mRNA_M-pyrifera_M_contig99876.22968.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99876.22968.1
Unique NamemRNA_M-pyrifera_M_contig99876.22968.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A3R7KPY7_9STRA (CTP_transf_like domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KPY7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.490e-12
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 1 
Query:    1 MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            + Y   EH D+   D VVLGGTFDH H GH KLLS+A ++  +++++GVT   ML+KK++ + +EP + R
Sbjct:  200 VNYFENEHADLAPHDLVVLGGTFDHLHNGHKKLLSLAVSICAQRILIGVTADSMLTKKSNAELLEPLERR 269
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BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A3M6VHG1_9STRA (CTP_transf_like domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHG1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.150e-11
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 1 
Query:   19 EHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            EH D+   D V+LGGTFDH H GH KLLS+A ++  K+++VGVT   ML +KA  + +EP + R
Sbjct:  202 EHADLTPHDLVILGGTFDHLHNGHKKLLSLAVSICAKRMIVGVTADSMLKEKAHAELLEPMEKR 265
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BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: I4YB44_WALMC (Nucleotidylyl transferase n=4 Tax=Wallemia mellicola TaxID=1708541 RepID=I4YB44_WALMC)

HSP 1 Score: 67.4 bits (163), Expect = 1.190e-11
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:   34 GQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            G  D + LGGTFDH HAGH  LL++A  +++KKVV+GVTG D+L++K D D +E  + R
Sbjct:  145 GIYDTIALGGTFDHLHAGHKVLLTLAAYISRKKVVIGVTGPDLLTRKNDADVLESIETR 203
[Close]
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: K3WA21_GLOUD (CTP_transf_like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA21_GLOUD)

HSP 1 Score: 67.4 bits (163), Expect = 1.630e-11
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:    4 EYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            +Y   EH D+   D V+LGGTFDH H GH KLLS+A ++  +K+++GVT   ML+KK+  + +EP + R
Sbjct:  203 KYFENEHTDLKPHDMVILGGTFDHLHNGHKKLLSLAASICARKMIIGVTADVMLTKKSHAELIEPLEKR 271
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BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A6A3X4U1_9STRA (CTP_transf_like domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X4U1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.710e-11
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:    1 MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            + Y   EH D+   D VVLGGTFDH H GH KLLS+A ++  ++++VGVT + ML KK+  + +EP + R
Sbjct:  197 VNYFENEHADLTPHDLVVLGGTFDHLHNGHKKLLSLAVSICARRILVGVTANSMLKKKSHAELVEPLERR 266
[Close]
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A0W8BYM7_PHYNI (CTP_transf_like domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BYM7_PHYNI)

HSP 1 Score: 67.0 bits (162), Expect = 2.200e-11
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:    1 MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            ++Y   EH D+   D V+LGGTFDH H GH KLLS+A ++   +++VGVT  +ML KK+  + +EP + R
Sbjct:  199 IKYFENEHADLTPHDLVILGGTFDHLHNGHKKLLSLAVSICANRILVGVTADNMLKKKSHAELLEPLEKR 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A2P4YT21_9STRA (Cytidylyltransferase (Predicted) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YT21_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.000e-11
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 1 
Query:    1 MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            + Y   EH D+   D V+LGGTFDH H GH KLLS+A ++   ++++GVT   ML KKA  + +EP + R
Sbjct:  197 VSYFENEHADLTPHDLVILGGTFDHLHNGHKKLLSLAVSICAHRMIIGVTADSMLKKKAHAELLEPLEKR 266
[Close]
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A662YAB0_9STRA (CTP_transf_like domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAB0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.080e-11
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:    1 MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            + Y   EH D+   D V+LGGTFDH H GH KLLS+A +++ + ++VGVT   ML+KK+  + +EP + R
Sbjct:  207 VHYFENEHTDLTPHDLVILGGTFDHLHNGHKKLLSLAASISARGILVGVTADSMLTKKSHAELLEPLEQR 276
[Close]
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: A0A7S1A2R5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A2R5_NOCSC)

HSP 1 Score: 65.5 bits (158), Expect = 8.670e-11
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:   49 VVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            VVLGGTFDH HAGH  LLS++ A+A+  V VGV+G  +L KK     +EPWDVR
Sbjct:  110 VVLGGTFDHLHAGHKVLLSVSVALAEVGVAVGVSGAPLLVKKHHATELEPWDVR 163
[Close]
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Match: G4YI74_PHYSP (CTP_transf_like domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YI74_PHYSP)

HSP 1 Score: 64.7 bits (156), Expect = 1.610e-10
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1 
Query:    1 MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVTGHDMLSKKADVDRMEPWDVR 210
            + Y   EH D+   D V+LGGTFDH H GH KLLS+A ++  + +++GVT   ML KK+  + +EP + R
Sbjct:  292 VNYFENEHADLTPHDLVILGGTFDHLHNGHKKLLSLAVSICARHILIGVTADSMLKKKSHAELVEPLERR 361
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99876.22968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3R7KPY7_9STRA8.490e-1245.71CTP_transf_like domain-containing protein n=3 Tax=... [more]
A0A3M6VHG1_9STRA1.150e-1150.00CTP_transf_like domain-containing protein n=2 Tax=... [more]
I4YB44_WALMC1.190e-1152.54Nucleotidylyl transferase n=4 Tax=Wallemia mellico... [more]
K3WA21_GLOUD1.630e-1146.38CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A6A3X4U1_9STRA1.710e-1147.14CTP_transf_like domain-containing protein n=6 Tax=... [more]
A0A0W8BYM7_PHYNI2.200e-1145.71CTP_transf_like domain-containing protein n=13 Tax... [more]
A0A2P4YT21_9STRA3.000e-1145.71Cytidylyltransferase (Predicted) n=2 Tax=Phytophth... [more]
A0A662YAB0_9STRA3.080e-1145.71CTP_transf_like domain-containing protein n=2 Tax=... [more]
A0A7S1A2R5_NOCSC8.670e-1159.26Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
G4YI74_PHYSP1.610e-1044.29CTP_transf_like domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99876contigM-pyrifera_M_contig99876:12..221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score67.8
Seed ortholog evalue2.3e-09
Seed eggNOG ortholog36331.EPrPI00000024341
Preferred nameCOASY
KEGG rclassRC00002,RC00078
KEGG koko:K02201,ko:K02318,ko:K08486,ko:K11374
KEGG ReactionR00130,R03035
KEGG Pathwayko00770,ko01100,ko04130,ko04721,map00770,map01100,map04130,map04721
KEGG ModuleM00120
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000149,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004140,GO:0004595,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006629,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006906,GO:0006928,GO:0006950,GO:0006970,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007300,GO:0007303,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009628,GO:0009651,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009987,GO:0010631,GO:0010876,GO:0012505,GO:0015936,GO:0015937,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016301,GO:0016310,GO:0016477,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019867,GO:0019915,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0030154,GO:0030707,GO:0030808,GO:0030855,GO:0031090,GO:0031201,GO:0031224,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032991,GO:0033036,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040007,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046903,GO:0046907,GO:0048278,GO:0048284,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051174,GO:0051179,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0051234,GO:0051235,GO:0051640,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0061024,GO:0061025,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070566,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0080020,GO:0080090,GO:0090130,GO:0090132,GO:0090174,GO:0090407,GO:0098588,GO:0098796,GO:0098805,GO:0140056,GO:1900371,GO:1900542,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990143
EggNOG free text desc.Bifunctional phosphopantetheine adenylyl transferase dephospho CoA kinase. Source PGD
EggNOG OGs1MDNH@121069,COG1019@1,KOG3351@2759
EC2.7.1.24,2.7.7.3
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03036,ko04131,ko04147
Exons1
Model size210
Cds size210
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816916.064429-CDS-M-pyrifera_M_contig99876:11..2211622816916.064429-CDS-M-pyrifera_M_contig99876:11..221Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99876 12..221 -
1692278253.4989305-CDS-M-pyrifera_M_contig99876:11..2211692278253.4989305-CDS-M-pyrifera_M_contig99876:11..221Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99876 12..221 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99876.22968.1prot_M-pyrifera_M_contig99876.22968.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99876 12..221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99876.22968.1

>prot_M-pyrifera_M_contig99876.22968.1 ID=prot_M-pyrifera_M_contig99876.22968.1|Name=mRNA_M-pyrifera_M_contig99876.22968.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
MEYRLVEHGDVGQVDGVVLGGTFDHAHAGHVKLLSIAGAVAKKKVVVGVT
GHDMLSKKADVDRMEPWDVR
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mRNA from alignment at M-pyrifera_M_contig99876:12..221-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99876.22968.1 ID=mRNA_M-pyrifera_M_contig99876.22968.1|Name=mRNA_M-pyrifera_M_contig99876.22968.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig99876:12..221- (Macrocystis pyrifera P11B4 male)
ATGGAGTATCGGCTGGTAGAACATGGAGATGTAGGACAAGTGGATGGGGT
AGTATTGGGTGGAACTTTTGATCATGCACATGCTGGTCATGTGAAGCTTT
TGTCCATCGCTGGAGCTGTAGCCAAGAAAAAGGTTGTGGTGGGAGTGACA
GGTCATGACATGCTCTCGAAGAAAGCTGATGTAGACAGAATGGAGCCATG
GGATGTGAGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99876:12..221-

>mRNA_M-pyrifera_M_contig99876.22968.1 ID=mRNA_M-pyrifera_M_contig99876.22968.1|Name=mRNA_M-pyrifera_M_contig99876.22968.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig99876:12..221- (Macrocystis pyrifera P11B4 male)
ATGGAGTATCGGCTGGTAGAACATGGAGATGTAGGACAAGTGGATGGGGT
AGTATTGGGTGGAACTTTTGATCATGCACATGCTGGTCATGTGAAGCTTT
TGTCCATCGCTGGAGCTGTAGCCAAGAAAAAGGTTGTGGTGGGAGTGACA
GGTCATGACATGCTCTCGAAGAAAGCTGATGTAGACAGAATGGAGCCATG
GGATGTGAGAATGGAGTATCGGCTGGTAGAACATGGAGATGTAGGACAAG
TGGATGGGGTAGTATTGGGTGGAACTTTTGATCATGCACATGCTGGTCAT
GTGAAGCTTTTGTCCATCGCTGGAGCTGTAGCCAAGAAAAAGGTTGTGGT
GGGAGTGACAGGTCATGACATGCTCTCGAAGAAAGCTGATGTAGACAGAA
TGGAGCCATGGGATGTGAGA
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