mRNA_M-pyrifera_M_contig99879.22969.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99879.22969.1
Unique NamemRNA_M-pyrifera_M_contig99879.22969.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A6I6AC59_9PLAN (PQQ-binding-like beta-propeller repeat protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AC59_9PLAN)

HSP 1 Score: 460 bits (1184), Expect = 9.460e-157
Identity = 224/227 (98.68%), Postives = 227/227 (100.00%), Query Frame = 1
Query:    1 GQSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            GQ+RDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLA+DQDEMQTFAGHQTRNFRAGHAL+VGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR
Sbjct:  167 GQARDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLANDQDEMQTFAGHQTRNFRAGHALNVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 393          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A518A0I6_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A0I6_9PLAN)

HSP 1 Score: 400 bits (1028), Expect = 2.870e-133
Identity = 196/227 (86.34%), Postives = 207/227 (91.19%), Query Frame = 1
Query:    1 GQSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            GQ+RDYWRKLLPP PG+    D GLFYYPDSDL VPPILARLILVS F+G+F++A AELAVFRERYP A GSLAG++GNLA+QLT ILSDR QVSL  DQ EMQTFAGHQTRNFR GH LDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVV+GEHVFINDSERIYALNWKTG PAWS+ DPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR
Sbjct:  167 GQARDYWRKLLPPPPGAEGVGDAGLFYYPDSDLPVPPILARLILVSFFQGDFERAAAELAVFRERYPQAVGSLAGQEGNLAEQLTKILSDRSQVSLPKDQREMQTFAGHQTRNFRVGHQLDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVNGEHVFINDSERIYALNWKTGAPAWSN-DPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 392          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A355GFP1_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GFP1_9PLAN)

HSP 1 Score: 303 bits (776), Expect = 1.240e-95
Identity = 146/226 (64.60%), Postives = 173/226 (76.55%), Query Frame = 1
Query:    4 QSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            ++R  WRKL+P     +   DTGLF+YPD+DL VP ILARLILVS F+GNF QA+ E   FR++YP A G LAGK+GNL+D L  IL+D  +VSL  ++ E++TFAGHQTRNF+A    ++GA  WSF VPLVWSQE+T KPAFG RVPPGLFPVVH EHVF ND+ERIY LNWKTG PAWS  DPQ+SPI+YPS      RLPFR VVGVPR+T T+A GRLYAR
Sbjct:  168 EARSLWRKLIPRTASDSPVYDTGLFHYPDTDLPVPEILARLILVSFFQGNFSQADFEQGQFRKKYPQATGRLAGKEGNLSDLLAEILADPSRVSLPDNRSELKTFAGHQTRNFKAAQPPEIGAVDWSFPVPLVWSQEFTAKPAFGFRVPPGLFPVVHQEHVFFNDAERIYGLNWKTGLPAWSQ-DPQSSPILYPSASHRVSRLPFRPVVGVPRYTSTIAGGRLYAR 392          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A518I6D9_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I6D9_9PLAN)

HSP 1 Score: 302 bits (773), Expect = 3.680e-95
Identity = 151/227 (66.52%), Postives = 176/227 (77.53%), Query Frame = 1
Query:    4 QSRDYWRKLLPPEPGSA-ARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            Q+R YWRKL+PP   +  ++ D G+F YPD+DL VP ILARL+LVS FEGNF++A  E  VFR+ YP+A G LAG++GNL   L+ IL DR  VSL   + EMQTFAGHQTRNFR    LDVGA AWSF+VPL W+QE+ RKPAF +RV PG +PVV GEHV+ ND ERIYALNWKTG PAWS+ + QASPIIYPSV  G  RLPFR VVGVPRFTMT+ADGRLYAR
Sbjct:  168 QARAYWRKLIPPAAMTQQSQYDPGVFLYPDTDLPVPSILARLVLVSFFEGNFERAALERDVFRKNYPEAIGMLAGREGNLVTILSTILEDRALVSLPATRLEMQTFAGHQTRNFRGAKKLDVGAIAWSFQVPLGWTQEFPRKPAFERRVSPGFYPVVDGEHVYFNDDERIYALNWKTGLPAWSEGE-QASPIIYPSVPGGTPRLPFRPVVGVPRFTMTIADGRLYAR 393          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A517WTF9_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTF9_9PLAN)

HSP 1 Score: 300 bits (769), Expect = 1.350e-94
Identity = 150/226 (66.37%), Postives = 173/226 (76.55%), Query Frame = 1
Query:    4 QSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            Q+R +WRKL+P        S+ G+F YPD+DLSVP ILARLILVS FEGNFK+AE EL VFR+RYP A GSLAGK GN    L+ ILS+R  VSL     EM TFAGHQTRN+RA   +DVGA AWSFR+P   +QE+TRKPAF Q V PG+FPVVH +HVF ND+ERIYALNWK+G PAWS  D  ASP+IYPSVL G  R PFR VVGVPRFTMT+++GRLYAR
Sbjct:  168 QARAHWRKLIPVSNAEKQGSNPGVFLYPDTDLSVPEILARLILVSFFEGNFKRAEFELNVFRKRYPQAAGSLAGKGGNFVALLSDILSNRALVSLPDSTTEMLTFAGHQTRNYRAEKKVDVGAVAWSFRIPRTGNQEFTRKPAFKQAVAPGIFPVVHRDHVFFNDAERIYALNWKSGLPAWS-TDQNASPVIYPSVLGGFFRKPFRPVVGVPRFTMTISEGRLYAR 392          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A6CFB7_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris DSM 8797 TaxID=344747 RepID=A6CFB7_9PLAN)

HSP 1 Score: 293 bits (751), Expect = 2.070e-94
Identity = 141/226 (62.39%), Postives = 170/226 (75.22%), Query Frame = 1
Query:    4 QSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            ++R  WRKL+P     +   D GLF+YPD+DL VP ILARLILVS FEGNF QA+ E   FR+++P+ +G LAGK+GNL+  L  IL+D  QVSL  +Q E++TFAGHQ+RNF+A    D+GA AW F VP+VWSQE+T KPAFG RVPPGLFPVVH EHVF ND+ERIY LNWKTG PAWS    ++SPI+YPS      RLPFR VVGVPR+T T+A GRLYAR
Sbjct:  168 EARSCWRKLIPRTASDSPVYDAGLFHYPDTDLPVPEILARLILVSFFEGNFSQADFEYRQFRKKFPETDGKLAGKEGNLSALLAEILADHSQVSLPANQGEIKTFAGHQSRNFKAAQQPDIGAIAWRFPVPMVWSQEFTAKPAFGLRVPPGLFPVVHQEHVFFNDAERIYGLNWKTGLPAWSQGQ-ESSPILYPSDSHLVARLPFRPVVGVPRYTSTIAGGRLYAR 392          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A517R9C0_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9C0_9PLAN)

HSP 1 Score: 299 bits (765), Expect = 5.670e-94
Identity = 150/227 (66.08%), Postives = 175/227 (77.09%), Query Frame = 1
Query:    4 QSRDYWRKLLPP-EPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            Q+R YWRKL+PP +     + D G+F YPD+DL +P ILARL+LVS FEGN ++A  E  VFR++YP+A G+LAG++GNLA  LT IL+D  QVSL   + EMQTFAG Q RNF A   LDVGA AWSF VPL WSQE+ RKPAF QR+ PGLFPVV GEHV+ ND ERIYALNWK+G PAWS  + QASPIIYP+V  G  RLPFR VVGVPRFTMT+ADGRLYAR
Sbjct:  168 QARAYWRKLIPPTDAAPRGQYDPGVFLYPDTDLPIPSILARLVLVSFFEGNIERAALERDVFRKKYPEATGTLAGQKGNLAAILTSILADPSQVSLPATRLEMQTFAGDQRRNFSAEKKLDVGAIAWSFPVPLNWSQEFPRKPAFAQRISPGLFPVVSGEHVYFNDDERIYALNWKSGLPAWSGEE-QASPIIYPTVPGGTSRLPFRPVVGVPRFTMTIADGRLYAR 393          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A517ZMA9_9PLAN (Outer membrane biogenesis protein BamB n=3 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZMA9_9PLAN)

HSP 1 Score: 149 bits (375), Expect = 1.670e-37
Identity = 83/228 (36.40%), Postives = 126/228 (55.26%), Query Frame = 1
Query:    1 GQSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALD-VGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            G +R YW   LP EP  +A     +  YPD+DL +  + ARL++ SLF+ +  + E ELA F  R+ DAEG+LAG+ G L++ LT +  +    + +  + ++ TFAG+ +RN     A+D +GA  W+  +P     + +R+    + V    FPV  G+ +FIND+  + A +  TG PAW   +   + I     L G +R      VG+PR+TMTV DGRLY R
Sbjct:  168 GDARGYWEMTLPIEPPQSAGDPRTVLTYPDTDLDLAELRARLVMCSLFQRDLPRFEQELAAFTMRHSDAEGTLAGRTGRLSEILTTLAEEAEHWTQSTAEKDVSTFAGNTSRNAVLPQAIDDIGAVQWTHPLPPAAPDKMSRRGRLAKPVYLSYFPVTVGDTLFINDATTVSAYDLLTGKPAWPSPNSNDAVIYRTLPLFGNLRGKENEQVGIPRYTMTVHDGRLYVR 395          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: A0A5C6BCF5_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6BCF5_9PLAN)

HSP 1 Score: 146 bits (369), Expect = 1.060e-36
Identity = 86/235 (36.60%), Postives = 131/235 (55.74%), Query Frame = 1
Query:    1 GQSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALD-VGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPF-------RSVVGVPRFTMTVADGRLYAR 681
            G +R YW   LP EP   AR    +  YPD+DL +  + ARL++ SLF+ +  + E ELA F  R+ DAEG+LAG+ G L++ L  +  +    + +    ++ TFAG+ +RN     A+D +GA  W+  +P     E +R+    + V    FPV+ G+ +F+ND+  + A +  TG PAWS       P  + +V+  A+R PF        + +G+PR+TMTV DGRLYAR
Sbjct:  168 GDARGYWEMTLPIEPPRPARDPLTVLTYPDTDLDLAEMRARLVMCSLFQRDLPRFEQELAAFTLRHSDAEGTLAGRTGQLSEILKTLAEEAQHWTDSTTDSDVSTFAGNASRNAVLPQAIDDIGAVQWTHPLPPAAHAEKSRRGGLAKPVYLSYFPVIVGDTLFVNDATTVSAYDLLTGKPAWS------GPNSHDAVIYRALR-PFGNQRDKKNARMGIPRYTMTVHDGRLYAR 395          
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Match: UPI001989A8B0 (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI001989A8B0)

HSP 1 Score: 134 bits (338), Expect = 1.070e-32
Identity = 88/225 (39.11%), Postives = 116/225 (51.56%), Query Frame = 1
Query:    7 SRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEGNFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQDEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVPPGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQGAVRLPFRSVVGVPRFTMTVADGRLYAR 681
            SR +W +L+P    S A S   +  YPDS+L    ++ARL+L SL EG+ ++A  +   F ERYP A G+LAG+QG L + L  IL +      A D+ E+ TF     R       +DVGA  W   +         R  +   R P    PVV  + V +ND++ I A N  TG PAW      A   IYP V +     P R  VGVP FTMTVADG+L+AR
Sbjct:  153 SRLHWSQLVPLTEESRAASLPTVLRYPDSNLDAASVVARLVLCSLMEGHRERAIDQQQHFAERYPMARGNLAGRQGRLTEILKQILDEAAAWDAASDEAEVATFGLAPERTQILPSVVDVGAPRWQQPLTPNLLPPLERFRSAPDRGPLSTHPVVFRDIVLVNDADAISAFNLLTGEPAWPTERGTAR--IYPPVSEERSGAPDRICVGVPWFTMTVADGKLFAR 375          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99879.22969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AC59_9PLAN9.460e-15798.68PQQ-binding-like beta-propeller repeat protein n=6... [more]
A0A518A0I6_9PLAN2.870e-13386.34Outer membrane biogenesis protein BamB n=2 Tax=Gim... [more]
A0A355GFP1_9PLAN1.240e-9564.60Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A518I6D9_9PLAN3.680e-9566.52Outer membrane biogenesis protein BamB n=1 Tax=Gim... [more]
A0A517WTF9_9PLAN1.350e-9466.37Outer membrane biogenesis protein BamB n=2 Tax=Gim... [more]
A6CFB7_9PLAN2.070e-9462.39Uncharacterized protein n=1 Tax=Gimesia maris DSM ... [more]
A0A517R9C0_9PLAN5.670e-9466.08Outer membrane biogenesis protein BamB n=1 Tax=Gim... [more]
A0A517ZMA9_9PLAN1.670e-3736.40Outer membrane biogenesis protein BamB n=3 Tax=Sym... [more]
A0A5C6BCF5_9PLAN1.060e-3636.60Outer membrane biogenesis protein BamB n=2 Tax=Sym... [more]
UPI001989A8B01.070e-3239.11PQQ-binding-like beta-propeller repeat protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99879contigM-pyrifera_M_contig99879:3..683 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score295.8
Seed ortholog evalue1.7e-77
Seed eggNOG ortholog344747.PM8797T_06757
KEGG koko:K05889
KEGG ReactionR03136
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PQQ-like domain
EggNOG OGs2IZ2Z@203682,COG1520@1,COG1520@2
EC1.1.2.6
COG Functional cat.H
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size681
Cds size681
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816916.1103063-CDS-M-pyrifera_M_contig99879:2..6831622816916.1103063-CDS-M-pyrifera_M_contig99879:2..683Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99879 3..683 +
1692278253.5175068-CDS-M-pyrifera_M_contig99879:2..6831692278253.5175068-CDS-M-pyrifera_M_contig99879:2..683Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99879 3..683 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99879.22969.1prot_M-pyrifera_M_contig99879.22969.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99879 3..683 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99879.22969.1

>prot_M-pyrifera_M_contig99879.22969.1 ID=prot_M-pyrifera_M_contig99879.22969.1|Name=mRNA_M-pyrifera_M_contig99879.22969.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp
GQSRDYWRKLLPPEPGSAARSDTGLFYYPDSDLSVPPILARLILVSLFEG
NFKQAEAELAVFRERYPDAEGSLAGKQGNLADQLTGILSDRGQVSLAHDQ
DEMQTFAGHQTRNFRAGHALDVGAAAWSFRVPLVWSQEYTRKPAFGQRVP
PGLFPVVHGEHVFINDSERIYALNWKTGTPAWSDADPQASPIIYPSVLQG
AVRLPFRSVVGVPRFTMTVADGRLYAR
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mRNA from alignment at M-pyrifera_M_contig99879:3..683+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99879.22969.1 ID=mRNA_M-pyrifera_M_contig99879.22969.1|Name=mRNA_M-pyrifera_M_contig99879.22969.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig99879:3..683+ (Macrocystis pyrifera P11B4 male)
GGACAGTCGCGGGATTACTGGCGGAAACTGCTACCGCCTGAACCGGGATC TGCAGCGCGCAGTGATACCGGACTCTTCTATTATCCCGATTCCGATTTAT CTGTACCCCCGATTCTGGCGCGTCTGATTCTGGTCAGTCTATTCGAGGGA AATTTCAAACAGGCTGAAGCGGAACTGGCTGTGTTTCGCGAGCGGTATCC CGATGCGGAAGGCTCACTCGCCGGTAAGCAGGGGAACCTGGCAGACCAAC TTACAGGAATTCTATCAGATCGCGGTCAGGTCTCACTGGCGCATGATCAA GACGAAATGCAGACCTTTGCCGGACACCAGACCCGTAATTTCCGGGCCGG ACATGCTCTGGACGTCGGGGCCGCAGCCTGGTCTTTTCGTGTGCCTCTGG TCTGGAGCCAGGAATACACGCGGAAACCTGCCTTTGGTCAACGCGTGCCG CCGGGACTCTTCCCTGTTGTACATGGGGAGCATGTTTTTATTAATGACTC AGAACGCATTTATGCACTCAACTGGAAGACAGGAACACCCGCCTGGTCTG ACGCGGATCCTCAGGCGAGTCCGATTATATATCCTTCCGTTCTACAGGGG GCAGTCAGACTGCCGTTTCGTTCCGTCGTGGGAGTCCCCCGGTTTACGAT GACTGTTGCCGACGGACGGTTATACGCCCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99879:3..683+

>mRNA_M-pyrifera_M_contig99879.22969.1 ID=mRNA_M-pyrifera_M_contig99879.22969.1|Name=mRNA_M-pyrifera_M_contig99879.22969.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig99879:3..683+ (Macrocystis pyrifera P11B4 male)
GGACAGTCGCGGGATTACTGGCGGAAACTGCTACCGCCTGAACCGGGATC
TGCAGCGCGCAGTGATACCGGACTCTTCTATTATCCCGATTCCGATTTAT
CTGTACCCCCGATTCTGGCGCGTCTGATTCTGGTCAGTCTATTCGAGGGA
AATTTCAAACAGGCTGAAGCGGAACTGGCTGTGTTTCGCGAGCGGTATCC
CGATGCGGAAGGCTCACTCGCCGGTAAGCAGGGGAACCTGGCAGACCAAC
TTACAGGAATTCTATCAGATCGCGGTCAGGTCTCACTGGCGCATGATCAA
GACGAAATGCAGACCTTTGCCGGACACCAGACCCGTAATTTCCGGGCCGG
ACATGCTCTGGACGTCGGGGCCGCAGCCTGGTCTTTTCGTGTGCCTCTGG
TCTGGAGCCAGGAATACACGCGGAAACCTGCCTTTGGTCAACGCGTGCCG
CCGGGACTCTTCCCTGTTGTACATGGGGAGCATGTTTTTATTAATGACTC
AGAACGCATTTATGCACTCAACTGGAAGACAGGAACACCCGCCTGGTCTG
ACGCGGATCCTCAGGCGAGTCCGATTATATATCCTTCCGTTCTACAGGGG
GCAGTCAGACTGCCGTTTCGTTCCGTCGTGGGAGTCCCCCGGTTTACGAT
GACTGTTGCCGACGGACGGTTATACGCCCGCGGACAGTCGCGGGATTACT
GGCGGAAACTGCTACCGCCTGAACCGGGATCTGCAGCGCGCAGTGATACC
GGACTCTTCTATTATCCCGATTCCGATTTATCTGTACCCCCGATTCTGGC
GCGTCTGATTCTGGTCAGTCTATTCGAGGGAAATTTCAAACAGGCTGAAG
CGGAACTGGCTGTGTTTCGCGAGCGGTATCCCGATGCGGAAGGCTCACTC
GCCGGTAAGCAGGGGAACCTGGCAGACCAACTTACAGGAATTCTATCAGA
TCGCGGTCAGGTCTCACTGGCGCATGATCAAGACGAAATGCAGACCTTTG
CCGGACACCAGACCCGTAATTTCCGGGCCGGACATGCTCTGGACGTCGGG
GCCGCAGCCTGGTCTTTTCGTGTGCCTCTGGTCTGGAGCCAGGAATACAC
GCGGAAACCTGCCTTTGGTCAACGCGTGCCGCCGGGACTCTTCCCTGTTG
TACATGGGGAGCATGTTTTTATTAATGACTCAGAACGCATTTATGCACTC
AACTGGAAGACAGGAACACCCGCCTGGTCTGACGCGGATCCTCAGGCGAG
TCCGATTATATATCCTTCCGTTCTACAGGGGGCAGTCAGACTGCCGTTTC
GTTCCGTCGTGGGAGTCCCCCGGTTTACGATGACTGTTGCCGACGGACGG
TTATACGCCCGC
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