mRNA_M-pyrifera_M_contig99886.22973.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99886.22973.1
Unique NamemRNA_M-pyrifera_M_contig99886.22973.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A2V6BZQ7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6BZQ7_9BACT)

HSP 1 Score: 322 bits (824), Expect = 4.470e-108
Identity = 152/221 (68.78%), Postives = 181/221 (81.90%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAM 663
            ENFLEPYLFNGK+T+SGMDVVS YVDQ+PD DM+R+VA +Y I IYPTI  ALC GGE+LAVD VLSI EHG YP NEKGQ  YPRKRFFD IV VFR+SGR  PV++DKHLSYRWD+A+ MYDTA+ ++   MAGSSVPLAER PP E+P  A+I  AVS+H G VESYDFHG+EVLQ+M+E+R G ETG+  VQFL+G+ALW AA  GLWS+ +A+ A+
Sbjct:   77 ENFLEPYLFNGKLTSSGMDVVSFYVDQFPDRDMAREVAAKYNIKIYPTIAGALCLGGEKLAVDGVLSICEHGKYPVNEKGQQEYPRKRFFDEIVAVFRESGRVAPVYNDKHLSYRWDWARVMYDTARGLNIPFMAGSSVPLAERRPPAEIPRGARITDAVSVHSGPVESYDFHGLEVLQAMVESRRGAETGVARVQFLQGEALWKAANNGLWSVELAQTAL 297          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A7V5UL05_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V5UL05_9PLAN)

HSP 1 Score: 321 bits (822), Expect = 2.160e-106
Identity = 157/226 (69.47%), Postives = 183/226 (80.97%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAELG 678
            ENFL PY FNG++   GMDVVS YVDQ+P+ DM+R +AK++ I IYPTI +AL  G   LAVDAVLSIGEHGNYP N+KGQ MYPRKRFFD IV VFR SGRT PVF+DKHLSYRWD+AKEM DTA+ M   LMAGSSVPLA+R PPLELP  A I  AVSIHGGGVESYDFHG+EVLQS++EAR GGE+G+  ++FL+ DALW AA++G WS+ +A  AM AELG
Sbjct:   59 ENFLNPYWFNGRVIDPGMDVVSFYVDQFPENDMARRIAKEFSIPIYPTISQALTLGTGSLAVDAVLSIGEHGNYPVNDKGQRMYPRKRFFDEIVAVFRKSGRTAPVFNDKHLSYRWDWAKEMVDTARQMGIPLMAGSSVPLAQRRPPLELPPQAAITDAVSIHGGGVESYDFHGLEVLQSIVEARRGGESGVVRLRFLDFDALWEAADRGDWSVDLARRAMQAELG 284          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A2V6FVA8_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FVA8_9BACT)

HSP 1 Score: 320 bits (821), Expect = 4.060e-106
Identity = 154/225 (68.44%), Postives = 183/225 (81.33%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAEL 675
            ENFLEPYLFNGK+T+SGM+VVS YVDQ+ + DM+R+VA +YGI IYPTI  ALC GGE+LAVD VLSIGEHG YP NEKGQ  YPRKRFFD IV VFR SGR  PV++DKHLSYRWD+AKEMYDTA+S+    MAGSSVPLA+R PP+E+P  A+I  AVSIH G VESYDFHG+EVLQ+M+E R   E G+ +VQFL+GDALW  A  GLWS  +A+AA+A ++
Sbjct:   16 ENFLEPYLFNGKLTSSGMEVVSFYVDQFAERDMAREVAARYGIKIYPTIPGALCLGGEQLAVDGVLSIGEHGKYPINEKGQQEYPRKRFFDEIVSVFRRSGRVAPVYNDKHLSYRWDWAKEMYDTARSLKIPFMAGSSVPLAQRRPPMEIPRGARITEAVSIHSGPVESYDFHGLEVLQAMVEFRRSAERGVSQVQFLQGDALWKTASDGLWSPELAQAALATDV 240          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A538PB17_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A538PB17_9BACT)

HSP 1 Score: 320 bits (820), Expect = 5.230e-105
Identity = 154/225 (68.44%), Postives = 183/225 (81.33%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAEL 675
            ENFLEPYLFNGK+T+ GM+VVS YVDQ+ + DM+R+VA +Y I IYPTI EALC GGE+LA+D VLSIGEHG YP NEKGQ  YPRKRFFD IV VFR SGR  P+F+DKHLS+RW++AKEMYDTAQ ++   MAGSSVPLAER P LELP  A+I  AVSIH G +ESYDFHG+EVLQSM+E R G ETG+  VQFL+G+ LW AA +GLWS  VA+AA++ +L
Sbjct:   16 ENFLEPYLFNGKVTSPGMEVVSFYVDQFSERDMAREVATRYHIRIYPTIAEALCLGGEKLAIDGVLSIGEHGKYPVNEKGQREYPRKRFFDEIVAVFRRSGRVAPIFNDKHLSFRWNWAKEMYDTAQRLEVPFMAGSSVPLAERRPRLELPRGARITEAVSIHSGPIESYDFHGLEVLQSMVEFRRGAETGVARVQFLQGEELWKAASEGLWSPDVAQAALSTDL 240          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A3E0P8R9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0P8R9_9BACT)

HSP 1 Score: 318 bits (815), Expect = 1.450e-104
Identity = 159/226 (70.35%), Postives = 184/226 (81.42%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAELG 678
            ENF++PYLFNG+ T  GM+VVS++VDQ  + DMSR VAKQ+ I ++ TI EAL  GG+ LAVDAVLSIGEHGNYP N KGQ  YPRK FFD IV VF+ SGR VPVF+DKHLSYRWD+AKEM DT+++M F LMAGSSVPLA+R P LELP DAKIE AVSIHGGGVESYDFH +EVLQS +EARAGGETG++ VQFLE + LW AA +G WS  +  AAMAAELG
Sbjct:   61 ENFVQPYLFNGQATEPGMEVVSMFVDQIGENDMSRGVAKQFDIPMFGTIEEALTCGGDELAVDAVLSIGEHGNYPTNAKGQVEYPRKEFFDQIVAVFKKSGRGVPVFNDKHLSYRWDWAKEMVDTSKAMGFPLMAGSSVPLAQRRPVLELPGDAKIEEAVSIHGGGVESYDFHALEVLQSQVEARAGGETGVERVQFLEAEPLWKAAAEGQWSPDLGAAAMAAELG 286          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A2E7L709_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7L709_9PLAN)

HSP 1 Score: 315 bits (807), Expect = 4.160e-104
Identity = 150/226 (66.37%), Postives = 182/226 (80.53%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAELG 678
            ENFLEPYLFNG++  SG ++VS+YVDQ+P  DM+RDVA QYGI IYPTI EA+C+GG RL VDAVLSI EHG Y H  +GQ  YPRKRF D I EVF+ SG +VPVF+DKHLSYRWD+A+++Y  +Q     LMAGSSVPLA+R PPLELP  A I  AVSIHGG VE+YDFH +EVLQS++E+R GGETG++ ++FL+G+ LWNAA +G WS  +AEAAMAAELG
Sbjct:   12 ENFLEPYLFNGRVVESGCEIVSMYVDQFPRSDMARDVADQYGIRIYPTIREAVCNGGRRLGVDAVLSIAEHGRYGHTRRGQKRYPRKRFLDEIFEVFQASGHSVPVFNDKHLSYRWDWAEQIYQRSQREGIPLMAGSSVPLAQRDPPLELPHAADITEAVSIHGGPVEAYDFHALEVLQSLVESRRGGETGVRGIEFLDGNRLWNAARRGRWSADLAEAAMAAELG 237          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: UPI00029B1059 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029B1059)

HSP 1 Score: 317 bits (811), Expect = 4.850e-104
Identity = 151/227 (66.52%), Postives = 185/227 (81.50%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDG-DMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAELG 678
            ENFLEPYLFNG++T SGMDV  +YVDQ+P+G D++RD+A +YGI IYPTI EAL  GG++LAVDAVLSIGEHG YP NE+GQ MYPRK FFD I  VFR SGR+VPVF+DKHLSYRWD++ EM  TAQ +    MAGSSVPLA+R PP E+P+ A IE AVS+H GG+ESYDFH +EVLQS++E+R GGETG++E+Q LEGDA+W AA++G W+  +A AAM A  G
Sbjct:   59 ENFLEPYLFNGQVTESGMDVPCMYVDQFPEGRDLARDIALRYGIKIYPTIAEALTCGGDKLAVDAVLSIGEHGKYPINERGQQMYPRKEFFDQIAAVFRQSGRSVPVFNDKHLSYRWDWSVEMMQTAQELKIPFMAGSSVPLAQRRPPFEMPSQAVIEEAVSVHSGGMESYDFHAMEVLQSLVESRKGGETGVKEIQVLEGDAVWKAADEGRWNESLAAAAMKAAEG 285          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A2V5UAT5_9BACT (Uncharacterized protein n=3 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5UAT5_9BACT)

HSP 1 Score: 317 bits (813), Expect = 7.560e-104
Identity = 154/225 (68.44%), Postives = 182/225 (80.89%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAEL 675
            ENFLEPYLFNGK+T+S MDVVS YVDQ PD DM+R+VA +Y I IY TI  ALC GGE+LAVD VL+IGEHG YP NEKGQ  YPRKRFFD IV VFR SGR VPV++DKHLSYRWD+A+EMYDTA+ M    MAGSSVPLAER PP+E+   A+I  AVSIH G VESYDFHG+EVLQ+M+E+R G ETG+  VQFL+G+ALW AA  GLWS+ +A+ A++ +L
Sbjct:   77 ENFLEPYLFNGKLTSSDMDVVSFYVDQSPDRDMAREVAAKYNIKIYRTIAGALCLGGEKLAVDGVLAIGEHGKYPINEKGQQEYPRKRFFDEIVAVFRRSGRVVPVYNDKHLSYRWDWAREMYDTARRMKIPFMAGSSVPLAERRPPVEIGRGARITDAVSIHSGPVESYDFHGLEVLQAMVESRRGAETGVTRVQFLQGEALWKAANDGLWSLELAQTALSTDL 301          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: UPI0019BEB1FE (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019BEB1FE)

HSP 1 Score: 314 bits (805), Expect = 3.690e-103
Identity = 157/227 (69.16%), Postives = 179/227 (78.85%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYP-DGDMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAELG 678
            ENFLEPY FNGK+T SG+DVVSLYVDQ+P  GDM+R+VAKQYGI I+PTI EAL  GG+ LAVD VLSIGEHGNYP  ++G  MYPRKRFFD IV VFR SGR VP+FSDKHLSYRWD+A EM   A+ +    MAGSSVPLA+R PPLELP  A IE AVS+H G  E YDFH +EVLQS+IE+R GGETG+ E+Q LEGDA+W AA  G WS  +AEAAM AE G
Sbjct:   57 ENFLEPYYFNGKLTESGIDVVSLYVDQFPASGDMAREVAKQYGIKIFPTIAEALRLGGKELAVDGVLSIGEHGNYPRTDRGVIMYPRKRFFDEIVAVFRQSGRIVPLFSDKHLSYRWDWADEMAQVARELKIPFMAGSSVPLAQRRPPLELPNQAVIEEAVSVHSGPPEVYDFHSLEVLQSLIESRRGGETGVSEIQLLEGDAVWQAAADGRWSYALAEAAMRAETG 283          
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Match: A0A3L7SB70_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SB70_9BACT)

HSP 1 Score: 313 bits (801), Expect = 2.070e-102
Identity = 153/227 (67.40%), Postives = 180/227 (79.30%), Query Frame = 1
Query:    1 ENFLEPYLFNGKITASGMDVVSLYVDQYPDG-DMSRDVAKQYGINIYPTIGEALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDSGRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLELPADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEGDALWNAAEKGLWSIPVAEAAMAAELG 678
            ENFLEPYLFNG++T  GMDVVSLYVDQ+P+G DM+RDVAKQYGI I+PTI  AL  GG  LAVD VLSIGEHGNYP NE+GQ MYPRKRFFD I  VFR+SGR VP+F+DKHLSYRWD++ EM   A  +    MAGSSVPLA+R PP E PA+  +  AVSIH GG+ESYDFH +EVLQS++E+R GGE+G+ EVQ LEG+A W AAE+G WS+ +A AAM A  G
Sbjct:   69 ENFLEPYLFNGQVTDPGMDVVSLYVDQFPEGRDMARDVAKQYGIEIFPTIAGALKRGGADLAVDGVLSIGEHGNYPLNERGQQMYPRKRFFDEIAAVFRESGRAVPLFNDKHLSYRWDWSAEMMQVAHELKIPFMAGSSVPLAQRRPPFEFPANEVLTEAVSIHSGGLESYDFHALEVLQSLVESRRGGESGVSEVQLLEGEAAWQAAEEGRWSLSLATAAMNAAEG 295          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99886.22973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V6BZQ7_9BACT4.470e-10868.78Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A7V5UL05_9PLAN2.160e-10669.47Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A2V6FVA8_9BACT4.060e-10668.44Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A538PB17_9BACT5.230e-10568.44Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A3E0P8R9_9BACT1.450e-10470.35Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E7L709_9PLAN4.160e-10466.37Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
UPI00029B10594.850e-10466.52hypothetical protein n=1 Tax=Schlesneria paludicol... [more]
A0A2V5UAT5_9BACT7.560e-10468.44Uncharacterized protein n=3 Tax=Verrucomicrobia ba... [more]
UPI0019BEB1FE3.690e-10369.16Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A3L7SB70_9BACT2.070e-10267.40Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99886contigM-pyrifera_M_contig99886:3..680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score320.9
Seed ortholog evalue4.9e-85
Seed eggNOG ortholog1123242.JH636435_gene2642
Hectar predicted targeting categoryother localisation
EggNOG OGs28KEJ@1,2IZ9S@203682,2ZA0T@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size678
Cds size678
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816916.2614496-CDS-M-pyrifera_M_contig99886:2..6801622816916.2614496-CDS-M-pyrifera_M_contig99886:2..680Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99886 3..680 +
1692278253.5771244-CDS-M-pyrifera_M_contig99886:2..6801692278253.5771244-CDS-M-pyrifera_M_contig99886:2..680Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99886 3..680 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99886.22973.1prot_M-pyrifera_M_contig99886.22973.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99886 3..680 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99886.22973.1

>prot_M-pyrifera_M_contig99886.22973.1 ID=prot_M-pyrifera_M_contig99886.22973.1|Name=mRNA_M-pyrifera_M_contig99886.22973.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
ENFLEPYLFNGKITASGMDVVSLYVDQYPDGDMSRDVAKQYGINIYPTIG
EALCDGGERLAVDAVLSIGEHGNYPHNEKGQHMYPRKRFFDGIVEVFRDS
GRTVPVFSDKHLSYRWDFAKEMYDTAQSMDFGLMAGSSVPLAERWPPLEL
PADAKIEAAVSIHGGGVESYDFHGVEVLQSMIEARAGGETGIQEVQFLEG
DALWNAAEKGLWSIPVAEAAMAAELG
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mRNA from alignment at M-pyrifera_M_contig99886:3..680+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99886.22973.1 ID=mRNA_M-pyrifera_M_contig99886.22973.1|Name=mRNA_M-pyrifera_M_contig99886.22973.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig99886:3..680+ (Macrocystis pyrifera P11B4 male)
GAAAACTTCCTCGAGCCGTATCTGTTTAACGGCAAGATTACGGCATCCGG CATGGACGTGGTCAGCTTGTATGTCGATCAGTATCCCGATGGTGATATGT CCCGGGATGTTGCCAAGCAGTACGGCATCAACATCTATCCCACCATCGGC GAAGCCCTGTGCGATGGCGGCGAACGGCTGGCGGTCGATGCAGTGCTTTC CATCGGCGAACACGGAAACTACCCGCACAACGAGAAGGGCCAGCACATGT ATCCGCGGAAGCGATTCTTCGACGGAATCGTGGAAGTATTTCGGGATAGC GGTCGCACGGTCCCCGTGTTCAGCGATAAGCATCTTTCCTACCGCTGGGA CTTTGCCAAGGAGATGTACGATACGGCTCAAAGTATGGACTTTGGTTTGA TGGCCGGCAGCTCGGTACCACTGGCCGAACGTTGGCCCCCCTTGGAATTG CCCGCGGATGCCAAAATCGAGGCCGCCGTTTCGATTCACGGGGGAGGTGT CGAATCGTACGATTTCCATGGAGTGGAAGTATTGCAGTCGATGATCGAAG CACGTGCCGGCGGCGAGACGGGCATCCAAGAGGTACAGTTCCTCGAAGGC GATGCTCTATGGAACGCGGCCGAAAAGGGGCTGTGGTCGATCCCCGTGGC AGAAGCAGCCATGGCTGCGGAACTGGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99886:3..680+

>mRNA_M-pyrifera_M_contig99886.22973.1 ID=mRNA_M-pyrifera_M_contig99886.22973.1|Name=mRNA_M-pyrifera_M_contig99886.22973.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig99886:3..680+ (Macrocystis pyrifera P11B4 male)
GAAAACTTCCTCGAGCCGTATCTGTTTAACGGCAAGATTACGGCATCCGG
CATGGACGTGGTCAGCTTGTATGTCGATCAGTATCCCGATGGTGATATGT
CCCGGGATGTTGCCAAGCAGTACGGCATCAACATCTATCCCACCATCGGC
GAAGCCCTGTGCGATGGCGGCGAACGGCTGGCGGTCGATGCAGTGCTTTC
CATCGGCGAACACGGAAACTACCCGCACAACGAGAAGGGCCAGCACATGT
ATCCGCGGAAGCGATTCTTCGACGGAATCGTGGAAGTATTTCGGGATAGC
GGTCGCACGGTCCCCGTGTTCAGCGATAAGCATCTTTCCTACCGCTGGGA
CTTTGCCAAGGAGATGTACGATACGGCTCAAAGTATGGACTTTGGTTTGA
TGGCCGGCAGCTCGGTACCACTGGCCGAACGTTGGCCCCCCTTGGAATTG
CCCGCGGATGCCAAAATCGAGGCCGCCGTTTCGATTCACGGGGGAGGTGT
CGAATCGTACGATTTCCATGGAGTGGAAGTATTGCAGTCGATGATCGAAG
CACGTGCCGGCGGCGAGACGGGCATCCAAGAGGTACAGTTCCTCGAAGGC
GATGCTCTATGGAACGCGGCCGAAAAGGGGCTGTGGTCGATCCCCGTGGC
AGAAGCAGCCATGGCTGCGGAACTGGGGGAAAACTTCCTCGAGCCGTATC
TGTTTAACGGCAAGATTACGGCATCCGGCATGGACGTGGTCAGCTTGTAT
GTCGATCAGTATCCCGATGGTGATATGTCCCGGGATGTTGCCAAGCAGTA
CGGCATCAACATCTATCCCACCATCGGCGAAGCCCTGTGCGATGGCGGCG
AACGGCTGGCGGTCGATGCAGTGCTTTCCATCGGCGAACACGGAAACTAC
CCGCACAACGAGAAGGGCCAGCACATGTATCCGCGGAAGCGATTCTTCGA
CGGAATCGTGGAAGTATTTCGGGATAGCGGTCGCACGGTCCCCGTGTTCA
GCGATAAGCATCTTTCCTACCGCTGGGACTTTGCCAAGGAGATGTACGAT
ACGGCTCAAAGTATGGACTTTGGTTTGATGGCCGGCAGCTCGGTACCACT
GGCCGAACGTTGGCCCCCCTTGGAATTGCCCGCGGATGCCAAAATCGAGG
CCGCCGTTTCGATTCACGGGGGAGGTGTCGAATCGTACGATTTCCATGGA
GTGGAAGTATTGCAGTCGATGATCGAAGCACGTGCCGGCGGCGAGACGGG
CATCCAAGAGGTACAGTTCCTCGAAGGCGATGCTCTATGGAACGCGGCCG
AAAAGGGGCTGTGGTCGATCCCCGTGGCAGAAGCAGCCATGGCTGCGGAA
CTGGGG
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