lacteu... [more]
I3TA49_LOTJA1.690e-8963.16Serine--tRNA ligase n=1 Tax=Lotus japonicus TaxID=... [more]
L8GI72_ACACA6.210e-8965.85Serine--tRNA ligase n=1 Tax=Acanthamoeba castellan... [more]
A0A7S0BR21_9RHOD7.830e-8961.79Serine--tRNA ligase n=1 Tax=Rhodosorus marinus Tax... [more]
F0ZTM5_DICPU7.870e-8964.19Serine--tRNA ligase n=1 Tax=Dictyostelium purpureu... [more]
UPI000D62E8031.930e-8859.81serine--tRNA ligase-like n=1 Tax=Cynara cardunculu... [more]
A0A8K0MQK5_9ROSA5.000e-8863.16Uncharacterized protein n=2 Tax=Rhamnella rubriner... [more]
A0A0G4ERX4_VITBC1.790e-8762.56Serine--tRNA ligase n=1 Tax=Vitrella brassicaformi... [more]
A0A8J4Q5C8_9MYCE2.680e-8763.08Serine--tRNA ligase n=1 Tax=Polysphondylium violac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002317Serine-tRNA ligase, type1PRINTSPR00981TRNASYNTHSERcoord: 121..137
score: 49.89
coord: 52..64
score: 60.11
coord: 64..77
score: 59.79
coord: 139..155
score: 60.13
coord: 104..117
score: 37.3
IPR002317Serine-tRNA ligase, type1PANTHERPTHR11778SERYL-TRNA SYNTHETASEcoord: 10..215
NoneNo IPR availableGENE3D3.30.930.10coord: 2..218
e-value: 3.5E-86
score: 291.3
NoneNo IPR availablePANTHERPTHR11778:SF7SERINE--TRNA LIGASE, CYTOPLASMICcoord: 10..215
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 12..211
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 8..190
e-value: 4.6E-32
score: 111.4
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 26..204
score: 14.408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100115contigM-pyrifera_M_contig100115:8..661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100115.27.1mRNA_M-pyrifera_M_contig100115.27.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100115 8..661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100115.27.1 ID=prot_M-pyrifera_M_contig100115.27.1|Name=mRNA_M-pyrifera_M_contig100115.27.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp
GGKGEEEEDGADDKYLIATSEQPVCLFHLKESLREAEVPKRYAGWSSCFR
KEAGSSGRDLKGIFRVHQFEKIEQFCVTRPGESWDMHKEMSDTAAAFYKA
LGIPYHVVDIVSVELNSAAARKLDLEGWFPAAGEYRELVSCSNCTDYQAR
AVETRFIPNKEVKGEKLYCHFLNSTLCATTRTICAILENHQTAEGIRVPE
ALVPYVGKEFIPFTRMPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002317Ser-tRNA-ligase_type_1
IPR002314aa-tRNA-synt_IIb
IPR006195aa-tRNA-synth_II